Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold257G45692 Striga asiatica HOM05D000992 ORTHO05D001928 4.8e-79 297.7 149 100.0
SGA_v2.0_scaffold39G15183 Striga asiatica HOM05D000992 ORTHO05D001928 3.2e-30 135.6 88 73.9
SalBow8G2514 Salvia bowleyana HOM05D000992 ORTHO05D001928 2.1e-21 106.3 82 67.1
Migut.E00433 Erythranthe guttata HOM05D000992 ORTHO05D001928 8.1e-18 94.4 88 59.1
SalBow7G0291 Salvia bowleyana HOM05D000992 ORTHO05D001928 1.1e-17 94.0 80 60.0
SalBow1G5429 Salvia bowleyana HOM05D000992 ORTHO05D001928 2.6e-16 89.4 85 60.0
Actinidia04063 Actinidia chinensis HOM05D000992 ORTHO05D001928 2.2e-15 86.3 89 52.8
PGR119G0308 Punica granatum HOM05D000992 ORTHO05D001928 2.4e-14 82.8 78 53.8
DCAR_007301 Daucus carota HOM05D000992 ORTHO05D001928 3.2e-14 82.4 73 57.5
Dinv14423 Davidia involucrata HOM05D000992 ORTHO05D001928 5.4e-14 81.6 102 46.1
Actinidia18442 Actinidia chinensis HOM05D000992 ORTHO05D001928 7.1e-14 81.3 82 54.9
Lsat_1_v5_gn_1_4261 Lactuca sativa HOM05D000992 ORTHO05D001928 9.3e-14 80.9 79 53.2
HanXRQChr12g0377541 Helianthus annuus HOM05D000992 ORTHO05D001928 1.2e-13 80.5 74 55.4
Dinv07657 Davidia involucrata HOM05D000269 ORTHO05D000216 1.6e-13 80.1 90 48.9
Nitab4.5_0007845g0030 Nicotiana tabacum HOM05D000992 ORTHO05D001928 2.1e-13 79.7 85 45.9
AUR62023333 Chenopodium quinoa HOM05D000992 ORTHO05D001928 3.5e-13 79.0 78 53.8
Dinv35242 Davidia involucrata HOM05D006627 ORTHO05D007753 7.9e-13 77.8 101 45.5
HanXRQChr11g0320951 Helianthus annuus HOM05D000992 ORTHO05D001928 7.9e-13 77.8 77 50.6
Ah.05g177390 Amaranthus hybridus HOM05D000992 ORTHO05D001928 1.0e-12 77.4 71 49.3
Haze_10992 Corylus avellana HOM05D000992 ORTHO05D001928 1.0e-12 77.4 88 47.7
Sc10g0008370 Simmondsia chinensis HOM05D000992 ORTHO05D001928 1.0e-12 77.4 87 44.8
Lj5g0010526 Lotus japonicus HOM05D000992 ORTHO05D001928 1.8e-12 76.6 78 51.3
Nitab4.5_0000441g0190 Nicotiana tabacum HOM05D000992 ORTHO05D001928 1.8e-12 76.6 85 49.4
AUR62038000 Chenopodium quinoa HOM05D000992 ORTHO05D001928 2.3e-12 76.3 72 51.4
Manes.17G077900 Manihot esculenta HOM05D000992 ORTHO05D001928 2.3e-12 76.3 99 46.5
Nn4g24190 Nelumbo nucifera HOM05D000992 ORTHO05D001928 2.3e-12 76.3 90 48.9
Potri.008G130300 Populus trichocarpa HOM05D000992 ORTHO05D001928 2.3e-12 76.3 83 48.2
PGSC0003DMG400006156 Solanum tuberosum HOM05D000992 ORTHO05D001928 2.3e-12 76.3 79 46.8
Cfa008618 Carpinus fangiana HOM05D000992 ORTHO05D001928 8.7e-12 74.3 88 45.5
EL10Ac1g00687 Beta vulgaris HOM05D000992 ORTHO05D001928 1.1e-11 73.9 75 54.7
Lsat_1_v5_gn_9_43601 Lactuca sativa HOM05D000992 ORTHO05D001928 1.1e-11 73.9 85 44.7
TWI31G0575 Tripterygium wilfordii HOM05D000992 ORTHO05D001928 1.1e-11 73.9 102 39.2
CSS0018449 Camellia sinensis var. sinensis HOM05D000992 ORTHO05D001928 1.5e-11 73.6 88 44.3
Ca_18738_v3 Cicer arietinum L. HOM05D000992 ORTHO05D001928 1.5e-11 73.6 83 48.2
Ca_30875_v3 Cicer arietinum L. HOM05D000992 ORTHO05D001928 1.5e-11 73.6 83 48.2
CARHR257330 Cardamine hirsuta HOM05D000992 ORTHO05D001928 1.9e-11 73.2 74 47.3
HanXRQChr02g0044681 Helianthus annuus HOM05D000992 ORTHO05D001928 1.9e-11 73.2 73 50.7
vmacro00410 Vaccinium macrocarpon HOM05D000992 ORTHO05D001928 1.9e-11 73.2 82 47.6
Sabra08G0098900 Salix brachista HOM05D000992 ORTHO05D001928 2.5e-11 72.8 87 46.0
TWI75G1486 Tripterygium wilfordii HOM05D000992 ORTHO05D001928 2.5e-11 72.8 89 43.8
TAR371G0875 Trochodendron aralioides HOM05D000992 ORTHO05D001928 2.5e-11 72.8 106 41.5
arahy.Tifrunner.gnm1.ann1.MZBU3F Arachis hypogaea HOM05D000992 ORTHO05D001928 4.3e-11 72.0 90 43.3
CANSAT64G2027 Cannabis sativa HOM05D000992 ORTHO05D001928 4.3e-11 72.0 80 47.5
Aqoxy7G00061 Aquilegia oxysepala HOM05D000992 ORTHO05D001928 5.6e-11 71.6 83 47.0
Gohir.A07G097700 Gossypium hirsutum HOM05D000992 ORTHO05D001928 5.6e-11 71.6 94 40.4
Gohir.D07G102000 Gossypium hirsutum HOM05D000992 ORTHO05D001928 5.6e-11 71.6 94 40.4
Oeu005277.1 Olea europaea HOM05D000992 ORTHO05D001928 5.6e-11 71.6 91 41.8
Gorai.001G109900 Gossypium raimondii HOM05D000992 ORTHO05D001928 7.4e-11 71.2 94 39.4
Rhsim03G0184600 Rhododendron simsii HOM05D000992 ORTHO05D001928 7.4e-11 71.2 80 45.0
THA.LOC104805068 Tarenaya hassleriana HOM05D000992 ORTHO05D001928 7.4e-11 71.2 76 46.1
Thecc.02G282800 Theobroma cacao HOM05D000992 ORTHO05D001928 7.4e-11 71.2 98 37.8
unitig_22.g5587 Utricularia gibba HOM05D000992 ORTHO05D001928 7.4e-11 71.2 72 48.6
arahy.Tifrunner.gnm1.ann1.FYKT6P Arachis hypogaea HOM05D000992 ORTHO05D001928 9.6e-11 70.9 89 42.7
ClCG11G001240 Citrullus lanatus HOM05D000992 ORTHO05D001928 9.6e-11 70.9 93 41.9
Lalb_Chr16g0385011 Lupinus albus HOM05D000992 ORTHO05D001928 9.6e-11 70.9 91 41.8
CsaV3_5G013310 Cucumis sativus L. HOM05D000992 ORTHO05D001928 1.6e-10 70.1 92 44.6
Lalb_Chr05g0219541 Lupinus albus HOM05D000992 ORTHO05D001928 1.6e-10 70.1 92 41.3
QL11p050299 Quercus lobata HOM05D000992 ORTHO05D001928 1.6e-10 70.1 80 47.5
Duzib248G0828 Durio zibethinus HOM05D000992 ORTHO05D001928 2.1e-10 69.7 89 43.8
Glyma.07G218700 Glycine max HOM05D000992 ORTHO05D001928 2.1e-10 69.7 88 42.0
TPR.G27486 Trifolium pratense HOM05D000992 ORTHO05D001928 3.7e-10 68.9 83 45.8
Eucgr.G02182 Eucalyptus grandis HOM05D000992 ORTHO05D001928 4.8e-10 68.6 82 46.3
RcHm_v2.0_Chr4g0441451 Rosa chinensis HOM05D000992 ORTHO05D001928 6.2e-10 68.2 83 44.6
CDE02G4261 Ceratophyllum demersum HOM05D000992 ORTHO05D001928 8.1e-10 67.8 79 41.8
Medtr4g084650 Medicago truncatula HOM05D000992 ORTHO05D001928 8.1e-10 67.8 87 43.7
ECA232G2145 Erigeron canadensis HOM05D000992 ORTHO05D001928 1.4e-09 67.0 74 45.9
Hund17156 Selenicereus undatus HOM05D000992 ORTHO05D001928 1.4e-09 67.0 115 34.8
FvH4_4g32580 Fragaria vesca HOM05D000992 ORTHO05D001928 1.8e-09 66.6 73 45.2
MD13G1024400 Malus domestica HOM05D000992 ORTHO05D001928 1.8e-09 66.6 85 40.0
FAN07G2064 Fragaria x ananassa HOM05D000992 ORTHO05D001928 3.1e-09 65.9 73 45.2
FAN12G1857 Fragaria x ananassa HOM05D000992 ORTHO05D001928 3.1e-09 65.9 73 45.2
CiPaw.06G011200 Carya illinoinensis HOM05D000992 ORTHO05D001928 5.3e-09 65.1 92 39.1
Duzib251G0427 Durio zibethinus HOM05D000992 ORTHO05D001928 5.3e-09 65.1 91 38.5
Phvul.002G095100 Phaseolus vulgaris HOM05D000992 ORTHO05D001928 5.3e-09 65.1 96 43.8
HPP92_027233 Vanilla planifolia HOM05D000992 ORTHO05D001928 5.3e-09 65.1 92 44.6
ECA247G3162 Erigeron canadensis HOM05D000992 ORTHO05D001928 1.2e-08 63.9 83 43.4
Hma1.2p1_1346F.1_g277200 Hydrangea macrophylla HOM05D000992 ORTHO05D001928 1.2e-08 63.9 80 45.0
Hma1.2p1_1764F.1_g301400 Hydrangea macrophylla HOM05D000992 ORTHO05D001928 1.2e-08 63.9 80 45.0
TAR629G1759 Trochodendron aralioides HOM05D000992 ORTHO05D001928 1.2e-08 63.9 91 42.9
FAN17G2843 Fragaria x ananassa HOM05D000992 ORTHO05D001928 1.5e-08 63.5 73 43.8
Sp2g12920 Schrenkiella parvula HOM05D000992 ORTHO05D001928 2.6e-08 62.8 89 39.3
BcaC03g17042 Brassica carinata HOM05D000992 ORTHO05D001928 4.5e-08 62.0 92 38.0
BolC2t11036H Brassica oleracea HOM05D000992 ORTHO05D001928 4.5e-08 62.0 92 38.0
Carub.0005s0043 Capsella rubella HOM05D000992 ORTHO05D001928 7.6e-08 61.2 83 39.8
C02p49570 Brassica napus HOM05D000992 ORTHO05D001928 9.9e-08 60.8 92 37.0
MD16G1027100 Malus domestica HOM05D000992 ORTHO05D001928 9.9e-08 60.8 92 35.9
VMungo0251G1193 Vigna mungo HOM05D000992 ORTHO05D001928 1.3e-07 60.5 96 39.6
Cc11_g08530 Coffea canephora HOM05D000992 ORTHO05D001928 1.7e-07 60.1 79 45.6
Pp3c22_1410 Physcomitrium patens HOM05D000992 ORTHO05D001928 3.8e-07 58.9 69 46.4
BolC7t43735H Brassica oleracea HOM05D000992 ORTHO05D001928 4.9e-07 58.5 77 39.0
BcaC06g34176 Brassica carinata HOM05D000137 ORTHO05D001928 6.4e-07 58.2 77 39.0
A06p44420 Brassica napus HOM05D000992 ORTHO05D001928 6.4e-07 58.2 72 37.5
C07p31890 Brassica napus HOM05D000992 ORTHO05D001928 6.4e-07 58.2 77 39.0
BraA06t27316Z Brassica rapa HOM05D000992 ORTHO05D001928 6.4e-07 58.2 72 37.5
QL01p001467 Quercus lobata HOM05D000992 ORTHO05D001928 1.1e-06 57.4 81 39.5
QL02p040832 Quercus lobata HOM05D000992 ORTHO05D001928 1.9e-06 56.6 83 38.6
Sopen07g024400 Solanum pennellii HOM05D000992 ORTHO05D001928 2.4e-06 56.2 79 36.7
Actinidia04657 Actinidia chinensis HOM05D000992 ORTHO05D001928 4.2e-06 55.5 36 72.2
Rhsim06G0241000 Rhododendron simsii HOM05D000992 ORTHO05D001928 5.5e-06 55.1 91 35.2
Solyc07g047970.4 Solanum lycopersicum HOM05D000992 ORTHO05D001928 7.1e-06 54.7 79 38.0
CSS0042156 Camellia sinensis var. sinensis HOM05D000992 ORTHO05D001928 9.3e-06 54.3 51 52.9


User provided reference genes

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