Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold280G46873 Striga asiatica HOM05D000268 ORTHO05D004469 3.3e-67 258.1 115 100.0
SGA_v2.0_scaffold15G07183 Striga asiatica HOM05D000268 ORTHO05D004469 7.6e-32 140.6 102 66.7
Oeu027318.1 Olea europaea HOM05D000268 ORTHO05D004469 2.9e-31 138.7 103 63.1
Oeu027319.1 Olea europaea HOM05D000268 ORTHO05D004469 2.9e-31 138.7 103 63.1
SalBow1G1781 Salvia bowleyana HOM05D000268 ORTHO05D004469 1.6e-29 132.9 104 61.5
MSTRG.23812 Avicennia marina HOM05D000268 ORTHO05D004469 1.3e-28 129.8 101 59.4
unitig_736.g22253 Utricularia gibba HOM05D000268 ORTHO05D004469 2.8e-26 122.1 103 55.3
unitig_899.g15136 Utricularia gibba HOM05D000268 ORTHO05D004469 1.1e-22 110.2 97 54.6
Aqoxy5G01732 Aquilegia oxysepala HOM05D000268 ORTHO05D004469 5.1e-20 101.3 97 50.5
MD02G1157000 Malus domestica HOM05D000268 ORTHO05D004469 6.7e-20 100.9 101 53.5
Aa31LG7G13140 Aethionema arabicum HOM05D000268 ORTHO05D004469 4.1e-17 91.7 92 52.2
Carub.0004s0292 Capsella rubella HOM05D000268 ORTHO05D004469 4.1e-17 91.7 105 45.7
AL4G13740 Arabidopsis lyrata HOM05D000268 ORTHO05D004469 1.2e-16 90.1 106 45.3
AT2G23740 Arabidopsis thaliana HOM05D000268 ORTHO05D004469 1.5e-16 89.7 106 43.4
BcaB06g27931 Brassica carinata HOM05D000268 ORTHO05D004469 7.7e-16 87.4 93 46.2
HPP92_007809 Vanilla planifolia HOM05D000268 ORTHO05D004469 7.7e-16 87.4 109 41.3
Thhalv10000012m.g Eutrema salsugineum HOM05D000268 ORTHO05D004469 3.8e-15 85.1 108 40.7
THA.LOC104807561 Tarenaya hassleriana HOM05D000268 ORTHO05D004469 3.8e-15 85.1 101 44.6
CARHR114610 Cardamine hirsuta HOM05D000268 ORTHO05D004469 6.5e-15 84.3 101 42.6
Sp4g02670 Schrenkiella parvula HOM05D000268 ORTHO05D004469 6.5e-15 84.3 105 41.0
BcaC02g08548 Brassica carinata HOM05D000268 ORTHO05D004469 1.4e-14 83.2 92 43.5
C04p53050 Brassica napus HOM05D000268 ORTHO05D004469 1.4e-14 83.2 92 43.5
BolC4t26866H Brassica oleracea HOM05D000268 ORTHO05D004469 1.4e-14 83.2 92 43.5
BraA04t17428Z Brassica rapa HOM05D000268 ORTHO05D004469 1.4e-14 83.2 92 43.5
A04p18100 Brassica napus HOM05D000268 ORTHO05D004469 1.9e-14 82.8 95 45.3
Sed0027730 Sechium edule HOM05D000268 ORTHO05D004469 7.9e-13 77.4 100 44.0
MD15G1271600 Malus domestica HOM05D000268 ORTHO05D004469 3.9e-12 75.1 82 48.8
Nitab4.5_0004932g0040 Nicotiana tabacum HOM05D000268 ORTHO05D004469 2.8e-10 68.9 62 51.6
Actinidia36535 Actinidia chinensis HOM05D000268 ORTHO05D004469 4.8e-10 68.2 74 45.9
Nitab4.5_0000483g0060 Nicotiana tabacum HOM05D000268 ORTHO05D004469 8.2e-10 67.4 62 50.0
vmacro05281 Vaccinium macrocarpon HOM05D000268 ORTHO05D004469 1.1e-09 67.0 85 41.2
Ah.02g126300 Amaranthus hybridus HOM05D000268 ORTHO05D004469 1.4e-09 66.6 63 50.8
Cpa.g.sc15.107 Carica papaya HOM05D000268 ORTHO05D004469 1.4e-09 66.6 55 56.4
CAN.G836.12 Capsicum annuum HOM05D000268 ORTHO05D004469 1.8e-09 66.2 45 60.0
Lj7C14G2 Lonicera japonica HOM05D000268 ORTHO05D004469 1.8e-09 66.2 67 41.8
TAR625G1531 Trochodendron aralioides HOM05D000268 ORTHO05D004469 1.8e-09 66.2 36 69.4
TAR381G1430 Trochodendron aralioides HOM05D000268 ORTHO05D004469 2.4e-09 65.9 57 50.9
Actinidia12097 Actinidia chinensis HOM05D000268 ORTHO05D004469 3.1e-09 65.5 44 61.4
Haze_15153 Corylus avellana HOM05D000268 ORTHO05D004469 3.1e-09 65.5 60 50.0
Migut.H00513 Erythranthe guttata HOM05D000268 ORTHO05D004469 3.1e-09 65.5 39 71.8
DCAR_010955 Daucus carota HOM05D000268 ORTHO05D004469 4.1e-09 65.1 45 57.8
Dinv39934 Davidia involucrata HOM05D000268 ORTHO05D004469 4.1e-09 65.1 57 50.9
arahy.Tifrunner.gnm1.ann1.259MTB Arachis hypogaea HOM05D000268 ORTHO05D004469 6.9e-09 64.3 69 44.9
arahy.Tifrunner.gnm1.ann1.GI7SC3 Arachis hypogaea HOM05D000268 ORTHO05D004469 6.9e-09 64.3 69 44.9
CsaV3_6G042640 Cucumis sativus L. HOM05D000268 ORTHO05D004469 9.1e-09 63.9 83 43.4
RcHm_v2.0_Chr2g0103021 Rosa chinensis HOM05D000268 ORTHO05D004469 9.1e-09 63.9 61 50.8
TWI73G0223 Tripterygium wilfordii HOM05D000268 ORTHO05D004469 9.1e-09 63.9 49 57.1
FvH4_1g14350 Fragaria vesca HOM05D000268 ORTHO05D004469 1.2e-08 63.5 61 50.8
FAN19G2782 Fragaria x ananassa HOM05D000268 ORTHO05D004469 1.2e-08 63.5 61 50.8
FAN23G1146 Fragaria x ananassa HOM05D000268 ORTHO05D004469 1.2e-08 63.5 61 50.8
FAN28G1810 Fragaria x ananassa HOM05D000268 ORTHO05D004469 1.2e-08 63.5 61 50.8
Peaxi162Scf00535g00417 Petunia axillaris HOM05D000268 ORTHO05D004469 1.2e-08 63.5 36 69.4
QL06p044462 Quercus lobata HOM05D000268 ORTHO05D004469 1.2e-08 63.5 61 47.5
Rhsim10G0122500 Rhododendron simsii HOM05D000268 ORTHO05D004469 1.2e-08 63.5 81 40.7
Solyc02g089970.3 Solanum lycopersicum HOM05D000268 ORTHO05D004469 1.2e-08 63.5 39 64.1
Sopen02g034660 Solanum pennellii HOM05D000268 ORTHO05D004469 1.2e-08 63.5 39 64.1
FAN26G3224 Fragaria x ananassa HOM05D000268 ORTHO05D004469 1.5e-08 63.2 61 49.2
Prupe.7G146600 Prunus persica HOM05D000268 ORTHO05D004469 1.5e-08 63.2 39 64.1
CSS0018552 Camellia sinensis var. sinensis HOM05D000268 ORTHO05D004469 2.0e-08 62.8 44 56.8
CSS0040273 Camellia sinensis var. sinensis HOM05D000268 ORTHO05D004469 2.0e-08 62.8 44 56.8
Lj2g0022074 Lotus japonicus HOM05D000268 ORTHO05D004469 2.0e-08 62.8 32 78.1
Nn1g05132 Nelumbo nucifera HOM05D000268 ORTHO05D004469 2.6e-08 62.4 85 38.8
Phvul.002G024600 Phaseolus vulgaris HOM05D000268 ORTHO05D004469 4.5e-08 61.6 48 58.3
Potri.005G129800 Populus trichocarpa HOM05D000268 ORTHO05D004469 4.5e-08 61.6 55 50.9
CiPaw.01G030400 Carya illinoinensis HOM05D000268 ORTHO05D004469 5.9e-08 61.2 56 48.2
Glyma.01G180100 Glycine max HOM05D000268 ORTHO05D004469 5.9e-08 61.2 65 47.7
Gorai.003G018800 Gossypium raimondii HOM05D000268 ORTHO05D004469 5.9e-08 61.2 80 43.8
Manes.13G134300 Manihot esculenta HOM05D000268 ORTHO05D004469 5.9e-08 61.2 55 50.9
Psat2g163120 Pisum sativum HOM05D000268 ORTHO05D004469 5.9e-08 61.2 65 46.2
Potri.007G033000 Populus trichocarpa HOM05D000268 ORTHO05D004469 5.9e-08 61.2 51 54.9
Sc03g0001070 Simmondsia chinensis HOM05D000268 ORTHO05D004469 5.9e-08 61.2 53 50.9
AUR62008036 Chenopodium quinoa HOM05D000268 ORTHO05D004469 7.7e-08 60.8 52 51.9
PGR102G2765 Punica granatum HOM05D000268 ORTHO05D004469 7.7e-08 60.8 58 51.7
Sabra07G0028900 Salix brachista HOM05D000268 ORTHO05D004469 7.7e-08 60.8 51 54.9
EL10Ac6g14864 Beta vulgaris HOM05D000268 ORTHO05D004469 1.0e-07 60.5 59 45.8
Glyma.02G060500 Glycine max HOM05D000268 ORTHO05D004469 1.3e-07 60.1 34 73.5
Glyma.16G143100 Glycine max HOM05D000268 ORTHO05D004469 1.3e-07 60.1 34 73.5
Sabra05G0105100 Salix brachista HOM05D000268 ORTHO05D004469 1.3e-07 60.1 55 50.9
Atru.chr3.488 Acer truncatum HOM05D000268 ORTHO05D004469 1.7e-07 59.7 39 59.0
CANSAT01G2579 Cannabis sativa HOM05D000268 ORTHO05D004469 1.7e-07 59.7 32 71.9
Ciclev10024695m.g Citrus clementina HOM05D000268 ORTHO05D004469 1.7e-07 59.7 39 59.0
VMungo1215G1516 Vigna mungo HOM05D000268 ORTHO05D004469 1.7e-07 59.7 42 61.9
ECA232G0911 Erigeron canadensis HOM05D000268 ORTHO05D004469 2.2e-07 59.3 38 60.5
Lalb_Chr05g0227191 Lupinus albus HOM05D000268 ORTHO05D004469 2.2e-07 59.3 32 71.9
CiPaw.02G013900 Carya illinoinensis HOM05D000268 ORTHO05D004469 2.9e-07 58.9 34 64.7
Ca_24816_v3 Cicer arietinum L. HOM05D000268 ORTHO05D004469 2.9e-07 58.9 65 46.2
ClCG01G016320 Citrullus lanatus HOM05D000268 ORTHO05D004469 2.9e-07 58.9 81 42.0
Glyma.11G062100 Glycine max HOM05D000268 ORTHO05D004469 2.9e-07 58.9 32 71.9
Gohir.A02G162100 Gossypium hirsutum HOM05D000268 ORTHO05D004469 2.9e-07 58.9 78 43.6
Lalb_Chr05g0213051 Lupinus albus HOM05D000268 ORTHO05D004469 2.9e-07 58.9 47 59.6
AUR62003214 Chenopodium quinoa HOM05D000268 ORTHO05D004469 3.8e-07 58.5 30 73.3
COL.COLO4_22162 Corchorus olitorius HOM05D000268 ORTHO05D004469 3.8e-07 58.5 32 68.8
Gohir.D03G018300 Gossypium hirsutum HOM05D000268 ORTHO05D004469 3.8e-07 58.5 76 39.5
Medtr8g078700 Medicago truncatula HOM05D000268 ORTHO05D004469 3.8e-07 58.5 74 40.5
PSO170G1741 Papaver somniferum HOM05D000268 ORTHO05D004469 3.8e-07 58.5 33 72.7
PSO700G0125 Papaver somniferum HOM05D000268 ORTHO05D004469 3.8e-07 58.5 33 72.7
Hund14126 Selenicereus undatus HOM05D000268 ORTHO05D004469 3.8e-07 58.5 51 51.0
GSVIVG01019046001 Vitis vinifera HOM05D000268 ORTHO05D004469 3.8e-07 58.5 34 64.7
Eucgr.H01928 Eucalyptus grandis HOM05D000268 ORTHO05D004469 5.0e-07 58.2 48 54.2
arahy.Tifrunner.gnm1.ann1.ISY5ET Arachis hypogaea HOM05D000268 ORTHO05D004469 6.5e-07 57.8 43 62.8
CDE09G0016 Ceratophyllum demersum HOM05D000268 ORTHO05D004469 8.5e-07 57.4 32 68.8
Duzib187G0333 Durio zibethinus HOM05D000268 ORTHO05D004469 8.5e-07 57.4 27 77.8
SEGI_04650 Sequoiadendron giganteum HOM05D000268 ORTHO05D004469 8.5e-07 57.4 38 60.5
TPR.G12248 Trifolium pratense HOM05D000268 ORTHO05D004469 8.5e-07 57.4 90 36.7
ATR0733G136 Amborella trichopoda HOM05D000268 ORTHO05D004469 1.1e-06 57.0 33 66.7
Duzib264G0212 Durio zibethinus HOM05D000268 ORTHO05D004469 1.1e-06 57.0 32 65.6
Gohir.A02G162200 Gossypium hirsutum HOM05D000268 ORTHO05D004469 1.1e-06 57.0 32 65.6
Gohir.D03G018200 Gossypium hirsutum HOM05D000268 ORTHO05D004469 1.1e-06 57.0 32 65.6
Gorai.003G018700 Gossypium raimondii HOM05D000268 ORTHO05D004469 1.1e-06 57.0 32 65.6
TPR.G29867 Trifolium pratense HOM05D000268 ORTHO05D004469 1.1e-06 57.0 32 68.8
Medtr8g078490 Medicago truncatula HOM05D000268 ORTHO05D004469 1.4e-06 56.6 32 68.8
arahy.Tifrunner.gnm1.ann1.12AQES Arachis hypogaea HOM05D000268 ORTHO05D004469 1.9e-06 56.2 27 77.8
Lsat_1_v5_gn_4_176280 Lactuca sativa HOM05D000268 ORTHO05D004469 1.9e-06 56.2 31 64.5
Thecc.01G044200 Theobroma cacao HOM05D000268 ORTHO05D004469 1.9e-06 56.2 32 65.6
Ca_22239_v3 Cicer arietinum L. HOM05D000268 ORTHO05D004469 2.5e-06 55.8 40 52.5
HanXRQChr09g0265141 Helianthus annuus HOM05D000268 ORTHO05D004469 2.5e-06 55.8 33 63.6
Zm00001eb252300 Zea mays HOM05D000268 ORTHO05D004469 3.2e-06 55.5 36 52.8
MELO3C007503.2 Cucumis melo HOM05D000268 ORTHO05D004469 4.2e-06 55.1 27 77.8
Medtr5g018850 Medicago truncatula HOM05D000268 ORTHO05D004469 4.2e-06 55.1 27 77.8
Zm00001eb188560 Zea mays HOM05D000268 ORTHO05D004469 4.2e-06 55.1 36 55.6
Pp3c8_250 Physcomitrium patens HOM05D000268 ORTHO05D004469 5.5e-06 54.7 41 56.1
MBI16_g10970_MAGBIO Magnolia biondii HOM05D000268 ORTHO05D004469 9.4e-06 53.9 32 62.5


User provided reference genes

Program Settings