Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold343G49442 Striga asiatica HOM05D000024 ORTHO05D000022 1.9e-136 489.2 246 100.0
SGA_v2.0_scaffold10G05079 Striga asiatica HOM05D000003 ORTHO05D000004 2.2e-12 77.0 145 35.2
BcaC09g51035 Brassica carinata HOM05D000003 ORTHO05D000004 5.1e-09 65.9 85 38.8
SGA_v2.0_scaffold118G32446 Striga asiatica HOM05D000003 ORTHO05D000004 1.1e-08 64.7 146 28.1
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 1.1e-08 64.7 261 23.4
SGA_v2.0_scaffold11G05791 Striga asiatica HOM05D000563 ORTHO05D000536 1.9e-08 63.9 257 24.5
SGA_v2.0_scaffold206G41847 Striga asiatica HOM05D000254 ORTHO05D010636 1.9e-08 63.9 121 31.4
SHI30260 Sapria himalayana HOM05D000024 ORTHO05D000022 4.3e-08 62.8 193 29.0
SHI30798 Sapria himalayana HOM05D000003 ORTHO05D000004 1.6e-07 60.8 176 27.8
SHI38559 Sapria himalayana HOM05D000024 ORTHO05D000022 1.6e-07 60.8 211 26.1
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 2.8e-07 60.1 109 31.2
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 2.8e-07 60.1 263 20.5
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 3.7e-07 59.7 43 62.8
PSO339G2792 Papaver somniferum HOM05D000003 ORTHO05D000004 4.8e-07 59.3 96 34.4
SHI33001 Sapria himalayana HOM05D000024 ORTHO05D000022 4.8e-07 59.3 187 26.7
BcaC05g28118 Brassica carinata HOM05D000003 ORTHO05D000004 6.2e-07 58.9 97 32.0
SHI15844 Sapria himalayana HOM05D000024 ORTHO05D000022 6.2e-07 58.9 204 25.5
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 6.2e-07 58.9 201 24.9
SHI04235 Sapria himalayana HOM05D000024 ORTHO05D000022 1.1e-06 58.2 174 27.0
SGA_v2.0_scaffold12G06017 Striga asiatica HOM05D009140 ORTHO05D010636 1.1e-06 58.2 161 26.7
SHI30835 Sapria himalayana HOM05D000024 ORTHO05D000022 1.4e-06 57.8 197 25.9
Atru.chr11.920 Acer truncatum HOM05D000003 ORTHO05D000004 2.4e-06 57.0 88 40.9
SGA_v2.0_scaffold71G23744 Striga asiatica HOM05D004014 ORTHO05D005890 2.4e-06 57.0 144 27.1
SHI49182 Sapria himalayana HOM05D000024 ORTHO05D000006 3.1e-06 56.6 190 26.8
SHI50028 Sapria himalayana HOM05D000024 ORTHO05D000022 4.0e-06 56.2 211 25.1
Atru.chr1.2596 Acer truncatum HOM05D000003 ORTHO05D000004 5.3e-06 55.8 88 38.6
SHI35754 Sapria himalayana HOM05D000024 ORTHO05D000022 5.3e-06 55.8 178 26.4
SHI37944 Sapria himalayana HOM05D000024 ORTHO05D000022 5.3e-06 55.8 176 27.3
SGA_v2.0_scaffold246G44809 Striga asiatica HOM05D000003 ORTHO05D000004 5.3e-06 55.8 43 58.1
SHI32275 Sapria himalayana HOM05D000024 ORTHO05D000004 6.9e-06 55.5 175 28.0
CANSAT80G1739 Cannabis sativa HOM05D000003 ORTHO05D009135 9.0e-06 55.1 194 24.2
SHI19898 Sapria himalayana HOM05D000024 ORTHO05D000022 9.0e-06 55.1 176 26.7
SGA_v2.0_scaffold81G26044 Striga asiatica HOM05D000123 ORTHO05D000004 9.0e-06 55.1 57 47.4


User provided reference genes

Program Settings