Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10647 Striga asiatica HOM05D006697 ORTHO05D008161 1.2e-135 486.5 243 100.0
Migut.C01379 Erythranthe guttata HOM05D006697 ORTHO05D008161 1.4e-112 409.8 240 84.6
SGA_v2.0_scaffold147G36299 Striga asiatica HOM05D006697 ORTHO05D008161 3.9e-102 375.2 228 86.0
Potri.001G377100 Populus trichocarpa HOM05D006697 ORTHO05D008161 5.6e-101 371.3 241 74.7
Lj5C630T5 Lonicera japonica HOM05D006697 ORTHO05D008161 9.0e-99 364.0 227 75.8
Actinidia03526 Actinidia chinensis HOM05D006697 ORTHO05D008161 1.2e-98 363.6 246 71.5
Sabra16G0248400 Salix brachista HOM05D006697 ORTHO05D008161 1.5e-98 363.2 251 70.9
QL09p001838 Quercus lobata HOM05D006697 ORTHO05D008161 3.4e-98 362.1 232 72.0
CiPaw.04G009300 Carya illinoinensis HOM05D006697 ORTHO05D008161 9.9e-98 360.5 231 73.6
Dinv22109 Davidia involucrata HOM05D006697 ORTHO05D008161 1.3e-97 360.1 243 71.6
QL11p001773 Quercus lobata HOM05D006697 ORTHO05D008161 2.2e-97 359.4 232 71.6
SalBow7G2072 Salvia bowleyana HOM05D006697 ORTHO05D008161 8.4e-97 357.5 289 65.7
Atru.chr13.2506 Acer truncatum HOM05D006697 ORTHO05D008161 4.2e-96 355.1 240 70.4
Lj7A235T22 Lonicera japonica HOM05D006697 ORTHO05D008161 5.4e-96 354.8 221 76.5
Sopen06g023040 Solanum pennellii HOM05D006697 ORTHO05D008161 7.1e-96 354.4 247 67.6
GSVIVG01036291001 Vitis vinifera HOM05D006697 ORTHO05D008161 7.1e-96 354.4 221 73.3
Atru.chr13.2494 Acer truncatum HOM05D006697 ORTHO05D008161 1.2e-95 353.6 240 70.0
AUR62038532 Chenopodium quinoa HOM05D006697 ORTHO05D008161 1.6e-95 353.2 230 70.9
PGSC0003DMG400033140 Solanum tuberosum HOM05D006697 ORTHO05D008161 2.1e-95 352.8 236 69.1
TWI12G1402 Tripterygium wilfordii HOM05D006697 ORTHO05D008161 2.7e-95 352.4 234 69.2
MBI04_g46123_MAGBIO Magnolia biondii HOM05D006697 ORTHO05D008161 3.5e-95 352.1 231 73.2
AUR62013379 Chenopodium quinoa HOM05D006697 ORTHO05D008161 1.0e-94 350.5 230 70.4
Aqoxy7G01951 Aquilegia oxysepala HOM05D006697 ORTHO05D008161 6.6e-94 347.8 233 70.8
Ah.05g170350 Amaranthus hybridus HOM05D006697 ORTHO05D008161 8.7e-94 347.4 227 69.2
Ciclev10024137m.g Citrus clementina HOM05D006697 ORTHO05D008161 1.5e-93 346.7 221 71.9
Hma1.2p1_0417F.1_g148910 Hydrangea macrophylla HOM05D006697 ORTHO05D008161 1.5e-93 346.7 228 69.7
CANSAT21G1464 Cannabis sativa HOM05D006697 ORTHO05D008161 1.9e-93 346.3 233 71.2
Solyc06g064560.4 Solanum lycopersicum HOM05D006697 ORTHO05D008161 1.9e-93 346.3 245 67.3
CANSAT21G1945 Cannabis sativa HOM05D006697 ORTHO05D008161 3.3e-93 345.5 229 72.1
HanXRQChr08g0227531 Helianthus annuus HOM05D006697 ORTHO05D008161 4.3e-93 345.1 232 69.4
Cc10_g08640 Coffea canephora HOM05D006697 ORTHO05D008161 9.6e-93 344.0 221 74.2
EL10Ac1g01267 Beta vulgaris HOM05D006697 ORTHO05D008161 1.3e-92 343.6 227 68.7
TPR.G29429 Trifolium pratense HOM05D006697 ORTHO05D008161 6.2e-92 341.3 239 68.2
COL.COLO4_05203 Corchorus olitorius HOM05D006697 ORTHO05D008161 2.4e-91 339.3 242 67.4
Ca_26167_v3 Cicer arietinum L. HOM05D006697 ORTHO05D008161 3.1e-91 339.0 236 69.5
Lj3g0000289 Lotus japonicus HOM05D006697 ORTHO05D008161 3.1e-91 339.0 242 67.8
Sc23g0000070 Simmondsia chinensis HOM05D006697 ORTHO05D008161 3.1e-91 339.0 224 69.6
Psat1g020920 Pisum sativum HOM05D006697 ORTHO05D008161 4.0e-91 338.6 239 68.2
Peaxi162Scf00818g00536 Petunia axillaris HOM05D006697 ORTHO05D008161 1.2e-90 337.0 226 69.5
Duzib213G0772 Durio zibethinus HOM05D006697 ORTHO05D008161 4.5e-90 335.1 224 71.0
CsaV3_2G033200 Cucumis sativus L. HOM05D006697 ORTHO05D008161 9.9e-90 334.0 224 68.8
CAN.G14.56 Capsicum annuum HOM05D006697 ORTHO05D008161 1.3e-89 333.6 221 71.5
Sed0014406 Sechium edule HOM05D006697 ORTHO05D008161 1.3e-89 333.6 225 67.6
PGR044G1078 Punica granatum HOM05D006697 ORTHO05D008161 2.2e-89 332.8 222 71.2
Glyma.11G110500 Glycine max HOM05D006697 ORTHO05D008161 1.1e-88 330.5 256 63.7
ClCG11G008450 Citrullus lanatus HOM05D006697 ORTHO05D008161 1.9e-88 329.7 230 66.1
Thecc.08G178500 Theobroma cacao HOM05D006697 ORTHO05D008161 1.9e-88 329.7 243 65.8
Haze_13956 Corylus avellana HOM05D006697 ORTHO05D008161 2.4e-88 329.3 219 70.8
VMungo1127G1290 Vigna mungo HOM05D006697 ORTHO05D008161 2.4e-88 329.3 239 66.5
Gorai.009G352800 Gossypium raimondii HOM05D006697 ORTHO05D008161 5.4e-88 328.2 236 67.4
Gohir.D05G329400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 7.1e-88 327.8 236 67.4
Medtr2g010410 Medicago truncatula HOM05D006697 ORTHO05D008161 9.3e-88 327.4 236 65.7
THA.LOC104814608 Tarenaya hassleriana HOM05D006697 ORTHO05D008161 9.3e-88 327.4 224 67.9
PSO170G3180 Papaver somniferum HOM05D006697 ORTHO05D008161 1.6e-87 326.6 236 64.8
Phvul.011G017400 Phaseolus vulgaris HOM05D006697 ORTHO05D008161 2.1e-87 326.2 243 64.6
arahy.Tifrunner.gnm1.ann1.6HI5DG Arachis hypogaea HOM05D006697 ORTHO05D008161 2.7e-87 325.9 240 65.8
arahy.Tifrunner.gnm1.ann1.L3LJ1W Arachis hypogaea HOM05D006697 ORTHO05D008161 3.5e-87 325.5 240 65.8
arahy.Tifrunner.gnm1.ann1.D2QDKL Arachis hypogaea HOM05D006697 ORTHO05D008161 7.9e-87 324.3 240 64.6
PGR044G1872 Punica granatum HOM05D006697 ORTHO05D008161 1.3e-86 323.6 224 69.2
Cpa.g.sc21.84 Carica papaya HOM05D006697 ORTHO05D008161 5.1e-86 321.6 233 65.7
vmacro17835 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 6.7e-86 321.2 236 65.7
Os05g0588200 Oryza sativa ssp. japonica HOM05D006697 ORTHO05D008161 1.5e-85 320.1 224 67.4
Nitab4.5_0002654g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 4.3e-85 318.5 247 64.4
HPP92_021529 Vanilla planifolia HOM05D006697 ORTHO05D008161 9.6e-85 317.4 232 64.7
HPP92_021490 Vanilla planifolia HOM05D006697 ORTHO05D008161 1.6e-84 316.6 232 64.7
Nn8g39331 Nelumbo nucifera HOM05D006697 ORTHO05D008161 2.1e-84 316.2 233 66.5
Aa31LG2G660 Aethionema arabicum HOM05D006697 ORTHO05D008161 2.8e-84 315.8 247 62.8
FvH4_2g00851 Fragaria vesca HOM05D006697 ORTHO05D008161 3.7e-84 315.5 224 67.4
MD05G1004600 Malus domestica HOM05D006697 ORTHO05D008161 1.4e-83 313.5 235 64.3
FAN27G1710 Fragaria x ananassa HOM05D006697 ORTHO05D008161 2.4e-83 312.8 225 66.2
vmacro14431 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 2.6e-82 309.3 264 59.1
Carub.0001s1251 Capsella rubella HOM05D006697 ORTHO05D008161 4.5e-82 308.5 241 63.1
AL1G24400 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 9.9e-82 307.4 241 62.2
RcHm_v2.0_Chr6g0251241 Rosa chinensis HOM05D006697 ORTHO05D008161 9.9e-82 307.4 224 64.7
Zm00001eb345090 Zea mays HOM05D006697 ORTHO05D008161 2.2e-81 306.2 234 61.5
ECA247G0072 Erigeron canadensis HOM05D006697 ORTHO05D008161 1.9e-80 303.1 219 66.2
AT1G12790 Arabidopsis thaliana HOM05D006697 ORTHO05D008161 2.5e-80 302.8 224 63.8
Thhalv10008579m.g Eutrema salsugineum HOM05D006697 ORTHO05D008161 4.2e-80 302.0 241 59.8
CARHR013100 Cardamine hirsuta HOM05D006697 ORTHO05D008161 5.5e-80 301.6 242 61.2
Manes.02G201500 Manihot esculenta HOM05D006697 ORTHO05D008161 6.0e-79 298.1 239 63.2
Sp1g11350 Schrenkiella parvula HOM05D006697 ORTHO05D008161 6.0e-79 298.1 240 59.6
Hund16916 Selenicereus undatus HOM05D006697 ORTHO05D008161 5.1e-78 295.0 227 63.0
Lj7C240T16 Lonicera japonica HOM05D006697 ORTHO05D008161 5.6e-77 291.6 222 67.1
TAR625G0361 Trochodendron aralioides HOM05D006697 ORTHO05D008161 8.2e-76 287.7 212 65.1
FAN20G2680 Fragaria x ananassa HOM05D006697 ORTHO05D008161 1.2e-74 283.9 205 66.8
Prupe.8G007100 Prunus persica HOM05D006697 ORTHO05D008161 3.4e-74 282.3 241 59.8
Nitab4.5_0010319g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 5.8e-74 281.6 236 61.4
A06p08910 Brassica napus HOM05D000776 ORTHO05D008161 1.3e-73 280.4 235 57.4
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 2.9e-73 279.3 235 57.4
CAN.G27.3 Capsicum annuum HOM05D006697 ORTHO05D008161 1.4e-72 276.9 197 67.5
Glyma.12G014500 Glycine max HOM05D006697 ORTHO05D008161 9.3e-72 274.2 195 66.7
DCAR_016528 Daucus carota HOM05D006697 ORTHO05D008161 2.1e-71 273.1 193 67.4
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 2.5e-69 266.2 226 61.1
BcaC05g25157 Brassica carinata HOM05D000776 ORTHO05D008161 4.3e-69 265.4 226 57.5
C05p10520 Brassica napus HOM05D000776 ORTHO05D008161 4.3e-69 265.4 226 57.5
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.6e-68 263.5 226 61.1
MD05G1003900 Malus domestica HOM05D006697 ORTHO05D008161 1.1e-67 260.8 193 62.2
Rhsim08G0116200 Rhododendron simsii HOM05D006697 ORTHO05D008161 1.1e-67 260.8 263 52.1
BolC5t29798H Brassica oleracea HOM05D000776 ORTHO05D008161 1.8e-67 260.0 230 56.5
BcaC05g25114 Brassica carinata HOM05D006697 ORTHO05D008161 4.1e-67 258.8 227 57.3
ATR0083G058 Amborella trichopoda HOM05D006697 ORTHO05D008161 4.2e-64 248.8 183 64.5
SHI16724 Sapria himalayana HOM05D006697 ORTHO05D008161 3.3e-61 239.2 284 47.2
Eucgr.F04072 Eucalyptus grandis HOM05D006697 ORTHO05D008161 1.1e-56 224.2 159 67.3
Lsat_1_v5_gn_1_24901 Lactuca sativa HOM05D006697 ORTHO05D008161 7.2e-56 221.5 164 62.8
Gohir.A05G328400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 2.1e-55 219.9 160 65.6
MSTRG.1598 Avicennia marina HOM05D006697 ORTHO05D008161 4.7e-55 218.8 119 89.9
Lalb_Chr01g0000751 Lupinus albus HOM05D006697 ORTHO05D008161 1.1e-53 214.2 147 65.3
arahy.Tifrunner.gnm1.ann1.3DZ399 Arachis hypogaea HOM05D006697 ORTHO05D008161 8.2e-52 208.0 240 48.8
arahy.Tifrunner.gnm1.ann1.9U8FPX Arachis hypogaea HOM05D006697 ORTHO05D008161 1.1e-51 207.6 216 53.2
MELO3C029791.2 Cucumis melo HOM05D006697 ORTHO05D008161 4.5e-50 202.2 165 61.2
unitig_32.g11211 Utricularia gibba HOM05D006697 ORTHO05D008161 2.9e-49 199.5 122 77.9
unitig_32.g11220 Utricularia gibba HOM05D000486 ORTHO05D000375 4.2e-48 195.7 170 61.2
arahy.Tifrunner.gnm1.ann1.K2UT7U Arachis hypogaea HOM05D006697 ORTHO05D008161 8.5e-41 171.4 121 66.9
SMO119G0513 Selaginella moellendorffii HOM05D006697 ORTHO05D008161 2.6e-37 159.8 217 40.6
arahy.Tifrunner.gnm1.ann1.GZG3VH Arachis hypogaea HOM05D006697 ORTHO05D008161 4.8e-36 155.6 150 54.7
AL1G24230 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 4.5e-34 149.1 130 56.2
Mapoly0068s0032 Marchantia polymorpha HOM05D006697 ORTHO05D008161 1.5e-32 144.1 219 36.1
RcHm_v2.0_Chr6g0275321 Rosa chinensis HOM05D006697 ORTHO05D008161 1.8e-22 110.5 106 49.1
Lalb_Chr01g0000761 Lupinus albus HOM05D006697 ORTHO05D008161 3.0e-22 109.8 77 66.2
arahy.Tifrunner.gnm1.ann1.D8HQTE Arachis hypogaea HOM05D006697 ORTHO05D008161 5.2e-14 82.4 65 60.0
Lj7A241T18 Lonicera japonica HOM05D006697 ORTHO05D008161 3.2e-11 73.2 43 76.7
Medtr2g451120 Medicago truncatula HOM05D006697 ORTHO05D008161 9.2e-11 71.6 90 42.2
FAN20G1527 Fragaria x ananassa HOM05D006697 ORTHO05D205377 6.8e-06 55.5 76 40.8


User provided reference genes

Program Settings