Gene: AT1G67650
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G67650
- Transcript Identifier AT1G67650.1
- Gene Type Coding gene
- Location Chr1 : 25359832-25362395 : negative
Gene Family Information
- ID HOM05D003777
- #Genes/#Species 183/96
- Phylogenetic origin
- ID ORTHO05D004690
- #Genes/#Species 173/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT1G67650.1
- uniprot Q9FXD1
Descriptions
- Description SRP72 RNA-binding domain-containing protein
- Computational description SRP72 RNA-binding domain; FUNCTIONS IN: 7S RNA binding; INVOLVED IN: SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle; CONTAINS InterPro DOMAIN/s: Signal recognition particle, SRP72 subunit, RNA-binding (InterPro:IPR013699); BEST Arabidopsis thaliana protein match is: SRP72 RNA-binding domain (TAIR:AT1G67680.1); Has 433 Blast hits to 428 proteins in 197 species: Archae - 4; Bacteria - 29; Metazoa - 154; Fungi - 136; Plants - 31; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006614 | IEA | GOA Database | SRP-dependent cotranslational protein targeting to membrane | |
| GO:0006614 | IBA | Gene Ontology | SRP-dependent cotranslational protein targeting to membrane | 1 |
| GO:0006614 | IEA | InterPro | SRP-dependent cotranslational protein targeting to membrane |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008312 | IEA | GOA Database | 7S RNA binding | |
| GO:0008312 | IBA | Gene Ontology | 7S RNA binding | 1 |
| GO:0008312 | IEA | InterPro | 7S RNA binding | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0043022 | IBA | Gene Ontology | ribosome binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | IDA | GOA Database | plasmodesma | |
| GO:0009506 | HDA | Gene Ontology | plasmodesma | 2 |
| GO:0048500 | IEA | GOA Database | signal recognition particle | |
| GO:0048500 | IEA | InterPro | signal recognition particle | |
| GO:0005786 | IEA | GOA Database | signal recognition particle, endoplasmic reticulum targeting | |
| GO:0005786 | IBA | Gene Ontology | signal recognition particle, endoplasmic reticulum targeting | 1 |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | ISM | Gene Ontology | cytoplasm | |
| GO:0005829 | IDA | GOA Database | cytosol |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 23.3.1.1.2 | Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.component SRP72 |