Gene: Solyc12g013990.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g013990.3
  • Transcript Identifier Solyc12g013990.3.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 4866972-4876773 : positive

Gene Family Information

  • ID HOM05D002508
  • #Genes/#Species 272/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g013990.3.1
  • uniprot A0A3Q7J4F8
  • gene_id Solyc12g013990

Descriptions

  • Description 50S ribosomal protein L1 (AHRD V3.3 *** A0A1J3CLY7_NOCCA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016310
IEA
GOA Databasephosphorylation
GO:0006468
IEA
GOA Databaseprotein phosphorylation
GO:0007165
IBA
GOA Databasesignal transduction
GO:0006412
ISO
PLAZA Homology (enrichment)translation HOM05D002508

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0004674
IEA
GOA Databaseprotein serine/threonine kinase activity
GO:0016301
IEA
GOA Databasekinase activity
GO:0004672
IBA
IEA
GOA Databaseprotein kinase activity
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D002508
GO:0003735
ISO
PLAZA Homology (enrichment)structural constituent of ribosome HOM05D002508
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G42710

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
GOA Databasecytoplasm
GO:0015934
ISO
PLAZA Homology (enrichment)large ribosomal subunit HOM05D002508

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023674 Ribosomal protein L1-like
IPR028364 Ribosomal protein L1/ribosomal biogenesis protein
IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich
Mapman id Description
17.7.1.1.1 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL1