Gene: Cc04_g00540

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc04_g00540
  • Transcript Identifier Cc04_g00540.1
  • Gene Type Coding gene
  • Location chr4 : 412113-419155 : negative

Gene Family Information

  • ID HOM05D002360
  • #Genes/#Species 288/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB D1LZY8
  • UniProtKB P28553
  • UniProtKB P28554
  • UniProtKB P80093
  • UniProtKB Q1KMK7
  • UniProtKB D7TZI5
  • id GSCOCG00021672001

Descriptions

  • Description Phytoene dehydrogenase, chloroplastic/chromoplastic
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016117
IEA
InterProcarotenoid biosynthetic process
GO:0016120
ISO
PLAZA Integrative Orthologycarotene biosynthetic process Solyc03g123760.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IEA
InterProoxidoreductase activity
GO:0016166
IEA
InterProphytoene dehydrogenase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G14210
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT4G14210
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT4G14210

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002937 Amine oxidase
IPR001613 Flavin amine oxidase
IPR036188 FAD/NAD(P)-binding domain superfamily
IPR014102 Phytoene desaturase
Mapman id Description
9.1.6.1.2 Secondary metabolism.terpenoids.carotenoid biosynthesis.carotenes.phytoene desaturase (PDS)