Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold276G46631 Striga asiatica HOM05D006564 ORTHO05D007772 3.8e-249 864.4 433 100.0
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 4.4e-149 531.9 473 59.8
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 3.9e-129 465.7 405 61.2
Dinv24837 Davidia involucrata HOM05D006564 ORTHO05D007772 2.7e-114 416.4 422 52.4
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 1.2e-106 391.0 430 49.1
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 5.1e-105 385.6 436 48.9
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 4.6e-98 362.5 432 47.0
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 8.8e-97 358.2 465 45.2
Rhsim12G0044200 Rhododendron simsii HOM05D006564 ORTHO05D007772 4.8e-95 352.4 464 44.6
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 1.4e-94 350.9 437 46.0
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 2.6e-93 346.7 434 44.9
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 1.7e-92 344.0 436 46.1
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 3.8e-92 342.8 433 45.5
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 8.5e-92 341.7 433 46.4
Prupe.1G251700 Prunus persica HOM05D006564 ORTHO05D007772 2.5e-91 340.1 432 46.5
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 1.0e-89 334.7 409 46.2
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 1.4e-89 334.3 430 44.9
FvH4_4g34230 Fragaria vesca HOM05D006564 ORTHO05D007772 3.0e-89 333.2 439 42.8
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 3.9e-89 332.8 432 44.9
Cc11_g15240 Coffea canephora HOM05D006564 ORTHO05D007772 2.6e-88 330.1 452 44.0
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 2.6e-88 330.1 438 44.7
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 4.4e-88 329.3 431 44.3
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 1.7e-87 327.4 455 43.1
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 2.0e-85 320.5 431 43.9
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 2.0e-85 320.5 419 43.0
Gorai.010G099700 Gossypium raimondii HOM05D006564 ORTHO05D007772 5.9e-85 318.9 482 41.3
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 7.7e-85 318.5 436 42.2
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 1.0e-84 318.2 428 43.0
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 3.8e-84 316.2 443 41.3
VMungo1215G0480 Vigna mungo HOM05D006564 ORTHO05D007772 5.0e-84 315.8 433 42.3
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 1.1e-83 314.7 428 43.9
Migut.E00617 Erythranthe guttata HOM05D006564 ORTHO05D007772 1.9e-83 313.9 239 65.7
Gohir.D06G086400 Gossypium hirsutum HOM05D006564 ORTHO05D007772 2.5e-83 313.5 473 41.4
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 2.6e-80 303.5 429 42.4
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 9.7e-80 301.6 442 39.4
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 2.8e-79 300.1 457 39.6
Thhalv10023451m.g Eutrema salsugineum HOM05D006564 ORTHO05D007772 1.1e-78 298.1 424 40.6
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 1.4e-78 297.7 419 41.1
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 2.4e-78 297.0 426 40.1
Sed0020482 Sechium edule HOM05D006564 ORTHO05D007772 1.6e-77 294.3 431 38.5
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 4.5e-77 292.7 452 38.9
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 1.0e-76 291.6 427 40.7
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 2.2e-76 290.4 421 39.9
Carub.0002s0487 Capsella rubella HOM05D006564 ORTHO05D007772 2.2e-76 290.4 421 40.6
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 1.1e-75 288.1 421 40.1
AT1G60460 Arabidopsis thaliana HOM05D006564 ORTHO05D007772 1.5e-75 287.7 424 39.6
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 1.5e-75 287.7 432 39.4
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 3.2e-75 286.6 421 41.1
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 9.4e-75 285.0 421 40.9
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 1.2e-74 284.6 421 40.9
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 1.6e-74 284.3 425 38.8
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 3.6e-74 283.1 438 38.6
Oeu056406.1 Olea europaea HOM05D006564 ORTHO05D007772 8.0e-74 282.0 404 41.8
Actinidia01701 Actinidia chinensis HOM05D006564 ORTHO05D007772 8.8e-73 278.5 291 49.5
Cfa009164 Carpinus fangiana HOM05D006564 ORTHO05D007772 1.5e-72 277.7 374 44.4
BolC1t03666H Brassica oleracea HOM05D006564 ORTHO05D007772 5.7e-72 275.8 423 40.2
Manes.13G029100 Manihot esculenta HOM05D006564 ORTHO05D007772 5.7e-72 275.8 359 44.6
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 7.5e-72 275.4 428 41.8
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 1.3e-71 274.6 426 38.7
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 8.3e-71 271.9 420 41.4
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 1.1e-70 271.6 430 40.5
BcaB04g20267 Brassica carinata HOM05D006564 ORTHO05D007772 1.4e-70 271.2 456 38.2
Hund06003 Selenicereus undatus HOM05D006564 ORTHO05D007772 3.5e-69 266.5 327 45.6
Phvul.002G070600 Phaseolus vulgaris HOM05D006564 ORTHO05D007772 1.7e-68 264.2 437 37.3
CiPaw.05G152600 Carya illinoinensis HOM05D006564 ORTHO05D007772 6.5e-68 262.3 337 43.9
Sabra10G0025500 Salix brachista HOM05D006564 ORTHO05D007772 1.9e-67 260.8 459 36.4
Thecc.02G252200 Theobroma cacao HOM05D006564 ORTHO05D007772 2.5e-67 260.4 315 44.1
Lsat_1_v5_gn_4_5380 Lactuca sativa HOM05D006564 ORTHO05D007772 3.6e-66 256.5 360 41.7
RcHm_v2.0_Chr4g0443691 Rosa chinensis HOM05D006564 ORTHO05D007772 1.1e-62 245.0 295 43.4
CsaV3_2G024630 Cucumis sativus L. HOM05D006564 ORTHO05D007772 3.8e-60 236.5 438 35.8
MELO3C010665.2 Cucumis melo HOM05D006564 ORTHO05D007772 1.1e-59 235.0 453 35.3
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 1.5e-59 234.6 507 33.3
unitig_744.g23977 Utricularia gibba HOM05D006564 ORTHO05D007772 1.5e-59 234.6 434 37.3
FAN17G1546 Fragaria x ananassa HOM05D006564 ORTHO05D007772 2.1e-58 230.7 298 40.9
FAN07G0775 Fragaria x ananassa HOM05D006564 ORTHO05D007772 8.0e-58 228.8 451 35.7
Glyma.02G035501 Glycine max HOM05D006564 ORTHO05D007772 4.0e-49 199.9 208 50.0
AUR62014056 Chenopodium quinoa HOM05D006564 ORTHO05D007772 1.5e-48 198.0 442 33.0
Lalb_Chr05g0216821 Lupinus albus HOM05D006564 ORTHO05D007772 1.3e-47 194.9 316 38.9
Ca_03150_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 2.9e-47 193.7 221 48.0
Lj3A1053G47 Lonicera japonica HOM05D006564 ORTHO05D007772 1.4e-46 191.4 191 50.8
Sopen06g024060 Solanum pennellii HOM05D006564 ORTHO05D007772 1.2e-45 188.3 259 39.4
Nitab4.5_0003128g0060 Nicotiana tabacum HOM05D006564 ORTHO05D007772 3.9e-44 183.3 400 33.5
AUR62005394 Chenopodium quinoa HOM05D006564 ORTHO05D007772 5.0e-44 183.0 452 31.9
PGSC0003DMG401026086 Solanum tuberosum HOM05D006564 ORTHO05D007772 2.6e-40 170.6 341 35.5
Sc04g0009220 Simmondsia chinensis HOM05D006564 ORTHO05D007772 5.1e-36 156.4 398 30.4
Zm00001eb227420 Zea mays HOM05D006564 ORTHO05D007772 2.5e-35 154.1 256 39.8
HanXRQChr12g0383581 Helianthus annuus HOM05D006564 ORTHO05D007772 2.9e-31 140.6 179 42.5
Lj3A1053T43 Lonicera japonica HOM05D006564 ORTHO05D007772 5.1e-28 129.8 138 53.6
ATR1091G047 Amborella trichopoda HOM05D006564 ORTHO05D007772 1.8e-25 121.3 169 41.4
Lalb_Chr05g0216811 Lupinus albus HOM05D006564 ORTHO05D007772 1.8e-25 121.3 123 52.0
FAN22G1362 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.4e-22 111.7 136 49.3
RcHm_v2.0_Chr4g0443681 Rosa chinensis HOM05D006564 ORTHO05D007772 3.2e-22 110.5 136 49.3
Eucgr.H02586 Eucalyptus grandis HOM05D006564 ORTHO05D007772 5.4e-22 109.8 118 50.8
TAR374G1125 Trochodendron aralioides HOM05D006564 ORTHO05D007772 5.4e-22 109.8 213 36.6
ClCG08G018020 Citrullus lanatus HOM05D006564 ORTHO05D007772 7.1e-22 109.4 137 43.8
FAN12G0482 Fragaria x ananassa HOM05D006564 ORTHO05D007772 6.0e-21 106.3 133 46.6
HPP92_021828 Vanilla planifolia HOM05D006564 ORTHO05D007772 3.4e-16 90.5 406 24.9
Actinidia01700 Actinidia chinensis HOM05D006564 ORTHO05D007772 5.4e-14 83.2 138 38.4
SHI17558 Sapria himalayana HOM05D006564 ORTHO05D007772 4.6e-13 80.1 66 56.1
SEGI_36736 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 1.7e-12 78.2 120 37.5
CDE07G0681 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 2.3e-12 77.8 293 24.6
Pp3c7_26620 Physcomitrium patens HOM05D006564 ORTHO05D007772 1.5e-11 75.1 448 22.1
CDE06G0043 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 4.3e-11 73.6 70 52.9
SHI17545 Sapria himalayana HOM05D006564 ORTHO05D007772 2.4e-09 67.8 109 34.9
Cpa.g.sc69.59 Carica papaya HOM05D006564 ORTHO05D007772 2.0e-08 64.7 105 39.0
Hund06002 Selenicereus undatus HOM05D006564 ORTHO05D007772 4.5e-08 63.5 99 40.4
Ca_03152_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 7.6e-08 62.8 73 39.7
AagrBONN_evm.TU.Sc2ySwM_362.2494 Anthoceros agrestis HOM05D006564 ORTHO05D007772 9.9e-08 62.4 368 21.7
Os06g0708200 Oryza sativa ssp. japonica HOM05D006564 ORTHO05D007772 6.4e-07 59.7 115 38.3


User provided reference genes

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