Gene: AT1G67680

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G67680
  • Transcript Identifier AT1G67680.1
  • Gene Type Coding gene
  • Location Chr1 : 25365962-25368464 : negative

Gene Family Information

  • ID HOM05D003777
  • #Genes/#Species 183/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G67680.1
  • uniprot Q9FXD4

Descriptions

  • Description SRP72 RNA-binding domain-containing protein
  • Computational description SRP72 RNA-binding domain; FUNCTIONS IN: 7S RNA binding; INVOLVED IN: SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Signal recognition particle, SRP72 subunit, RNA-binding (InterPro:IPR013699); BEST Arabidopsis thaliana protein match is: SRP72 RNA-binding domain (TAIR:AT1G67650.1); Has 655 Blast hits to 637 proteins in 232 species: Archae - 21; Bacteria - 65; Metazoa - 237; Fungi - 154; Plants - 42; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006614
IEA
GOA DatabaseSRP-dependent cotranslational protein targeting to membrane
GO:0006614
IBA
Gene OntologySRP-dependent cotranslational protein targeting to membrane1
GO:0006614
IEA
InterProSRP-dependent cotranslational protein targeting to membrane

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008312
IEA
GOA Database7S RNA binding
GO:0008312
IBA
Gene Ontology7S RNA binding1
GO:0008312
IEA
InterPro7S RNA binding
GO:0043022
IBA
Gene Ontologyribosome binding1
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005829
RCA
Gene Ontologycytosol2
GO:0005786
IEA
GOA Databasesignal recognition particle, endoplasmic reticulum targeting
GO:0005786
IBA
Gene Ontologysignal recognition particle, endoplasmic reticulum targeting1
GO:0048500
IEA
GOA Databasesignal recognition particle
GO:0048500
IEA
InterProsignal recognition particle
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G67650

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013699 Signal recognition particle, SRP72 subunit, RNA-binding
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR031545 Putative TPR-like repeat
IPR026270 Signal recognition particle, SRP72 subunit
Mapman id Description
23.3.1.1.2 Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.component SRP72