Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold352G49687 Striga asiatica HOM05D002705 ORTHO05D004955 0.0e+00 2285.0 1164 100.0
Migut.F01210 Erythranthe guttata HOM05D002705 ORTHO05D004955 0.0e+00 1620.1 1190 73.5
SalBow2G1886 Salvia bowleyana HOM05D002705 ORTHO05D004955 0.0e+00 1484.5 1273 65.4
Cc00_g24340 Coffea canephora HOM05D002705 ORTHO05D004955 0.0e+00 1390.2 1243 62.3
Actinidia13623 Actinidia chinensis HOM05D002705 ORTHO05D004955 0.0e+00 1378.6 1216 62.7
Sopen03g024730 Solanum pennellii HOM05D002705 ORTHO05D004955 0.0e+00 1373.6 1234 63.0
Dinv34540 Davidia involucrata HOM05D002705 ORTHO05D004955 0.0e+00 1359.0 1214 63.3
Cfa013602 Carpinus fangiana HOM05D002705 ORTHO05D004955 0.0e+00 1356.7 1181 62.9
TAR636G2282 Trochodendron aralioides HOM05D002705 ORTHO05D004955 0.0e+00 1321.2 1205 60.9
QL09p027408 Quercus lobata HOM05D002705 ORTHO05D004955 0.0e+00 1315.4 1249 59.8
CiPaw.07G183200 Carya illinoinensis HOM05D002705 ORTHO05D004955 0.0e+00 1303.5 1081 64.6
Nitab4.5_0010058g0010 Nicotiana tabacum HOM05D002705 ORTHO05D004955 0.0e+00 1302.0 1229 60.7
Potri.012G114100 Populus trichocarpa HOM05D002705 ORTHO05D004955 0.0e+00 1302.0 1163 62.1
MSTRG.8400 Avicennia marina HOM05D002705 ORTHO05D004955 0.0e+00 1300.0 810 81.9
Prupe.2G270600 Prunus persica HOM05D002705 ORTHO05D004955 0.0e+00 1290.8 1188 60.4
DCAR_014643 Daucus carota HOM05D002705 ORTHO05D004955 0.0e+00 1290.0 1013 67.3
RcHm_v2.0_Chr1g0373301 Rosa chinensis HOM05D002705 ORTHO05D004955 0.0e+00 1288.1 1160 61.6
Sabra12G0083000 Salix brachista HOM05D002705 ORTHO05D004955 0.0e+00 1287.3 1192 60.9
TWI39G0103 Tripterygium wilfordii HOM05D002705 ORTHO05D004955 0.0e+00 1286.6 1206 59.1
Gorai.006G273800 Gossypium raimondii HOM05D002705 ORTHO05D004955 0.0e+00 1284.2 1187 60.2
Ciclev10033740m.g Citrus clementina HOM05D002705 ORTHO05D004955 0.0e+00 1283.5 1178 59.9
Nn1g00769 Nelumbo nucifera HOM05D002705 ORTHO05D004955 0.0e+00 1280.4 1190 59.1
Thecc.03G145700 Theobroma cacao HOM05D002705 ORTHO05D004955 0.0e+00 1280.0 1147 61.0
Atru.chr6.1980 Acer truncatum HOM05D002705 ORTHO05D004955 0.0e+00 1274.6 1187 59.6
Atru.chr6.2006 Acer truncatum HOM05D002705 ORTHO05D004955 0.0e+00 1273.5 1187 59.6
Gohir.D09G249500 Gossypium hirsutum HOM05D002705 ORTHO05D004955 0.0e+00 1270.4 1187 59.8
Rhsim03G0158700 Rhododendron simsii HOM05D002705 ORTHO05D004955 0.0e+00 1268.8 1232 59.1
HanXRQChr15g0493601 Helianthus annuus HOM05D002705 ORTHO05D004955 0.0e+00 1264.6 1255 58.7
GSVIVG01013853001 Vitis vinifera HOM05D002705 ORTHO05D004955 0.0e+00 1263.8 961 68.5
Haze_22224 Corylus avellana HOM05D002705 ORTHO05D004955 0.0e+00 1255.0 1228 57.6
FvH4_7g26710 Fragaria vesca HOM05D002705 ORTHO05D004955 0.0e+00 1254.2 1159 60.3
FAN03G2179 Fragaria x ananassa HOM05D002705 ORTHO05D004955 0.0e+00 1252.3 1169 60.5
ECA232G4016 Erigeron canadensis HOM05D002705 ORTHO05D004955 0.0e+00 1251.5 1255 56.8
Lj8C49G2 Lonicera japonica HOM05D002705 ORTHO05D004955 0.0e+00 1249.6 1361 54.8
Aqoxy7G00864 Aquilegia oxysepala HOM05D002705 ORTHO05D004955 0.0e+00 1244.6 1260 56.6
Gohir.A09G248500 Gossypium hirsutum HOM05D002705 ORTHO05D004955 0.0e+00 1240.3 1184 58.6
Lj5g0005183 Lotus japonicus HOM05D002705 ORTHO05D004955 0.0e+00 1239.6 1166 59.2
FAN06G0843 Fragaria x ananassa HOM05D002705 ORTHO05D004955 0.0e+00 1237.6 1164 60.1
Glyma.20G198400 Glycine max HOM05D002705 ORTHO05D004955 0.0e+00 1237.6 1170 58.0
Lalb_Chr06g0169611 Lupinus albus HOM05D002705 ORTHO05D004955 0.0e+00 1228.4 1183 57.7
Sed0003657 Sechium edule HOM05D002705 ORTHO05D004955 0.0e+00 1223.8 1167 57.4
THA.LOC104825051 Tarenaya hassleriana HOM05D002705 ORTHO05D004955 0.0e+00 1223.0 1178 57.6
PGR142G4199 Punica granatum HOM05D002705 ORTHO05D004955 0.0e+00 1217.6 1173 57.9
Aa31LG7G10510 Aethionema arabicum HOM05D002705 ORTHO05D004955 0.0e+00 1215.3 1179 57.4
ClCG01G004930 Citrullus lanatus HOM05D002705 ORTHO05D004955 0.0e+00 1214.5 1198 55.9
Oeu044165.1 Olea europaea HOM05D002705 ORTHO05D004955 0.0e+00 1214.5 982 67.1
TPR.G18561 Trifolium pratense HOM05D002705 ORTHO05D004955 0.0e+00 1214.5 1078 61.2
CsaV3_5G005160 Cucumis sativus L. HOM05D002705 ORTHO05D004955 0.0e+00 1214.1 1179 57.3
Medtr1g072800 Medicago truncatula HOM05D002705 ORTHO05D004955 0.0e+00 1212.6 1016 63.2
AL7G28030 Arabidopsis lyrata HOM05D002705 ORTHO05D004955 0.0e+00 1209.9 1166 58.4
MELO3C005443.2 Cucumis melo HOM05D002705 ORTHO05D004955 0.0e+00 1209.1 1167 57.0
Psat6g140240 Pisum sativum HOM05D002705 ORTHO05D004955 0.0e+00 1207.6 1027 62.7
Eucgr.K00116 Eucalyptus grandis HOM05D002705 ORTHO05D004955 0.0e+00 1205.7 920 67.6
AT4G25120 Arabidopsis thaliana HOM05D002705 ORTHO05D004955 0.0e+00 1203.7 1157 58.2
vmacro06848 Vaccinium macrocarpon HOM05D002705 ORTHO05D004955 0.0e+00 1202.6 1133 59.6
COL.COLO4_37311 Corchorus olitorius HOM05D002705 ORTHO05D004955 0.0e+00 1202.2 1109 61.0
Carub.0007s1591 Capsella rubella HOM05D002705 ORTHO05D004955 0.0e+00 1201.0 1164 57.9
Thhalv10024258m.g Eutrema salsugineum HOM05D002705 ORTHO05D004955 0.0e+00 1198.3 1167 57.8
PSO675G1384 Papaver somniferum HOM05D002705 ORTHO05D004955 0.0e+00 1192.9 921 68.6
Lsat_1_v5_gn_0_9880 Lactuca sativa HOM05D002705 ORTHO05D004955 0.0e+00 1190.6 1245 56.4
BcaC06g32837 Brassica carinata HOM05D002705 ORTHO05D004955 0.0e+00 1188.7 1213 56.1
Manes.14G040900 Manihot esculenta HOM05D002705 ORTHO05D004955 0.0e+00 1185.2 880 70.5
Sp7g23120 Schrenkiella parvula HOM05D002705 ORTHO05D004955 0.0e+00 1175.2 931 65.7
MD07G1244800 Malus domestica HOM05D002705 ORTHO05D004955 0.0e+00 1164.8 1174 57.1
FAN10G0038 Fragaria x ananassa HOM05D002705 ORTHO05D004955 0.0e+00 1156.0 1233 55.3
Solyc03g093850.2 Solanum lycopersicum HOM05D002705 ORTHO05D004955 0.0e+00 1149.4 1044 62.2
FAN01G0508 Fragaria x ananassa HOM05D002705 ORTHO05D004955 0.0e+00 1148.7 1168 56.8
EL10As1g23078 Beta vulgaris HOM05D002705 ORTHO05D004955 0.0e+00 1144.4 1206 54.1
Os07g0492100 Oryza sativa ssp. japonica HOM05D002705 ORTHO05D004955 0.0e+00 1142.5 921 64.1
Phvul.L001885 Phaseolus vulgaris HOM05D002705 ORTHO05D004955 0.0e+00 1139.8 1124 56.8
C07p54050 Brassica napus HOM05D002705 ORTHO05D004955 0.0e+00 1131.3 1203 54.3
ATR0665G329 Amborella trichopoda HOM05D002705 ORTHO05D004955 0.0e+00 1129.4 1224 54.2
BolC7t45891H Brassica oleracea HOM05D002705 ORTHO05D004955 0.0e+00 1129.4 1207 54.3
A03p55770 Brassica napus HOM05D002705 ORTHO05D004955 0.0e+00 1127.1 1210 54.0
Nitab4.5_0000103g0340 Nicotiana tabacum HOM05D002705 ORTHO05D004955 0.0e+00 1119.0 858 70.0
BraA03t14645Z Brassica rapa HOM05D002705 ORTHO05D004955 0.0e+00 1115.5 1225 53.4
unitig_578.g16613 Utricularia gibba HOM05D002705 ORTHO05D004955 0.0e+00 1114.8 1172 55.7
MD07G1243100 Malus domestica HOM05D002705 ORTHO05D004955 0.0e+00 1114.0 885 66.6
Hma1.2p1_2119F.1_g314370 Hydrangea macrophylla HOM05D002705 ORTHO05D004955 0.0e+00 1101.7 820 70.6
Ah.02g115400 Amaranthus hybridus HOM05D002705 ORTHO05D004955 0.0e+00 1090.9 1120 55.0
Cpa.g.sc13.232 Carica papaya HOM05D002705 ORTHO05D004955 4.0e-298 1028.5 962 60.4
MD07G1245700 Malus domestica HOM05D002705 ORTHO05D004955 3.2e-295 1018.8 847 64.6
MD07G1243600 Malus domestica HOM05D002705 ORTHO05D004955 1.9e-287 993.0 1174 51.1
HPP92_003517 Vanilla planifolia HOM05D002705 ORTHO05D004955 7.4e-284 981.1 1055 52.5
CANSAT56G1220 Cannabis sativa HOM05D002705 ORTHO05D004955 5.3e-282 974.9 889 62.1
Mapoly0067s0049 Marchantia polymorpha HOM05D002705 ORTHO05D004955 2.2e-275 953.0 937 54.7
Pp3c1_29170 Physcomitrium patens HOM05D002705 ORTHO05D004955 6.5e-272 941.4 1313 44.0
AagrBONN_evm.TU.Sc2ySwM_117.709 Anthoceros agrestis HOM05D002705 ORTHO05D004955 1.3e-264 917.1 1051 50.0
MD07G1244300 Malus domestica HOM05D002705 ORTHO05D004955 4.7e-262 908.7 801 63.0
Peaxi162Scf00073g01729 Petunia axillaris HOM05D002705 ORTHO05D004955 6.5e-256 888.3 602 75.7
AUR62042388 Chenopodium quinoa HOM05D002705 ORTHO05D004955 1.3e-251 874.0 1128 48.1
arahy.Tifrunner.gnm1.ann1.WYM0Y2 Arachis hypogaea HOM05D002705 ORTHO05D004955 5.4e-250 868.6 699 64.1
arahy.Tifrunner.gnm1.ann1.ZG0SUW Arachis hypogaea HOM05D002705 ORTHO05D004955 2.7e-249 866.3 697 64.0
SMO263G0015 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 2.8e-238 829.7 932 49.8
SMO118G0423 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 2.8e-230 803.1 946 48.6
MD07G1241600 Malus domestica HOM05D002705 ORTHO05D004955 6.4e-227 792.0 640 65.8
Hma1.2p1_2119F.1_g314360 Hydrangea macrophylla HOM05D002705 ORTHO05D004955 8.9e-221 771.5 1073 47.3
CARHR232510 Cardamine hirsuta HOM05D002705 ORTHO05D004955 1.3e-219 767.7 622 65.6
Ca_09785_v3 Cicer arietinum L. HOM05D002705 ORTHO05D004955 1.9e-210 737.3 745 56.6
CSS0042603 Camellia sinensis var. sinensis HOM05D002705 ORTHO05D004955 3.1e-197 693.3 719 55.4
Sc11g0004220 Simmondsia chinensis HOM05D002705 ORTHO05D004955 2.6e-188 663.7 481 68.6
Nn1g00770 Nelumbo nucifera HOM05D002705 ORTHO05D004955 1.8e-176 624.4 508 65.0
CAN.G408.1 Capsicum annuum HOM05D002705 ORTHO05D004955 3.9e-176 623.2 415 75.7
AagrBONN_evm.TU.Sc2ySwM_340.578 Anthoceros agrestis HOM05D002705 ORTHO05D004955 1.7e-158 564.7 761 43.6
CAN.G1654.1 Capsicum annuum HOM05D002705 ORTHO05D004955 2.6e-143 514.2 391 69.3
HPP92_027816 Vanilla planifolia HOM05D002705 ORTHO05D004955 7.5e-143 512.7 747 42.4
CAN.G1406.2 Capsicum annuum HOM05D002705 ORTHO05D004955 2.7e-132 477.6 349 71.6
Manes.14G040200 Manihot esculenta HOM05D002705 ORTHO05D004955 6.6e-123 446.4 406 62.3
MD07G1241700 Malus domestica HOM05D002705 ORTHO05D004955 3.5e-116 424.1 406 58.9
FAN05G3181 Fragaria x ananassa HOM05D002705 ORTHO05D004955 6.4e-110 403.3 359 62.1
CBR_g55304 Chara braunii HOM05D002705 ORTHO05D004955 1.5e-90 339.0 409 45.2
FAN01G1045 Fragaria x ananassa HOM05D002705 ORTHO05D004955 4.3e-74 284.3 284 57.4
SMO118G0116 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 2.5e-69 268.5 520 36.2
CAN.G1406.1 Capsicum annuum HOM05D002705 ORTHO05D004955 5.5e-69 267.3 250 55.2
Pp3s32_280 Physcomitrium patens HOM05D020685 ORTHO05D022318 7.9e-68 263.5 709 31.5
CAN.G1654.2 Capsicum annuum HOM05D002705 ORTHO05D004955 3.3e-66 258.1 164 74.4
FAN17G2187 Fragaria x ananassa HOM05D002705 ORTHO05D004955 2.8e-65 255.0 276 55.8
CAN.G1559.4 Capsicum annuum HOM05D002705 ORTHO05D004955 3.7e-65 254.6 345 46.7
Hma1.2p1_2119F.1_g314380 Hydrangea macrophylla HOM05D002705 ORTHO05D004955 2.5e-58 231.9 234 55.6
Solyc03g093840.3 Solanum lycopersicum HOM05D002705 ORTHO05D004955 5.7e-58 230.7 189 66.1
Cpa.g.sc13.234 Carica papaya HOM05D002705 ORTHO05D004955 1.2e-55 223.0 162 71.0
Peaxi162Scf00073g01730 Petunia axillaris HOM05D002705 ORTHO05D004955 1.5e-55 222.6 448 39.5
MD07G1245200 Malus domestica HOM05D002705 ORTHO05D004955 1.4e-53 216.1 164 68.3
MCO05G634 Micromonas commoda HOM05D002705 ORTHO05D004955 1.5e-50 206.1 741 27.5
AagrBONN_evm.TU.Sc2ySwM_362.2714 Anthoceros agrestis HOM05D002705 ORTHO05D004955 1.8e-48 199.1 876 25.7
Ca_09786_v3 Cicer arietinum L. HOM05D002705 ORTHO05D004955 4.1e-48 198.0 168 61.9
Mapoly0020s0153 Marchantia polymorpha HOM05D002705 ORTHO05D004955 3.4e-47 194.9 717 25.5
AagrBONN_evm.TU.Sc2ySwM_368.2221 Anthoceros agrestis HOM05D002705 ORTHO05D004955 4.5e-47 194.5 736 27.3
SEGI_07874 Sequoiadendron giganteum HOM05D002705 ORTHO05D004955 5.0e-46 191.0 264 43.9
Cfa026800 Carpinus fangiana HOM05D002705 ORTHO05D004955 5.2e-43 181.0 804 25.4
Pp3s70_120 Physcomitrium patens HOM05D002705 ORTHO05D004955 4.4e-42 177.9 670 26.4
SMO118G0216 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 1.3e-41 176.4 267 42.3
Peaxi162Scf00073g01719 Petunia axillaris HOM05D002705 ORTHO05D004955 4.8e-41 174.5 191 55.5
CBR_g46888 Chara braunii HOM05D002705 ORTHO05D004955 7.0e-40 170.6 140 62.1
SEGI_26843 Sequoiadendron giganteum HOM05D002705 ORTHO05D004955 1.6e-39 169.5 120 70.0
SEGI_05624 Sequoiadendron giganteum HOM05D002705 ORTHO05D004955 1.7e-38 166.0 194 49.5
SHI35079 Sapria himalayana HOM05D002705 ORTHO05D000001 1.4e-35 156.4 243 42.8
Sc11g0004230 Simmondsia chinensis HOM05D002705 ORTHO05D004955 2.3e-35 155.6 137 60.6
CDE06G1177 Ceratophyllum demersum HOM05D002705 ORTHO05D004955 8.8e-35 153.7 197 44.2
SEGI_13522 Sequoiadendron giganteum HOM05D002705 ORTHO05D004955 1.2e-34 153.3 842 22.8
SMO222G0004 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 1.7e-33 149.4 158 52.5
SEGI_07071 Sequoiadendron giganteum HOM05D002705 ORTHO05D004955 1.2e-31 143.3 492 31.7
PRCOL_00004767 Prasinoderma coloniale HOM05D002705 ORTHO05D004955 2.2e-30 139.0 800 24.2
VMungo0720G0654 Vigna mungo HOM05D002705 ORTHO05D004955 1.2e-26 126.7 115 60.9
ATR0789G167 Amborella trichopoda HOM05D002705 ORTHO05D004955 4.4e-26 124.8 479 25.5
SMO119G0107 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 3.7e-25 121.7 762 23.0
CBR_g22322 Chara braunii HOM05D000019 ORTHO05D000002 4.1e-24 118.2 294 29.9
Hund10671 Selenicereus undatus HOM05D002705 ORTHO05D004955 2.7e-23 115.5 82 67.1
MD07G1244100 Malus domestica HOM05D002705 ORTHO05D004955 6.5e-22 110.9 73 72.6
CDE06G2589 Ceratophyllum demersum HOM05D002705 ORTHO05D004955 3.2e-21 108.6 288 33.0
Lsat_1_v5_gn_5_183700 Lactuca sativa HOM05D002705 ORTHO05D021366 2.1e-20 105.9 69 78.3
Medtr0675s0010 Medicago truncatula HOM05D002705 ORTHO05D004955 2.8e-20 105.5 672 25.9
CBR_g55305 Chara braunii HOM05D002705 ORTHO05D004955 6.1e-20 104.4 105 50.5
MD07G1244200 Malus domestica HOM05D002705 ORTHO05D004955 8.0e-20 104.0 123 44.7
Cre07.g343333 Chlamydomonas reinhardtii HOM05D002705 ORTHO05D004955 2.3e-19 102.4 265 29.4
Cre07.g314400 Chlamydomonas reinhardtii HOM05D002705 ORTHO05D004955 5.0e-14 84.7 553 23.1
SMO119G0278 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 1.8e-11 76.3 150 33.3
Cre07.g312250 Chlamydomonas reinhardtii HOM05D002705 ORTHO05D004955 6.8e-11 74.3 99 43.4
CBR_g26524 Chara braunii HOM05D002705 ORTHO05D004955 4.1e-08 65.1 95 41.1
Pp3s70_20 Physcomitrium patens HOM05D002705 ORTHO05D313936 2.7e-07 62.4 691 20.7
MD07G1245800 Malus domestica HOM05D002705 ORTHO05D004955 7.8e-07 60.8 196 32.1
FAN03G1556 Fragaria x ananassa HOM05D002001 ORTHO05D004100 1.0e-06 60.5 73 52.1


User provided reference genes

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