Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold247G44863 Striga asiatica HOM05D003777 ORTHO05D004690 0.0e+00 1263.8 689 100.0
Oeu015952.1 Olea europaea HOM05D003777 ORTHO05D004690 4.6e-273 944.5 689 75.3
MSTRG.12471 Avicennia marina HOM05D003777 ORTHO05D004690 7.3e-271 937.2 657 77.8
Nitab4.5_0002026g0090 Nicotiana tabacum HOM05D003777 ORTHO05D004690 3.7e-267 924.9 692 74.1
Nitab4.5_0000492g0120 Nicotiana tabacum HOM05D003777 ORTHO05D004690 9.2e-266 920.2 692 73.7
Solyc11g062270.2 Solanum lycopersicum HOM05D003777 ORTHO05D004690 6.0e-265 917.5 681 73.7
Sopen11g024250 Solanum pennellii HOM05D003777 ORTHO05D004690 3.1e-261 905.2 681 72.8
Migut.D00587 Erythranthe guttata HOM05D003777 ORTHO05D004690 8.9e-261 903.7 632 79.0
CAN.G487.1 Capsicum annuum HOM05D003777 ORTHO05D004690 2.3e-253 879.0 692 71.7
Dinv18168 Davidia involucrata HOM05D003777 ORTHO05D004690 3.7e-251 871.7 704 70.2
CSS0004768 Camellia sinensis var. sinensis HOM05D003777 ORTHO05D004690 9.2e-250 867.1 682 71.0
Peaxi162Scf00029g02527 Petunia axillaris HOM05D003777 ORTHO05D004690 1.5e-247 859.8 692 70.4
vmacro01091 Vaccinium macrocarpon HOM05D003777 ORTHO05D004690 7.6e-244 847.4 708 67.9
Actinidia08096 Actinidia chinensis HOM05D003777 ORTHO05D004690 1.4e-242 843.2 675 69.6
unitig_744.g24046 Utricularia gibba HOM05D003777 ORTHO05D004690 1.7e-240 836.3 698 67.9
Lsat_1_v5_gn_2_96961 Lactuca sativa HOM05D003777 ORTHO05D004690 3.0e-240 835.5 692 68.2
CiPaw.05G173500 Carya illinoinensis HOM05D003777 ORTHO05D004690 1.1e-239 833.6 673 69.4
QL03p055332 Quercus lobata HOM05D003777 ORTHO05D004690 3.6e-238 828.6 633 72.0
Dinv11003 Davidia involucrata HOM05D003777 ORTHO05D004690 4.0e-237 825.1 694 66.7
TAR374G1267 Trochodendron aralioides HOM05D003777 ORTHO05D004690 4.4e-236 821.6 669 68.2
TAR374G0928 Trochodendron aralioides HOM05D003777 ORTHO05D004690 2.9e-235 818.9 669 68.0
CANSAT01G1767 Cannabis sativa HOM05D003777 ORTHO05D004690 4.9e-235 818.1 661 68.2
ECA233G1683 Erigeron canadensis HOM05D003777 ORTHO05D004690 3.2e-234 815.5 663 69.1
Sed0005823 Sechium edule HOM05D003777 ORTHO05D004690 2.1e-233 812.8 664 67.5
Hma1.2p1_0079F.1_g041650 Hydrangea macrophylla HOM05D003777 ORTHO05D004690 7.9e-233 810.8 691 66.4
DCAR_021624 Daucus carota HOM05D003777 ORTHO05D004690 6.6e-232 807.7 690 65.1
GSVIVG01010320001 Vitis vinifera HOM05D003777 ORTHO05D004690 1.5e-231 806.6 684 65.5
Rhsim12G0035800 Rhododendron simsii HOM05D003777 ORTHO05D004690 3.3e-231 805.4 778 61.7
Potri.006G216400 Populus trichocarpa HOM05D003777 ORTHO05D004690 5.6e-231 804.7 697 66.9
Sabra06G0166800 Salix brachista HOM05D003777 ORTHO05D004690 3.6e-230 802.0 652 68.1
TWI36G1566 Tripterygium wilfordii HOM05D003777 ORTHO05D004690 4.8e-230 801.6 663 67.7
TWI75G0300 Tripterygium wilfordii HOM05D003777 ORTHO05D004690 2.4e-229 799.3 663 67.7
Thecc.02G272700 Theobroma cacao HOM05D003777 ORTHO05D004690 3.1e-229 798.9 703 65.1
ClCG05G026250 Citrullus lanatus HOM05D003777 ORTHO05D004690 7.6e-228 794.3 702 64.8
CsaV3_5G030580 Cucumis sativus L. HOM05D003777 ORTHO05D004690 6.4e-227 791.2 700 64.0
Manes.12G016400 Manihot esculenta HOM05D003777 ORTHO05D004690 2.4e-226 789.3 665 66.5
MELO3C011898.2 Cucumis melo HOM05D003777 ORTHO05D004690 5.5e-226 788.1 667 65.5
HanXRQChr04g0126141 Helianthus annuus HOM05D003777 ORTHO05D004690 5.5e-226 788.1 659 67.2
Nitab4.5_0002757g0020 Nicotiana tabacum HOM05D003777 ORTHO05D004690 9.3e-226 787.3 672 67.0
Phvul.002G176900 Phaseolus vulgaris HOM05D003777 ORTHO05D004690 1.0e-224 783.9 699 65.2
Glyma.05G144700 Glycine max HOM05D003777 ORTHO05D004690 8.7e-224 780.8 653 67.1
PSO170G4787 Papaver somniferum HOM05D003777 ORTHO05D004690 1.1e-223 780.4 701 64.5
PSO063G1619 Papaver somniferum HOM05D003777 ORTHO05D004690 9.6e-223 777.3 653 66.5
DCAR_021625 Daucus carota HOM05D003777 ORTHO05D004690 1.3e-222 776.9 691 64.1
Aqoxy5G03557 Aquilegia oxysepala HOM05D003777 ORTHO05D004690 2.8e-222 775.8 710 63.9
BcaB03g15177 Brassica carinata HOM05D003777 ORTHO05D004690 1.4e-221 773.5 692 63.6
BcaC08g46176 Brassica carinata HOM05D003777 ORTHO05D004690 2.6e-220 769.2 693 63.1
C06p42580 Brassica napus HOM05D003777 ORTHO05D004690 2.6e-220 769.2 693 63.1
BolC6t39181H Brassica oleracea HOM05D003777 ORTHO05D004690 2.6e-220 769.2 693 63.1
Sp5g22670 Schrenkiella parvula HOM05D003777 ORTHO05D004690 3.4e-220 768.8 691 63.0
Aa31LG4G12090 Aethionema arabicum HOM05D003777 ORTHO05D004690 5.8e-220 768.1 692 64.2
arahy.Tifrunner.gnm1.ann1.SED4J7 Arachis hypogaea HOM05D003777 ORTHO05D004690 7.6e-220 767.7 708 62.4
Cfa009302 Carpinus fangiana HOM05D003777 ORTHO05D004690 7.6e-220 767.7 703 64.0
Hund25014 Selenicereus undatus HOM05D003777 ORTHO05D004690 2.9e-219 765.8 687 63.8
THA.LOC104825526 Tarenaya hassleriana HOM05D003777 ORTHO05D004690 2.9e-219 765.8 699 63.7
Manes.13G014300 Manihot esculenta HOM05D003777 ORTHO05D004690 2.5e-218 762.7 663 65.9
Gohir.D05G312600 Gossypium hirsutum HOM05D003777 ORTHO05D004690 5.5e-218 761.5 702 63.4
Duzib248G0478 Durio zibethinus HOM05D003777 ORTHO05D004690 2.1e-217 759.6 689 63.3
A07p32470 Brassica napus HOM05D003777 ORTHO05D004690 4.6e-217 758.4 691 62.8
Gohir.A05G311500 Gossypium hirsutum HOM05D003777 ORTHO05D004690 1.3e-216 756.9 703 63.3
Lj4g0007172 Lotus japonicus HOM05D003777 ORTHO05D004690 3.0e-216 755.7 699 64.2
Psat7g080080 Pisum sativum HOM05D003777 ORTHO05D004690 6.7e-216 754.6 704 62.2
Gorai.009G334100 Gossypium raimondii HOM05D003777 ORTHO05D004690 1.1e-215 753.8 701 63.2
Glyma.08G101100 Glycine max HOM05D003777 ORTHO05D004690 4.3e-215 751.9 653 65.5
Cpa.g.sc86.2 Carica papaya HOM05D003777 ORTHO05D004690 1.3e-214 750.4 686 64.1
CARHR060270 Cardamine hirsuta HOM05D003777 ORTHO05D004690 2.1e-214 749.6 669 64.0
Thhalv10018246m.g Eutrema salsugineum HOM05D003777 ORTHO05D004690 6.3e-214 748.0 694 62.1
AL2G26380 Arabidopsis lyrata HOM05D003777 ORTHO05D004690 8.2e-214 747.7 692 62.4
Ca_18071_v3 Cicer arietinum L. HOM05D003777 ORTHO05D004690 8.2e-214 747.7 698 63.0
Duzib268G0959 Durio zibethinus HOM05D003777 ORTHO05D004690 1.1e-213 747.3 703 62.2
Medtr8g079990 Medicago truncatula HOM05D003777 ORTHO05D004690 1.2e-212 743.8 669 63.5
A07p34190 Brassica napus HOM05D003777 ORTHO05D004690 2.6e-212 742.7 693 61.6
AT1G67680 Arabidopsis thaliana HOM05D003777 ORTHO05D004690 7.6e-212 741.1 693 62.2
Atru.chr11.2223 Acer truncatum HOM05D003777 ORTHO05D004690 2.9e-211 739.2 681 61.5
Actinidia30683 Actinidia chinensis HOM05D003777 ORTHO05D004690 8.5e-211 737.6 693 63.2
arahy.Tifrunner.gnm1.ann1.35MH8V Arachis hypogaea HOM05D003777 ORTHO05D004690 1.1e-210 737.3 699 61.5
AUR62017151 Chenopodium quinoa HOM05D003777 ORTHO05D004690 1.2e-209 733.8 705 59.9
MD13G1110100 Malus domestica HOM05D003777 ORTHO05D004690 2.1e-209 733.0 700 61.6
Carub.0002s1406 Capsella rubella HOM05D003777 ORTHO05D004690 2.7e-209 732.6 697 61.1
PGR102G0273 Punica granatum HOM05D003777 ORTHO05D004690 3.6e-209 732.3 700 62.3
MD16G1110000 Malus domestica HOM05D003777 ORTHO05D004690 4.6e-209 731.9 700 61.7
arahy.Tifrunner.gnm1.ann1.9WV3XJ Arachis hypogaea HOM05D003777 ORTHO05D004690 1.0e-208 730.7 696 60.6
arahy.Tifrunner.gnm1.ann1.238UV6 Arachis hypogaea HOM05D003777 ORTHO05D004690 1.8e-208 729.9 696 60.8
VMungo0251G0828 Vigna mungo HOM05D003777 ORTHO05D004690 3.0e-208 729.2 732 60.4
Ah.10g034950 Amaranthus hybridus HOM05D003777 ORTHO05D004690 8.7e-208 727.6 702 60.3
CSS0018349 Camellia sinensis var. sinensis HOM05D003777 ORTHO05D004690 3.3e-207 725.7 539 71.2
TPR.G17105 Trifolium pratense HOM05D003777 ORTHO05D004690 7.4e-207 724.5 698 61.3
Eucgr.B03455 Eucalyptus grandis HOM05D003777 ORTHO05D004690 2.8e-206 722.6 702 61.1
AUR62035656 Chenopodium quinoa HOM05D003777 ORTHO05D004690 6.3e-206 721.5 704 58.5
EL10Ac9g22111 Beta vulgaris HOM05D003777 ORTHO05D004690 9.0e-205 717.6 704 59.8
FvH4_4g24580 Fragaria vesca HOM05D003777 ORTHO05D004690 7.7e-204 714.5 697 60.1
Lalb_Chr07g0187251 Lupinus albus HOM05D003777 ORTHO05D004690 7.7e-204 714.5 696 61.5
RcHm_v2.0_Chr4g0431561 Rosa chinensis HOM05D003777 ORTHO05D004690 7.7e-204 714.5 696 60.6
FAN12G3799 Fragaria x ananassa HOM05D003777 ORTHO05D004690 1.3e-203 713.8 697 60.1
RcHm_v2.0_Chr4g0431581 Rosa chinensis HOM05D003777 ORTHO05D004690 2.2e-203 713.0 696 60.5
FAN07G0030 Fragaria x ananassa HOM05D003777 ORTHO05D004690 2.5e-202 709.5 697 59.8
FAN17G2971 Fragaria x ananassa HOM05D003777 ORTHO05D004690 4.6e-201 705.3 677 60.6
FAN22G1648 Fragaria x ananassa HOM05D003777 ORTHO05D004690 5.1e-200 701.8 697 59.8
Prupe.1G234800 Prunus persica HOM05D003777 ORTHO05D004690 2.0e-199 699.9 574 69.9
Nitab4.5_0001925g0190 Nicotiana tabacum HOM05D003777 ORTHO05D004690 3.7e-198 695.7 646 63.0
AT1G67650 Arabidopsis thaliana HOM05D003777 ORTHO05D004690 7.7e-196 688.0 692 57.8
MBI11_g31858_MAGBIO Magnolia biondii HOM05D003777 ORTHO05D004690 6.5e-195 684.9 713 58.6
CDE07G0923 Ceratophyllum demersum HOM05D003777 ORTHO05D004690 1.9e-194 683.3 699 57.7
TPR.G27143 Trifolium pratense HOM05D003777 ORTHO05D004690 5.5e-194 681.8 578 63.7
PGSC0003DMG400032494 Solanum tuberosum HOM05D003777 ORTHO05D004690 1.2e-193 680.6 507 71.6
Ciclev10030955m.g Citrus clementina HOM05D003777 ORTHO05D004690 3.0e-192 676.0 664 60.4
Sed0021346 Sechium edule HOM05D003777 ORTHO05D004690 2.8e-190 669.5 555 68.8
COL.COLO4_23602 Corchorus olitorius HOM05D003777 ORTHO05D004690 3.7e-190 669.1 696 57.0
HPP92_012793 Vanilla planifolia HOM05D003777 ORTHO05D004690 4.8e-190 668.7 702 56.8
BraA07t31048Z Brassica rapa HOM05D003777 ORTHO05D004690 6.5e-187 658.3 590 60.7
Os01g0889000 Oryza sativa ssp. japonica HOM05D003777 ORTHO05D004690 4.0e-184 649.0 661 56.7
Sc04g0009890 Simmondsia chinensis HOM05D003777 ORTHO05D004690 9.7e-183 644.4 513 69.8
BcaB03g15368 Brassica carinata HOM05D003777 ORTHO05D004690 2.9e-179 632.9 693 56.3
Lj2C633G4 Lonicera japonica HOM05D003777 ORTHO05D004690 4.2e-178 629.0 507 68.0
ATR0824G106 Amborella trichopoda HOM05D003777 ORTHO05D004690 7.2e-178 628.2 699 54.2
Carub.0002s1402 Capsella rubella HOM05D003777 ORTHO05D004690 4.2e-170 602.4 540 63.7
AL2G26340 Arabidopsis lyrata HOM05D003777 ORTHO05D004690 9.2e-157 558.1 702 50.6
BolC2t08468H Brassica oleracea HOM05D003777 ORTHO05D004690 1.3e-150 537.7 678 49.7
Mapoly0007s0138 Marchantia polymorpha HOM05D003777 ORTHO05D004690 2.0e-148 530.4 653 47.2
SEGI_14731 Sequoiadendron giganteum HOM05D003777 ORTHO05D004690 2.0e-148 530.4 552 54.7
CSS0034811 Camellia sinensis var. sinensis HOM05D003777 ORTHO05D004690 4.6e-148 529.3 448 69.6
Lalb_Chr12g0206451 Lupinus albus HOM05D003777 ORTHO05D004690 1.0e-139 501.5 459 65.1
C06p38540 Brassica napus HOM05D003777 ORTHO05D004690 5.1e-139 499.2 481 58.2
Zm00001eb145240 Zea mays HOM05D003777 ORTHO05D004690 4.3e-138 496.1 492 58.1
SHI17928 Sapria himalayana HOM05D003777 ORTHO05D004690 1.1e-136 491.5 666 48.0
Lalb_Chr12g0206431 Lupinus albus HOM05D003777 ORTHO05D004690 1.4e-136 491.1 452 65.0
Pp3c19_7700 Physcomitrium patens HOM05D003777 ORTHO05D004690 4.0e-136 489.6 671 44.4
BolC6t38947H Brassica oleracea HOM05D003777 ORTHO05D004690 6.4e-118 429.1 439 55.8
CBR_g26341 Chara braunii HOM05D003777 ORTHO05D004690 1.4e-112 411.4 587 45.5
Lalb_Chr12g0206401 Lupinus albus HOM05D003777 ORTHO05D004690 1.7e-110 404.4 353 62.6
SMO356G0370 Selaginella moellendorffii HOM05D003777 ORTHO05D004690 6.4e-110 402.5 661 40.8
C02p23330 Brassica napus HOM05D003777 ORTHO05D004690 1.3e-107 394.8 451 51.2
TAR622G1358 Trochodendron aralioides HOM05D003777 ORTHO05D004690 2.8e-105 387.1 337 69.1
Oeu007469.1 Olea europaea HOM05D003777 ORTHO05D004690 9.7e-82 308.9 325 58.8
AUR62017138 Chenopodium quinoa HOM05D003777 ORTHO05D004690 9.1e-80 302.4 348 52.3
CSS0039153 Camellia sinensis var. sinensis HOM05D003777 ORTHO05D004690 5.0e-70 270.0 225 65.3
ECA238G3243 Erigeron canadensis HOM05D003777 ORTHO05D004690 9.4e-69 265.8 224 62.9
PGSC0003DMG400024128 Solanum tuberosum HOM05D003777 ORTHO05D004690 2.4e-64 251.1 188 70.7
MCO13G157 Micromonas commoda HOM05D003777 ORTHO05D004690 7.0e-64 249.6 713 33.0
PGSC0003DMG400017991 Solanum tuberosum HOM05D003777 ORTHO05D004690 5.0e-62 243.4 173 75.1
Hma1.2p1_0075F.1_g039220 Hydrangea macrophylla HOM05D003777 ORTHO05D004690 3.2e-61 240.7 240 58.3
BraA07t30871Z Brassica rapa HOM05D003777 ORTHO05D004690 1.4e-59 235.3 237 53.6
Cre03.g182500 Chlamydomonas reinhardtii HOM05D003777 ORTHO05D004690 2.2e-57 228.0 778 31.4
Solyc10g044443.1 Solanum lycopersicum HOM05D003777 ORTHO05D004690 1.0e-54 219.2 205 59.5
TAR622G0547 Trochodendron aralioides HOM05D003777 ORTHO05D004690 1.3e-54 218.8 196 60.7
PGSC0003DMG400024126 Solanum tuberosum HOM05D003777 ORTHO05D004690 8.6e-54 216.1 160 76.2
Nn4g21997 Nelumbo nucifera HOM05D003777 ORTHO05D004690 2.8e-52 211.1 179 70.9
Sopen01g018830 Solanum pennellii HOM05D003777 ORTHO05D004690 1.0e-51 209.1 205 57.6
Psat3g102200 Pisum sativum HOM05D003777 ORTHO05D004690 1.2e-50 205.7 155 68.4
Psat5g044680 Pisum sativum HOM05D003777 ORTHO05D004690 1.3e-49 202.2 155 68.4
PRCOL_00006597 Prasinoderma coloniale HOM05D003777 ORTHO05D004690 9.2e-48 196.1 632 31.0
Sopen01g018820 Solanum pennellii HOM05D003777 ORTHO05D004690 5.0e-46 190.3 172 62.8
Aqoxy6G02118 Aquilegia oxysepala HOM05D003777 ORTHO05D004690 1.0e-43 182.6 128 75.0
Haze_17766 Corylus avellana HOM05D001576 ORTHO05D000401 6.8e-43 179.9 117 76.9
CAN.G1295.1 Capsicum annuum HOM05D003777 ORTHO05D004690 3.1e-35 154.5 176 53.4
Aqoxy6G02120 Aquilegia oxysepala HOM05D003777 ORTHO05D004690 8.3e-33 146.4 136 62.5
Lalb_Chr12g0206411 Lupinus albus HOM05D003777 ORTHO05D004690 2.3e-30 138.3 92 75.0
Lalb_Chr12g0206441 Lupinus albus HOM05D003777 ORTHO05D004690 2.3e-30 138.3 92 75.0
Lalb_Chr12g0206461 Lupinus albus HOM05D003777 ORTHO05D004690 2.3e-30 138.3 92 75.0
CAN.G1310.4 Capsicum annuum HOM05D003777 ORTHO05D004690 3.3e-29 134.4 92 75.0
Psat3g103880 Pisum sativum HOM05D003777 ORTHO05D004690 7.3e-29 133.3 181 45.3
Aqoxy6G02119 Aquilegia oxysepala HOM05D003777 ORTHO05D004690 1.9e-24 118.6 100 64.0
MBI11_g11081_MAGBIO Magnolia biondii HOM05D003777 ORTHO05D004690 3.9e-22 110.9 96 63.5
MBI11_g45427_MAGBIO Magnolia biondii HOM05D003777 ORTHO05D004690 5.1e-22 110.5 96 62.5
Lalb_Chr12g0206421 Lupinus albus HOM05D003777 ORTHO05D004690 5.6e-21 107.1 140 49.3
TAR636G3069 Trochodendron aralioides HOM05D003847 ORTHO05D004976 5.6e-21 107.1 99 55.6
TAR622G0255 Trochodendron aralioides HOM05D003777 ORTHO05D004690 3.6e-20 104.4 94 60.6
Solyc01g047580.1 Solanum lycopersicum HOM05D003777 ORTHO05D004690 4.4e-18 97.4 119 51.3
C06p38550 Brassica napus HOM05D003777 ORTHO05D004690 7.6e-18 96.7 92 64.1
PGSC0003DMG400024133 Solanum tuberosum HOM05D003777 ORTHO05D004690 4.6e-15 87.4 58 75.9
SHI17930 Sapria himalayana HOM05D003777 ORTHO05D012379 7.8e-15 86.7 95 52.6
BcaC03g14865 Brassica carinata HOM05D003777 ORTHO05D004690 1.7e-14 85.5 105 54.3
Nitab4.5_0004629g0100 Nicotiana tabacum HOM05D003777 ORTHO05D004690 1.7e-14 85.5 55 74.5
SEGI_18986 Sequoiadendron giganteum HOM05D003777 ORTHO05D000001 1.1e-13 82.8 112 39.3
BcaC03g14858 Brassica carinata HOM05D003777 ORTHO05D004690 3.3e-13 81.3 81 60.5
Psat4g130680 Pisum sativum HOM05D003777 ORTHO05D037365 3.1e-11 74.7 113 39.8
CAN.G151.20 Capsicum annuum HOM05D000329 ORTHO05D000833 4.9e-09 67.4 48 72.9
Cfa022335 Carpinus fangiana HOM05D003777 ORTHO05D004690 4.9e-09 67.4 667 23.8
Actinidia09282 Actinidia chinensis HOM05D003777 ORTHO05D004690 5.4e-08 63.9 157 40.1
Hma1.2p1_0214F.1_g090690 Hydrangea macrophylla HOM05D003777 ORTHO05D012379 1.6e-07 62.4 96 43.8
Nitab4.5_0004750g0060 Nicotiana tabacum HOM05D003777 ORTHO05D012379 6.0e-07 60.5 182 31.9
TAR625G1055 Trochodendron aralioides HOM05D003777 ORTHO05D012379 1.0e-06 59.7 49 63.3
MBI11_g46771_MAGBIO Magnolia biondii HOM05D003777 ORTHO05D012379 8.7e-06 56.6 48 64.6


User provided reference genes

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