Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold34G13883 Striga asiatica HOM05D002508 ORTHO05D401873 8.1e-117 423.7 207 100.0
SGA_v2.0_scaffold13G06659 Striga asiatica HOM05D002728 ORTHO05D002874 6.0e-19 98.6 68 70.6
MSTRG.19298 Avicennia marina HOM05D002728 ORTHO05D002874 1.8e-15 87.0 65 60.0
Migut.J00687 Erythranthe guttata HOM05D002728 ORTHO05D002874 7.6e-14 81.6 66 54.5
Oeu028651.1 Olea europaea HOM05D002728 ORTHO05D002874 7.6e-14 81.6 59 61.0
SGA_v2.0_scaffold130G34199 Striga asiatica HOM05D002508 ORTHO05D008845 2.2e-13 80.1 56 71.4
Dinv41242 Davidia involucrata HOM05D002728 ORTHO05D002874 9.2e-12 74.7 61 55.7
Oeu024443.1 Olea europaea HOM05D002508 ORTHO05D008845 3.5e-11 72.8 65 60.0
Cc06_g06720 Coffea canephora HOM05D002728 ORTHO05D002874 1.0e-10 71.2 107 37.4
Migut.H02144 Erythranthe guttata HOM05D002508 ORTHO05D008845 1.0e-10 71.2 56 66.1
Hma1.2p1_0155F.1_g068590 Hydrangea macrophylla HOM05D002728 ORTHO05D002874 1.3e-10 70.9 61 54.1
unitig_27.g25146 Utricularia gibba HOM05D002508 ORTHO05D008845 1.7e-10 70.5 56 64.3
Cc02_g31460 Coffea canephora HOM05D002728 ORTHO05D002874 1.1e-09 67.8 67 46.3
Dinv12385 Davidia involucrata HOM05D002508 ORTHO05D008845 1.1e-09 67.8 65 55.4
Dinv07682 Davidia involucrata HOM05D002508 ORTHO05D008845 1.9e-09 67.0 65 55.4
Dinv42718 Davidia involucrata HOM05D002728 ORTHO05D002874 2.5e-09 66.6 61 50.8
Dinv43383 Davidia involucrata HOM05D002728 ORTHO05D002874 2.5e-09 66.6 61 50.8
Peaxi162Scf00083g01924 Petunia axillaris HOM05D002728 ORTHO05D002874 3.3e-09 66.2 59 49.2
PGSC0003DMG400028143 Solanum tuberosum HOM05D002728 ORTHO05D002874 5.6e-09 65.5 59 49.2
Nitab4.5_0005257g0030 Nicotiana tabacum HOM05D002728 ORTHO05D002874 9.6e-09 64.7 144 33.3
Hma1.2p1_0178F.1_g078670 Hydrangea macrophylla HOM05D002508 ORTHO05D008845 1.6e-08 63.9 99 38.4
Solyc10g081830.3 Solanum lycopersicum HOM05D002728 ORTHO05D002874 2.1e-08 63.5 59 47.5
Actinidia38632 Actinidia chinensis HOM05D002728 ORTHO05D002874 3.6e-08 62.8 73 45.2
CSS0050130 Camellia sinensis var. sinensis HOM05D002728 ORTHO05D002874 3.6e-08 62.8 58 55.2
HanXRQChr09g0260281 Helianthus annuus HOM05D002508 ORTHO05D008845 6.2e-08 62.0 65 49.2
Lsat_1_v5_gn_5_5261 Lactuca sativa HOM05D002508 ORTHO05D008845 6.2e-08 62.0 65 49.2
Nitab4.5_0002027g0210 Nicotiana tabacum HOM05D002508 ORTHO05D008845 6.2e-08 62.0 56 53.6
Nitab4.5_0006142g0030 Nicotiana tabacum HOM05D002508 ORTHO05D008845 6.2e-08 62.0 56 53.6
Peaxi162Scf00229g01118 Petunia axillaris HOM05D002508 ORTHO05D008845 6.2e-08 62.0 56 53.6
Solyc12g013990.3 Solanum lycopersicum HOM05D002508 ORTHO05D008845 6.2e-08 62.0 56 53.6
Sopen12g005740 Solanum pennellii HOM05D002508 ORTHO05D008845 6.2e-08 62.0 56 53.6
CAN.G1716.5 Capsicum annuum HOM05D001556 ORTHO05D001505 8.1e-08 61.6 56 55.4
ECA232G1095 Erigeron canadensis HOM05D002508 ORTHO05D008845 8.1e-08 61.6 65 49.2
HPP92_020066 Vanilla planifolia HOM05D002508 ORTHO05D008845 8.1e-08 61.6 56 57.1
Actinidia17316 Actinidia chinensis HOM05D002728 ORTHO05D002874 1.4e-07 60.8 61 50.8
Nitab4.5_0002165g0040 Nicotiana tabacum HOM05D002728 ORTHO05D002874 1.8e-07 60.5 144 31.9
CAN.G674.8 Capsicum annuum HOM05D002728 ORTHO05D002874 2.4e-07 60.1 59 45.8
MBI06_g13023_MAGBIO Magnolia biondii HOM05D002508 ORTHO05D008845 2.4e-07 60.1 97 41.2
Nn6g33711 Nelumbo nucifera HOM05D002508 ORTHO05D008845 2.4e-07 60.1 98 38.8
SEGI_05268 Sequoiadendron giganteum HOM05D002508 ORTHO05D008845 2.4e-07 60.1 56 51.8
Sopen10g032350 Solanum pennellii HOM05D002728 ORTHO05D002874 3.1e-07 59.7 59 49.2
Cc11_g04580 Coffea canephora HOM05D002728 ORTHO05D002874 4.0e-07 59.3 67 43.3
CiPaw.07G192700 Carya illinoinensis HOM05D002728 ORTHO05D002874 5.3e-07 58.9 61 47.5
PSO063G6143 Papaver somniferum HOM05D002508 ORTHO05D008845 5.3e-07 58.9 85 43.5
Actinidia03640 Actinidia chinensis HOM05D002508 ORTHO05D008845 6.9e-07 58.5 98 33.7
SalBow7G1898 Salvia bowleyana HOM05D002508 ORTHO05D008845 6.9e-07 58.5 56 57.1
TAR627G0654 Trochodendron aralioides HOM05D002508 ORTHO05D008845 6.9e-07 58.5 98 37.8
Cc05_g08460 Coffea canephora HOM05D002508 ORTHO05D008845 9.0e-07 58.2 99 37.4
Duzib264G0378 Durio zibethinus HOM05D002508 ORTHO05D008845 9.0e-07 58.2 43 69.8
ECA236G0567 Erigeron canadensis HOM05D002728 ORTHO05D002874 9.0e-07 58.2 77 40.3
Thecc.09G176600 Theobroma cacao HOM05D002728 ORTHO05D002874 1.2e-06 57.8 68 45.6
PSO782G1110 Papaver somniferum HOM05D002508 ORTHO05D008845 1.5e-06 57.4 85 42.4
Potri.014G143000 Populus trichocarpa HOM05D002508 ORTHO05D008845 1.5e-06 57.4 56 53.6
Aqoxy2G02157 Aquilegia oxysepala HOM05D002508 ORTHO05D008845 2.0e-06 57.0 56 50.0
CSS0050305 Camellia sinensis var. sinensis HOM05D002508 ORTHO05D008845 2.0e-06 57.0 65 44.6
Rhsim04G0075000 Rhododendron simsii HOM05D002508 ORTHO05D008845 2.0e-06 57.0 62 51.6
CiPaw.03G194200 Carya illinoinensis HOM05D002508 ORTHO05D008845 2.6e-06 56.6 65 47.7
Zm00001eb383810 Zea mays HOM05D002508 ORTHO05D008845 3.4e-06 56.2 45 62.2
ATR0012G045 Amborella trichopoda HOM05D002508 ORTHO05D008845 4.4e-06 55.8 45 60.0
Lalb_Chr03g0030001 Lupinus albus HOM05D002508 ORTHO05D008845 4.4e-06 55.8 62 48.4
QL08p042161 Quercus lobata HOM05D002508 ORTHO05D008845 4.4e-06 55.8 78 43.6
Sc06g0002080 Simmondsia chinensis HOM05D002508 ORTHO05D008845 4.4e-06 55.8 43 65.1
Ca_21231_v3 Cicer arietinum L. HOM05D002728 ORTHO05D002874 5.8e-06 55.5 61 41.0
Hund25053 Selenicereus undatus HOM05D002508 ORTHO05D008845 5.8e-06 55.5 43 62.8
COL.COLO4_33600 Corchorus olitorius HOM05D002508 ORTHO05D008845 7.6e-06 55.1 43 62.8
FAN09G4070 Fragaria x ananassa HOM05D002508 ORTHO05D008845 7.6e-06 55.1 82 45.1
GSVIVG01020727001 Vitis vinifera HOM05D002508 ORTHO05D008845 7.6e-06 55.1 82 42.7
Hma1.2p1_1025F.1_g249360 Hydrangea macrophylla HOM05D002728 ORTHO05D002874 9.9e-06 54.7 61 47.5
Lj3g0003002 Lotus japonicus HOM05D002508 ORTHO05D008845 9.9e-06 54.7 56 50.0
Oeu053248.1 Olea europaea HOM05D000134 ORTHO05D003318 9.9e-06 54.7 60 51.7


User provided reference genes

Program Settings