Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold277G46666 Striga asiatica HOM05D005745 ORTHO05D006857 3.4e-247 857.8 423 100.0
MSTRG.17255 Avicennia marina HOM05D005745 ORTHO05D006857 2.7e-159 565.8 435 68.3
PGSC0003DMG400021653 Solanum tuberosum HOM05D005745 ORTHO05D006857 4.8e-140 501.9 440 60.2
Sopen05g028140 Solanum pennellii HOM05D005745 ORTHO05D006857 6.3e-140 501.5 440 60.7
Solyc05g048810.4 Solanum lycopersicum HOM05D005745 ORTHO05D006857 4.1e-139 498.8 440 60.7
Hma1.2p1_0001F.1_g001520 Hydrangea macrophylla HOM05D005745 ORTHO05D006857 6.9e-139 498.0 438 60.7
CSS0024424 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 9.0e-139 497.7 423 61.9
CSS0038489 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 3.4e-138 495.7 423 61.5
CAN.G1535.1 Capsicum annuum HOM05D005745 ORTHO05D006857 2.9e-137 492.7 438 58.7
Dinv43791 Davidia involucrata HOM05D005745 ORTHO05D006857 7.9e-135 484.6 400 62.2
Oeu056358.1 Olea europaea HOM05D005745 ORTHO05D006857 7.9e-135 484.6 381 66.7
Peaxi162Scf00191g01322 Petunia axillaris HOM05D005745 ORTHO05D006857 3.9e-134 482.3 415 59.8
QL08p049437 Quercus lobata HOM05D005745 ORTHO05D006857 6.7e-134 481.5 415 60.5
Actinidia20926 Actinidia chinensis HOM05D005745 ORTHO05D006857 2.5e-133 479.6 441 59.6
GSVIVG01026870001 Vitis vinifera HOM05D005745 ORTHO05D006857 2.2e-132 476.5 434 59.2
Actinidia10034 Actinidia chinensis HOM05D005745 ORTHO05D006857 6.3e-132 474.9 423 60.5
Nitab4.5_0007346g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 1.8e-131 473.4 456 56.4
TAR367G0002 Trochodendron aralioides HOM05D005745 ORTHO05D006857 2.4e-131 473.0 419 59.7
Cc02_g37770 Coffea canephora HOM05D005745 ORTHO05D006857 2.0e-130 469.9 406 60.3
Sabra14G0059300 Salix brachista HOM05D005745 ORTHO05D006857 4.5e-130 468.8 427 58.1
MD01G1055100 Malus domestica HOM05D005745 ORTHO05D006857 1.0e-129 467.6 432 57.6
Manes.01G259400 Manihot esculenta HOM05D005745 ORTHO05D006857 3.8e-129 465.7 417 58.8
Gohir.A12G105400 Gossypium hirsutum HOM05D005745 ORTHO05D006857 5.0e-129 465.3 395 61.0
Gohir.D12G109300 Gossypium hirsutum HOM05D005745 ORTHO05D006857 2.5e-128 463.0 397 61.0
Gorai.008G118400 Gossypium raimondii HOM05D005745 ORTHO05D006857 2.7e-127 459.5 395 60.8
Lsat_1_v5_gn_7_5060 Lactuca sativa HOM05D005745 ORTHO05D006857 2.0e-125 453.4 412 59.5
FAN10G4182 Fragaria x ananassa HOM05D005745 ORTHO05D006857 2.6e-125 453.0 409 58.7
DCAR_015932 Daucus carota HOM05D005745 ORTHO05D006857 3.3e-125 452.6 409 58.9
Ciclev10020429m.g Citrus clementina HOM05D005745 ORTHO05D006857 5.7e-125 451.8 401 60.1
FAN06G1549 Fragaria x ananassa HOM05D005745 ORTHO05D006857 1.3e-124 450.7 418 57.9
Nn6g33496 Nelumbo nucifera HOM05D005745 ORTHO05D006857 1.7e-124 450.3 414 58.9
vmacro13297 Vaccinium macrocarpon HOM05D005745 ORTHO05D006857 1.7e-124 450.3 440 57.7
Cpa.g.sc18.234 Carica papaya HOM05D005745 ORTHO05D006857 4.8e-124 448.7 415 56.9
CiPaw.02G029400 Carya illinoinensis HOM05D005745 ORTHO05D006857 8.2e-124 448.0 412 58.0
Lj3g0021692 Lotus japonicus HOM05D005745 ORTHO05D006857 1.8e-123 446.8 404 59.2
CANSAT56G0536 Cannabis sativa HOM05D005745 ORTHO05D006857 9.1e-123 444.5 431 55.2
VMungo0331G1900 Vigna mungo HOM05D005745 ORTHO05D006857 2.6e-122 443.0 399 58.4
arahy.Tifrunner.gnm1.ann1.5YG8M2 Arachis hypogaea HOM05D005745 ORTHO05D006857 3.4e-122 442.6 402 59.0
ECA236G3051 Erigeron canadensis HOM05D005745 ORTHO05D006857 3.4e-122 442.6 410 58.0
arahy.Tifrunner.gnm1.ann1.JLYP5G Arachis hypogaea HOM05D005745 ORTHO05D006857 5.0e-121 438.7 402 58.7
Medtr8g031440 Medicago truncatula HOM05D005745 ORTHO05D006857 8.5e-121 438.0 392 59.7
Rhsim07G0017300 Rhododendron simsii HOM05D000683 ORTHO05D000507 1.6e-119 433.7 425 56.9
TWI23G0914 Tripterygium wilfordii HOM05D005745 ORTHO05D006857 2.3e-118 429.9 449 54.3
Haze_15472 Corylus avellana HOM05D005745 ORTHO05D006857 1.1e-117 427.6 434 53.7
Lj7C516G5 Lonicera japonica HOM05D005745 ORTHO05D006857 2.6e-117 426.4 380 61.1
CsaV3_6G000430 Cucumis sativus L. HOM05D005745 ORTHO05D006857 1.7e-116 423.7 402 55.2
BcaB03g13612 Brassica carinata HOM05D005745 ORTHO05D006857 2.2e-116 423.3 410 57.6
A10p00280 Brassica napus HOM05D005745 ORTHO05D006857 2.8e-116 422.9 414 55.8
Cfa003949 Carpinus fangiana HOM05D000683 ORTHO05D000507 2.8e-116 422.9 385 57.9
AL1G10580 Arabidopsis lyrata HOM05D005745 ORTHO05D006857 8.2e-116 421.4 416 55.8
Aqoxy7G00357 Aquilegia oxysepala HOM05D005745 ORTHO05D006857 1.1e-115 421.0 413 55.2
CARHR000560 Cardamine hirsuta HOM05D005745 ORTHO05D006857 1.4e-115 420.6 412 55.3
AUR62033312 Chenopodium quinoa HOM05D005745 ORTHO05D006857 4.1e-115 419.1 412 54.6
Lalb_Chr04g0256771 Lupinus albus HOM05D005745 ORTHO05D006857 2.6e-114 416.4 414 55.3
PSO782G5186 Papaver somniferum HOM05D005745 ORTHO05D006857 3.5e-114 416.0 417 54.7
AUR62033347 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.0e-113 414.5 408 54.7
Hund27291 Selenicereus undatus HOM05D005745 ORTHO05D006857 1.0e-113 414.5 425 54.4
BraA10t42305Z Brassica rapa HOM05D005745 ORTHO05D006857 1.3e-113 414.1 433 53.1
PGR042G0923 Punica granatum HOM05D005745 ORTHO05D006857 1.3e-113 414.1 420 53.6
Sc26g0000960 Simmondsia chinensis HOM05D005745 ORTHO05D006857 2.9e-113 412.9 402 55.7
PSO478G4474 Papaver somniferum HOM05D005745 ORTHO05D006857 3.8e-113 412.5 423 53.7
BolC5t28819H Brassica oleracea HOM05D005745 ORTHO05D006857 8.5e-113 411.4 424 54.5
Potri.014G081400 Populus trichocarpa HOM05D005745 ORTHO05D006857 2.5e-112 409.8 359 60.2
Thhalv10007725m.g Eutrema salsugineum HOM05D005745 ORTHO05D006857 3.2e-112 409.5 417 54.9
EL10Ac1g00543 Beta vulgaris HOM05D005745 ORTHO05D006857 4.2e-112 409.1 408 53.4
Carub.0001s0045 Capsella rubella HOM05D005745 ORTHO05D006857 5.5e-112 408.7 410 55.1
CiPaw.02G029100 Carya illinoinensis HOM05D005745 ORTHO05D006857 9.4e-112 407.9 416 54.3
C05p00290 Brassica napus HOM05D005745 ORTHO05D006857 4.7e-111 405.6 439 52.6
Sp1g00540 Schrenkiella parvula HOM05D005745 ORTHO05D006857 4.7e-111 405.6 409 54.8
Lalb_Chr10g0097191 Lupinus albus HOM05D005745 ORTHO05D006857 1.8e-110 403.7 400 53.2
Aa31LG1G11130 Aethionema arabicum HOM05D005745 ORTHO05D006857 8.8e-110 401.4 444 51.1
Duzib138G1514 Durio zibethinus HOM05D005745 ORTHO05D006857 8.8e-110 401.4 348 59.8
THA.LOC104817020 Tarenaya hassleriana HOM05D005745 ORTHO05D006857 1.5e-109 400.6 384 57.0
Eucgr.E00169 Eucalyptus grandis HOM05D005745 ORTHO05D006857 3.3e-109 399.4 439 50.3
Eucgr.E00173 Eucalyptus grandis HOM05D005745 ORTHO05D006857 3.7e-108 396.0 439 50.1
AT1G01760 Arabidopsis thaliana HOM05D005745 ORTHO05D006857 8.2e-108 394.8 384 56.8
HanXRQChr04g0121611 Helianthus annuus HOM05D005745 ORTHO05D006857 1.1e-107 394.4 349 60.5
Ca_23656_v3 Cicer arietinum L. HOM05D005745 ORTHO05D006857 4.1e-107 392.5 357 58.3
AUR62004330 Chenopodium quinoa HOM05D005745 ORTHO05D006857 2.7e-106 389.8 409 52.3
ClCG06G003860 Citrullus lanatus HOM05D005745 ORTHO05D006857 3.5e-106 389.4 466 47.0
Nitab4.5_0002262g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 2.9e-105 386.3 422 51.2
MBI17_g21972_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 1.0e-102 377.9 355 55.8
Gohir.A12G105450 Gossypium hirsutum HOM05D005745 ORTHO05D006857 3.0e-102 376.3 330 59.4
RcHm_v2.0_Chr1g0354081 Rosa chinensis HOM05D005745 ORTHO05D006857 1.7e-100 370.5 438 48.2
FAN03G1898 Fragaria x ananassa HOM05D005745 ORTHO05D006857 3.7e-100 369.4 405 51.1
Prupe.2G164800 Prunus persica HOM05D005745 ORTHO05D006857 4.1e-99 365.9 315 62.2
Ah.05g176680 Amaranthus hybridus HOM05D005745 ORTHO05D006857 1.6e-98 364.0 382 53.7
Sed0009525 Sechium edule HOM05D005745 ORTHO05D006857 1.6e-98 364.0 344 55.5
CiPaw.02G029200 Carya illinoinensis HOM05D005745 ORTHO05D006857 3.5e-98 362.8 353 55.5
HPP92_001499 Vanilla planifolia HOM05D005745 ORTHO05D006857 2.4e-91 340.1 367 51.0
FvH4_7g13861 Fragaria vesca HOM05D005745 ORTHO05D006857 1.2e-90 337.8 322 56.2
MBI18_g01486_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 1.2e-90 337.8 368 50.5
Mapoly0023s0060 Marchantia polymorpha HOM05D005745 ORTHO05D006857 2.6e-85 320.1 510 40.0
Glyma.07G073300 Glycine max HOM05D005745 ORTHO05D006857 1.4e-83 314.3 296 57.1
CDE06G1611 Ceratophyllum demersum HOM05D005745 ORTHO05D006857 1.9e-83 313.9 412 45.1
MELO3C021221.2 Cucumis melo HOM05D005745 ORTHO05D006857 7.8e-82 308.5 366 48.9
Zm00001eb067600 Zea mays HOM05D005745 ORTHO05D006857 1.5e-80 304.3 404 44.6
Psat4g154320 Pisum sativum HOM05D005745 ORTHO05D006857 2.5e-80 303.5 258 60.1
Phvul.010G096200 Phaseolus vulgaris HOM05D005745 ORTHO05D006857 3.6e-79 299.7 258 60.5
TPR.G39633 Trifolium pratense HOM05D005745 ORTHO05D006857 7.0e-75 285.4 221 63.8
Atru.BG.56.p Acer truncatum HOM05D005745 ORTHO05D006857 2.3e-70 270.4 330 48.2
Pp3c4_14060 Physcomitrium patens HOM05D005745 ORTHO05D006857 2.4e-67 260.4 505 34.1
FAN06G0933 Fragaria x ananassa HOM05D005745 ORTHO05D006857 4.6e-66 256.1 290 52.4
unitig_26.g9734 Utricularia gibba HOM05D005745 ORTHO05D006857 7.8e-66 255.4 337 47.8
AagrBONN_evm.TU.Sc2ySwM_362.160 Anthoceros agrestis HOM05D005745 ORTHO05D006857 1.4e-62 244.6 305 45.2
Prupe.2G165000 Prunus persica HOM05D005745 ORTHO05D006857 3.1e-62 243.4 405 41.0
Os04g0683500 Oryza sativa ssp. japonica HOM05D005745 ORTHO05D006857 8.9e-62 241.9 314 45.5
ATR0594G105 Amborella trichopoda HOM05D005745 ORTHO05D006857 5.8e-61 239.2 219 57.1
Glyma.03G013600 Glycine max HOM05D005745 ORTHO05D006857 1.4e-59 234.6 258 51.6
AUR62003100 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.9e-59 234.2 179 62.6
AUR62034353 Chenopodium quinoa HOM05D005745 ORTHO05D006857 6.0e-58 229.2 183 60.7
Thecc.01G362500 Theobroma cacao HOM05D005745 ORTHO05D006857 1.1e-56 224.9 231 54.1
SHI13462 Sapria himalayana HOM05D005745 ORTHO05D006857 3.6e-55 219.9 410 38.5
Zm00001eb420790 Zea mays HOM05D005745 ORTHO05D006857 1.5e-53 214.5 210 51.4
Oeu056357.1 Olea europaea HOM05D005745 ORTHO05D006857 7.6e-53 212.2 208 56.7
MD07G1140200 Malus domestica HOM05D005745 ORTHO05D006857 6.2e-47 192.6 312 41.3
SMO266G0032 Selaginella moellendorffii HOM05D005745 ORTHO05D006857 1.2e-45 188.3 251 43.8
Zm00001eb191880 Zea mays HOM05D009386 ORTHO05D006857 1.9e-43 181.0 203 49.3
SEGI_32011 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 3.0e-41 173.7 194 49.5
TPR.G4413 Trifolium pratense HOM05D005745 ORTHO05D006857 3.7e-39 166.8 163 57.1
MCO02G004 Micromonas commoda HOM05D005745 ORTHO05D006857 4.8e-39 166.4 424 33.7
Prupe.2G164500 Prunus persica HOM05D005745 ORTHO05D006857 1.5e-32 144.8 144 58.3
PRCOL_00000230 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 3.7e-31 140.2 416 30.5
AUR62019766 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.1e-30 138.7 108 58.3
AUR62034238 Chenopodium quinoa HOM05D002177 ORTHO05D002257 1.5e-29 134.8 110 57.3
SEGI_32349 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 2.6e-29 134.0 399 28.3
CBR_g12518 Chara braunii HOM05D004914 ORTHO05D006512 7.6e-29 132.5 824 22.3
Oeu056356.1 Olea europaea HOM05D005745 ORTHO05D006857 2.9e-28 130.6 99 70.7
Zm00001eb442120 Zea mays HOM05D009386 ORTHO05D006857 4.9e-28 129.8 116 56.0
Glyma.03G013550 Glycine max HOM05D005745 ORTHO05D006857 3.5e-26 123.6 88 68.2
Atru.chr5.475 Acer truncatum HOM05D005745 ORTHO05D006857 6.1e-26 122.9 88 67.0
EL10Ac7g17708 Beta vulgaris HOM05D005745 ORTHO05D006857 1.8e-25 121.3 85 70.6
COL.COLO4_12683 Corchorus olitorius HOM05D000683 ORTHO05D000507 4.8e-23 113.2 134 47.8
FAN01G0854 Fragaria x ananassa HOM05D005745 ORTHO05D006857 1.1e-22 112.1 178 40.4
MCO14G396 Micromonas commoda HOM05D005745 ORTHO05D006857 1.6e-18 98.2 296 30.7
Cre14.g629283 Chlamydomonas reinhardtii HOM05D005745 ORTHO05D006857 5.1e-17 93.2 96 54.2
MCO15G493 Micromonas commoda HOM05D005745 ORTHO05D006857 1.7e-12 78.2 343 24.8
PRCOL_00001873 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 2.7e-10 70.9 284 26.1
MD07G1140100 Malus domestica HOM05D005745 ORTHO05D006857 1.1e-08 65.5 62 50.0


User provided reference genes

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