Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold323G48640 Striga asiatica HOM05D002535 ORTHO05D025122 4.6e-103 377.9 188 100.0
SGA_v2.0_scaffold332G48928 Striga asiatica HOM05D002535 ORTHO05D025122 1.2e-21 107.5 59 93.2
SGA_v2.0_scaffold100G29671 Striga asiatica HOM05D002535 ORTHO05D008858 3.1e-14 82.8 48 89.6
Migut.M01151 Erythranthe guttata HOM05D002535 ORTHO05D008858 3.4e-13 79.3 49 81.6
unitig_32.g10980 Utricularia gibba HOM05D002535 ORTHO05D008858 2.2e-12 76.6 48 79.2
Actinidia05620 Actinidia chinensis HOM05D002535 ORTHO05D008858 3.2e-11 72.8 49 73.5
Lj2C287G7 Lonicera japonica HOM05D002535 ORTHO05D008858 3.2e-11 72.8 53 67.9
Hma1.2p1_0881F.1_g232050 Hydrangea macrophylla HOM05D002535 ORTHO05D008858 5.4e-11 72.0 49 69.4
Hma1.2p1_0881F.1_g232060 Hydrangea macrophylla HOM05D002535 ORTHO05D008858 5.4e-11 72.0 49 69.4
Peaxi162Scf00947g00117 Petunia axillaris HOM05D002535 ORTHO05D008858 1.2e-10 70.9 49 69.4
Solyc02g078390.3 Solanum lycopersicum HOM05D002535 ORTHO05D008858 1.2e-10 70.9 49 69.4
Sopen02g023250 Solanum pennellii HOM05D002535 ORTHO05D008858 1.2e-10 70.9 49 69.4
CSS0043844 Camellia sinensis var. sinensis HOM05D002535 ORTHO05D008858 1.6e-10 70.5 49 71.4
Nitab4.5_0019564g0010 Nicotiana tabacum HOM05D002535 ORTHO05D008858 2.1e-10 70.1 53 66.0
CAN.G1164.16 Capsicum annuum HOM05D002535 ORTHO05D008858 4.6e-10 68.9 49 67.3
TAR624G1243 Trochodendron aralioides HOM05D002535 ORTHO05D008858 1.8e-09 67.0 49 65.3
Potri.004G041900 Populus trichocarpa HOM05D002535 ORTHO05D008858 2.3e-09 66.6 48 60.4
Oeu005075.2 Olea europaea HOM05D002535 ORTHO05D008858 3.0e-09 66.2 51 64.7
Rhsim13G0176900 Rhododendron simsii HOM05D002535 ORTHO05D008858 3.0e-09 66.2 48 68.8
Cc02_g13220 Coffea canephora HOM05D002535 ORTHO05D025122 3.9e-09 65.9 49 65.3
DCAR_028087 Daucus carota HOM05D002535 ORTHO05D008858 5.1e-09 65.5 48 66.7
Haze_06485 Corylus avellana HOM05D002535 ORTHO05D008858 6.7e-09 65.1 54 61.1
Nn1g04049 Nelumbo nucifera HOM05D002535 ORTHO05D008858 1.5e-08 63.9 49 63.3
Ah.14g089380 Amaranthus hybridus HOM05D002535 ORTHO05D008858 1.9e-08 63.5 49 69.4
Manes.17G044100 Manihot esculenta HOM05D002535 ORTHO05D008858 1.9e-08 63.5 47 61.7
Sabra04G0026000 Salix brachista HOM05D002535 ORTHO05D008858 1.9e-08 63.5 46 60.9
Aqoxy1G02517 Aquilegia oxysepala HOM05D002535 ORTHO05D008858 7.4e-08 61.6 49 59.2
CiPaw.10G047500 Carya illinoinensis HOM05D002535 ORTHO05D008858 9.6e-08 61.2 115 40.0
ClCG03G005960 Citrullus lanatus HOM05D002535 ORTHO05D008858 9.6e-08 61.2 47 63.8
Sc05g0007750 Simmondsia chinensis HOM05D002535 ORTHO05D025122 9.6e-08 61.2 48 60.4
QL05p039941 Quercus lobata HOM05D002535 ORTHO05D008858 1.6e-07 60.5 47 61.7
Cfa000431 Carpinus fangiana HOM05D002535 ORTHO05D008858 2.1e-07 60.1 47 66.0
HanXRQChr16g0517721 Helianthus annuus HOM05D002535 ORTHO05D008858 2.1e-07 60.1 47 61.7
MELO3C002594.2 Cucumis melo HOM05D002535 ORTHO05D008858 2.8e-07 59.7 47 59.6
MBI18_g16997_MAGBIO Magnolia biondii HOM05D002535 ORTHO05D008858 3.7e-07 59.3 49 59.2
PSO675G0269 Papaver somniferum HOM05D002535 ORTHO05D008858 4.8e-07 58.9 50 58.0
ECA234G1348 Erigeron canadensis HOM05D002535 ORTHO05D008858 1.1e-06 57.8 49 57.1
ATR0680G182 Amborella trichopoda HOM05D002535 ORTHO05D008858 1.4e-06 57.4 49 51.0
Sed0021234 Sechium edule HOM05D002535 ORTHO05D008858 1.4e-06 57.4 46 58.7
PGR004G2583 Punica granatum HOM05D002535 ORTHO05D008858 1.8e-06 57.0 44 54.5
Dinv07549 Davidia involucrata HOM05D002535 ORTHO05D008858 2.4e-06 56.6 49 55.1
Prupe.4G045200 Prunus persica HOM05D002535 ORTHO05D008858 2.4e-06 56.6 46 60.9
TWI38G0664 Tripterygium wilfordii HOM05D002535 ORTHO05D008858 2.4e-06 56.6 47 59.6
FAN11G0332 Fragaria x ananassa HOM05D002535 ORTHO05D008858 4.0e-06 55.8 46 56.5
CDE09G0049 Ceratophyllum demersum HOM05D002535 ORTHO05D008858 5.3e-06 55.5 45 55.6
FvH4_3g09390 Fragaria vesca HOM05D002535 ORTHO05D008858 5.3e-06 55.5 46 56.5
TPR.G40436 Trifolium pratense HOM05D002535 ORTHO05D025122 5.3e-06 55.5 49 55.1
Cpa.g.sc27.54 Carica papaya HOM05D002535 ORTHO05D008858 6.9e-06 55.1 47 59.6
CANSAT35G1983 Cannabis sativa HOM05D002535 ORTHO05D008858 9.0e-06 54.7 141 31.2
TPR.G12122 Trifolium pratense HOM05D002535 ORTHO05D008858 9.0e-06 54.7 49 53.1


User provided reference genes

Program Settings