Gene: Nitab4.5_0002027g0210
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0002027g0210
- Transcript Identifier Nitab4.5_0002027g0210.1
- Gene Type Coding gene
- Location Nitab4.5_0002027 : 390117-412288 : negative
Gene Family Information
- ID HOM05D002508
- #Genes/#Species 272/99
- Phylogenetic origin
- ID ORTHO05D008845
- #Genes/#Species 113/88
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Nitab4.5_0002027g0210.1
- SR1-identifier Nta00g06910.1
Descriptions
- Description Exonuclease, phage-type/RecB, C-terminal, Ribosomal protein L1/ribosomal biogenesis protein, Ribosomal protein L1-like, YqaJ viral recombinase, Ribosomal protein L1, 2-layer alpha/beta-sandwich, Ribosomal protein L1, 3-layer alpha/beta-sandwich, Restriction endonuclease type II-like
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | ISO | PLAZA Homology (enrichment) | translation | HOM05D002508 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | ISO | PLAZA Homology (enrichment) | RNA binding | HOM05D002508 |
| GO:0003735 | ISO | PLAZA Homology (enrichment) | structural constituent of ribosome | HOM05D002508 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G42710 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015934 | ISO | PLAZA Homology (enrichment) | large ribosomal subunit | HOM05D002508 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011604 | Exonuclease, phage-type/RecB, C-terminal |
| IPR028364 | Ribosomal protein L1/ribosomal biogenesis protein |
| IPR023674 | Ribosomal protein L1-like |
| IPR011335 | Restriction endonuclease type II-like |
| IPR019080 | YqaJ viral recombinase |
| IPR016095 | Ribosomal protein L1, 3-layer alpha/beta-sandwich |
| Mapman id | Description |
|---|---|
| 17.7.1.1.1 | Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL1 |