Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold355G49768 Striga asiatica HOM05D001719 ORTHO05D400944 2.4e-113 412.1 202 100.0
SGA_v2.0_scaffold32G12995 Striga asiatica HOM05D001719 ORTHO05D008373 3.5e-32 142.5 148 56.8
MSTRG.20220 Avicennia marina HOM05D001719 ORTHO05D008373 6.9e-28 128.3 148 50.7
Migut.B00447 Erythranthe guttata HOM05D001719 ORTHO05D008373 9.0e-28 127.9 148 50.7
Sopen01g049310 Solanum pennellii HOM05D001719 ORTHO05D008373 7.6e-27 124.8 148 50.0
PGSC0003DMG400025840 Solanum tuberosum HOM05D001719 ORTHO05D008373 9.9e-27 124.4 148 50.0
SalBow6G1197 Salvia bowleyana HOM05D001719 ORTHO05D008373 1.7e-26 123.6 148 49.3
Solyc01g107040.3 Solanum lycopersicum HOM05D001719 ORTHO05D008373 1.7e-26 123.6 148 49.3
Oeu037281.1 Olea europaea HOM05D001719 ORTHO05D008373 2.2e-26 123.2 148 49.3
Peaxi162Scf00016g02843 Petunia axillaris HOM05D001719 ORTHO05D008373 4.9e-26 122.1 148 49.3
Cfa004629 Carpinus fangiana HOM05D001719 ORTHO05D008373 1.4e-25 120.6 148 48.6
Nitab4.5_0001105g0040 Nicotiana tabacum HOM05D001719 ORTHO05D008373 1.4e-25 120.6 148 48.6
CAN.G606.57 Capsicum annuum HOM05D001719 ORTHO05D008373 1.9e-25 120.2 148 49.3
unitig_0.g884 Utricularia gibba HOM05D001719 ORTHO05D008373 2.4e-25 119.8 148 48.0
Cc02_g19830 Coffea canephora HOM05D001719 ORTHO05D008373 4.2e-25 119.0 148 48.6
Lsat_1_v5_gn_7_85141 Lactuca sativa HOM05D001719 ORTHO05D008373 4.2e-25 119.0 148 49.3
ECA236G5137 Erigeron canadensis HOM05D001719 ORTHO05D008373 5.4e-25 118.6 148 48.6
Hma1.2p1_1059F.1_g252950 Hydrangea macrophylla HOM05D001719 ORTHO05D008373 7.1e-25 118.2 148 48.0
Nitab4.5_0008075g0010 Nicotiana tabacum HOM05D001719 ORTHO05D008373 9.3e-25 117.9 169 42.6
HanXRQChr16g0509301 Helianthus annuus HOM05D001719 ORTHO05D008373 1.2e-24 117.5 148 48.0
Dinv15804 Davidia involucrata HOM05D001719 ORTHO05D008373 1.6e-24 117.1 146 47.9
Duzib132G0579 Durio zibethinus HOM05D001719 ORTHO05D008373 2.1e-24 116.7 148 47.3
Sabra16G0184000 Salix brachista HOM05D001719 ORTHO05D008373 2.7e-24 116.3 148 48.0
Rhsim11G0153000 Rhododendron simsii HOM05D001719 ORTHO05D008373 3.5e-24 115.9 148 46.6
Rhsim11G0151200 Rhododendron simsii HOM05D001719 ORTHO05D008373 6.0e-24 115.2 148 45.9
THA.LOC104825385 Tarenaya hassleriana HOM05D001719 ORTHO05D008373 6.0e-24 115.2 147 44.9
Ciclev10028673m.g Citrus clementina HOM05D001719 ORTHO05D008373 7.9e-24 114.8 148 45.3
FvH4_2g04300 Fragaria vesca HOM05D001719 ORTHO05D008373 7.9e-24 114.8 148 45.9
FAN15G0793 Fragaria x ananassa HOM05D001719 ORTHO05D008373 7.9e-24 114.8 148 45.9
FAN24G2126 Fragaria x ananassa HOM05D001719 ORTHO05D008373 7.9e-24 114.8 148 45.9
Lj9A327T33 Lonicera japonica HOM05D001719 ORTHO05D008373 7.9e-24 114.8 148 46.6
Manes.10G081800 Manihot esculenta HOM05D001719 ORTHO05D008373 7.9e-24 114.8 148 46.6
Hund12567 Selenicereus undatus HOM05D001719 ORTHO05D008373 7.9e-24 114.8 148 46.6
PGR031G2413 Punica granatum HOM05D001719 ORTHO05D008373 1.0e-23 114.4 148 46.6
DCAR_001697 Daucus carota HOM05D001719 ORTHO05D008373 1.3e-23 114.0 148 45.9
Gohir.A03G182600 Gossypium hirsutum HOM05D001719 ORTHO05D008373 1.3e-23 114.0 148 46.6
Gohir.D02G204200 Gossypium hirsutum HOM05D001719 ORTHO05D008373 1.3e-23 114.0 148 46.6
Haze_10224 Corylus avellana HOM05D001719 ORTHO05D008373 1.8e-23 113.6 148 46.6
MBI16_g01206_MAGBIO Magnolia biondii HOM05D001719 ORTHO05D008373 2.3e-23 113.2 147 48.3
Thecc.02G116700 Theobroma cacao HOM05D001719 ORTHO05D008373 2.3e-23 113.2 148 46.6
GSVIVG01037840001 Vitis vinifera HOM05D001719 ORTHO05D008373 2.3e-23 113.2 148 45.9
CsaV3_7G007820 Cucumis sativus L. HOM05D001719 ORTHO05D008373 3.0e-23 112.8 148 45.3
RcHm_v2.0_Chr6g0253741 Rosa chinensis HOM05D001719 ORTHO05D008373 3.0e-23 112.8 148 45.3
CSS0031263 Camellia sinensis var. sinensis HOM05D001719 ORTHO05D008373 3.9e-23 112.5 148 45.9
Cpa.g.sc106.52 Carica papaya HOM05D001719 ORTHO05D008373 6.7e-23 111.7 148 45.3
Nn5g30572 Nelumbo nucifera HOM05D001719 ORTHO05D008373 6.7e-23 111.7 148 45.9
Potri.001G294900 Populus trichocarpa HOM05D001719 ORTHO05D008373 6.7e-23 111.7 148 45.3
Actinidia34362 Actinidia chinensis HOM05D001719 ORTHO05D008373 8.7e-23 111.3 148 44.6
MELO3C018520.2 Cucumis melo HOM05D001719 ORTHO05D008373 8.7e-23 111.3 148 44.6
FAN20G1654 Fragaria x ananassa HOM05D001719 ORTHO05D008373 8.7e-23 111.3 148 44.6
FAN27G0426 Fragaria x ananassa HOM05D001719 ORTHO05D008373 8.7e-23 111.3 148 45.3
Gorai.005G231500 Gossypium raimondii HOM05D001719 ORTHO05D008373 8.7e-23 111.3 148 45.3
MD10G1105300 Malus domestica HOM05D001719 ORTHO05D008373 8.7e-23 111.3 148 45.3
Prupe.8G144200 Prunus persica HOM05D001719 ORTHO05D008373 8.7e-23 111.3 148 45.9
CDE05G3484 Ceratophyllum demersum HOM05D001719 ORTHO05D008373 1.1e-22 110.9 148 43.9
COL.COLO4_32517 Corchorus olitorius HOM05D001719 ORTHO05D008373 1.1e-22 110.9 148 46.6
AT3G19630 Arabidopsis thaliana HOM05D001719 ORTHO05D008373 2.5e-22 109.8 148 43.2
CiPaw.05G017600 Carya illinoinensis HOM05D001719 ORTHO05D008373 2.5e-22 109.8 148 45.3
ClCG02G006820 Citrullus lanatus HOM05D001719 ORTHO05D008373 2.5e-22 109.8 150 44.0
vmacro01964 Vaccinium macrocarpon HOM05D001719 ORTHO05D008373 2.5e-22 109.8 146 45.2
Atru.chr5.2358 Acer truncatum HOM05D001719 ORTHO05D008373 3.3e-22 109.4 148 45.3
AL3G33070 Arabidopsis lyrata HOM05D001719 ORTHO05D008373 3.3e-22 109.4 148 43.2
TAR376G0701 Trochodendron aralioides HOM05D001719 ORTHO05D008373 3.3e-22 109.4 148 43.9
Carub.0003s1950 Capsella rubella HOM05D001719 ORTHO05D008373 4.3e-22 109.0 148 42.6
Eucgr.I01063 Eucalyptus grandis HOM05D001719 ORTHO05D008373 5.6e-22 108.6 148 45.3
ATR1153G087 Amborella trichopoda HOM05D001719 ORTHO05D008373 7.4e-22 108.2 148 42.6
CDE05G1870 Ceratophyllum demersum HOM05D001719 ORTHO05D008373 7.4e-22 108.2 148 43.2
Phvul.002G051800 Phaseolus vulgaris HOM05D001719 ORTHO05D008373 9.6e-22 107.8 148 44.6
VMungo1215G0697 Vigna mungo HOM05D001719 ORTHO05D008373 9.6e-22 107.8 148 44.6
Aqoxy5G00876 Aquilegia oxysepala HOM05D001719 ORTHO05D008373 1.3e-21 107.5 148 42.6
arahy.Tifrunner.gnm1.ann1.EV0K0L Arachis hypogaea HOM05D001719 ORTHO05D008373 1.3e-21 107.5 148 45.3
arahy.Tifrunner.gnm1.ann1.W4JRHW Arachis hypogaea HOM05D001719 ORTHO05D008373 1.3e-21 107.5 148 45.3
Sed0011640 Sechium edule HOM05D001719 ORTHO05D008373 1.6e-21 107.1 148 43.2
CANSAT25G2505 Cannabis sativa HOM05D001719 ORTHO05D008373 2.1e-21 106.7 148 42.6
Glyma.11G001700 Glycine max HOM05D001719 ORTHO05D008373 2.1e-21 106.7 148 43.2
Sc12g0006760 Simmondsia chinensis HOM05D001719 ORTHO05D008373 2.1e-21 106.7 148 43.2
EL10Ac8g19389 Beta vulgaris HOM05D001719 ORTHO05D008373 2.8e-21 106.3 148 42.6
AUR62032992 Chenopodium quinoa HOM05D001719 ORTHO05D008373 2.8e-21 106.3 147 45.6
HPP92_009540 Vanilla planifolia HOM05D001719 ORTHO05D008373 3.7e-21 105.9 148 42.6
Zm00001eb007700 Zea mays HOM05D001719 ORTHO05D008373 3.7e-21 105.9 148 42.6
Thhalv10020962m.g Eutrema salsugineum HOM05D001719 ORTHO05D008373 4.8e-21 105.5 148 41.9
Psat4g227560 Pisum sativum HOM05D001719 ORTHO05D008373 4.8e-21 105.5 148 42.6
CARHR095090 Cardamine hirsuta HOM05D001719 ORTHO05D008373 6.2e-21 105.1 148 41.2
Os03g0202300 Oryza sativa ssp. japonica HOM05D001719 ORTHO05D008373 6.2e-21 105.1 148 42.6
BcaB04g19055 Brassica carinata HOM05D001719 ORTHO05D008373 8.1e-21 104.8 148 40.5
AUR62034082 Chenopodium quinoa HOM05D001719 ORTHO05D008373 1.1e-20 104.4 147 44.9
Ca_24358_v3 Cicer arietinum L. HOM05D001719 ORTHO05D008373 1.1e-20 104.4 148 42.6
Ah.14g085660 Amaranthus hybridus HOM05D001719 ORTHO05D008373 1.4e-20 104.0 147 42.9
Aa31LG8G6410 Aethionema arabicum HOM05D001719 ORTHO05D008373 1.8e-20 103.6 148 41.2
BcaC01g03613 Brassica carinata HOM05D001719 ORTHO05D008373 1.8e-20 103.6 148 39.9
A03p41340 Brassica napus HOM05D001719 ORTHO05D008373 1.8e-20 103.6 148 39.9
C03p50500 Brassica napus HOM05D001719 ORTHO05D008373 1.8e-20 103.6 148 39.9
BolC3t17340H Brassica oleracea HOM05D001719 ORTHO05D008373 1.8e-20 103.6 148 39.9
BraA03t13288Z Brassica rapa HOM05D001719 ORTHO05D008373 1.8e-20 103.6 148 39.9
Lalb_Chr09g0319611 Lupinus albus HOM05D001719 ORTHO05D008373 2.4e-20 103.2 148 43.2
Sp3g17670 Schrenkiella parvula HOM05D001719 ORTHO05D008373 2.4e-20 103.2 148 39.9
TWI14G0581 Tripterygium wilfordii HOM05D001719 ORTHO05D008373 2.4e-20 103.2 148 43.9
Lj1g0020489 Lotus japonicus HOM05D001719 ORTHO05D008373 1.2e-19 100.9 148 41.2
Medtr5g005050 Medicago truncatula HOM05D001719 ORTHO05D008373 1.5e-19 100.5 148 41.2
PSO017G6860 Papaver somniferum HOM05D001719 ORTHO05D008373 7.6e-19 98.2 148 43.2
Lsat_1_v5_gn_0_39381 Lactuca sativa HOM05D001719 ORTHO05D008373 2.5e-17 93.2 154 42.2
QL11p030649 Quercus lobata HOM05D001719 ORTHO05D008373 5.5e-17 92.0 181 37.0
SEGI_25830 Sequoiadendron giganteum HOM05D001719 ORTHO05D008373 5.5e-17 92.0 149 38.3
FAN24G2863 Fragaria x ananassa HOM05D001719 ORTHO05D008373 2.3e-15 86.7 117 44.4
Mapoly0003s0260 Marchantia polymorpha HOM05D001719 ORTHO05D008373 2.1e-13 80.1 148 35.1
Pp3c13_1500 Physcomitrium patens HOM05D001719 ORTHO05D008373 1.8e-12 77.0 148 32.4
Cre01.g028450 Chlamydomonas reinhardtii HOM05D001719 ORTHO05D008373 4.1e-12 75.9 149 33.6
SMO266G0039 Selaginella moellendorffii HOM05D001719 ORTHO05D008373 9.0e-12 74.7 106 41.5
MD05G1099700 Malus domestica HOM05D001719 ORTHO05D008373 2.2e-10 70.1 117 40.2
CBR_g8391 Chara braunii HOM05D001719 ORTHO05D008373 2.9e-10 69.7 149 32.2
Glyma.01G242600 Glycine max HOM05D001719 ORTHO05D008373 2.9e-10 69.7 148 34.5
AagrBONN_evm.TU.Sc2ySwM_340.471 Anthoceros agrestis HOM05D001719 ORTHO05D008373 5.0e-10 68.9 61 54.1
MCO15G562 Micromonas commoda HOM05D001719 ORTHO05D008373 1.9e-09 67.0 62 53.2
TPR.G8332 Trifolium pratense HOM05D001719 ORTHO05D008373 3.5e-08 62.8 113 38.1
PRCOL_00004724 Prasinoderma coloniale HOM05D001719 ORTHO05D008373 7.9e-08 61.6 152 30.9
MCO09G613 Micromonas commoda HOM05D001719 ORTHO05D008373 6.7e-07 58.5 62 48.4


User provided reference genes

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