Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold245G44435 Striga asiatica HOM05D001987 ORTHO05D006514 0.0e+00 1266.9 640 100.0
Solyc00g500100.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.2e-17 95.9 139 45.3
Solyc00g500117.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.2e-17 95.9 139 45.3
Solyc00g500274.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.2e-17 95.9 139 45.3
Solyc00g500309.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 5.9e-17 93.6 139 44.6
Peaxi162Scf01098g00013 Petunia axillaris HOM05D001987 ORTHO05D006514 6.6e-16 90.1 111 49.5
LjContig00315g0000313 Lotus japonicus HOM05D001987 ORTHO05D006514 1.1e-15 89.4 139 43.2
Lsat_1_v5_gn_0_38040 Lactuca sativa HOM05D001987 ORTHO05D006514 1.9e-15 88.6 139 43.9
arahy.Tifrunner.gnm1.ann1.D5EGR1 Arachis hypogaea HOM05D001987 ORTHO05D006514 2.8e-14 84.7 117 46.2
Lsat_1_v5_gn_8_132861 Lactuca sativa HOM05D001987 ORTHO05D006514 2.8e-14 84.7 139 42.4
Peaxi162Scf00360g00815 Petunia axillaris HOM05D001987 ORTHO05D006514 2.8e-14 84.7 96 54.2
TAR358G0001 Trochodendron aralioides HOM05D001987 ORTHO05D006514 3.6e-14 84.3 139 42.4
Solyc12g038985.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.0e-13 82.8 147 43.5
Sc17g0003730 Simmondsia chinensis HOM05D001987 ORTHO05D006514 5.2e-13 80.5 150 39.3
Lj2P1221T93 Lonicera japonica HOM05D001987 ORTHO05D006514 9.8e-12 76.3 38 92.1
Lj2P1230T111 Lonicera japonica HOM05D001987 ORTHO05D006514 9.8e-12 76.3 38 92.1
MBI05_g05348_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 9.8e-12 76.3 139 41.0
A04p09400 Brassica napus HOM05D001987 ORTHO05D006514 2.9e-11 74.7 48 77.1
BolSC28t60371H Brassica oleracea HOM05D001987 ORTHO05D006514 2.9e-11 74.7 48 77.1
CARHR282630 Cardamine hirsuta HOM05D001987 ORTHO05D006514 2.9e-11 74.7 48 77.1
TPR.G26049 Trifolium pratense HOM05D001987 ORTHO05D006514 2.9e-11 74.7 38 92.1
CsaV3_UNG208600 Cucumis sativus L. HOM05D001987 ORTHO05D006514 4.9e-11 73.9 139 38.8
DCAR_032448 Daucus carota HOM05D001987 ORTHO05D006514 4.9e-11 73.9 42 88.1
Eucgr.H02719 Eucalyptus grandis HOM05D001987 ORTHO05D006514 4.9e-11 73.9 40 87.5
ATMG00090 Arabidopsis thaliana HOM05D001987 ORTHO05D006514 1.1e-10 72.8 38 89.5
arahy.Tifrunner.gnm1.ann1.8UR9GU Arachis hypogaea HOM05D001987 ORTHO05D006514 1.4e-10 72.4 38 89.5
arahy.Tifrunner.gnm1.ann1.K88Y93 Arachis hypogaea HOM05D001987 ORTHO05D006514 1.4e-10 72.4 38 89.5
arahy.Tifrunner.gnm1.ann1.TY26DT Arachis hypogaea HOM05D001987 ORTHO05D006514 1.4e-10 72.4 38 89.5
Hma1.2p1_0105F.1_g050680 Hydrangea macrophylla HOM05D001987 ORTHO05D006514 1.9e-10 72.0 37 89.2
Nitab4.5_0014136g0030 Nicotiana tabacum HOM05D009000 ORTHO05D010659 1.9e-10 72.0 77 55.8
CARHR288240 Cardamine hirsuta HOM05D001987 ORTHO05D006514 1.2e-09 69.3 33 97.0
Solyc00g500245.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.6e-09 68.9 141 39.0
CANSAT16G0046 Cannabis sativa HOM05D001987 ORTHO05D006514 2.0e-09 68.6 36 88.9
SalBow1G3504 Salvia bowleyana HOM05D001987 ORTHO05D006514 2.7e-09 68.2 141 39.0
SalBow1G4210 Salvia bowleyana HOM05D001987 ORTHO05D006514 2.7e-09 68.2 141 39.0
Hund30965 Selenicereus undatus HOM05D001987 ORTHO05D006514 2.7e-09 68.2 139 37.4
Hund12658 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.0e-08 66.2 141 36.2
Dinv06676 Davidia involucrata HOM05D001987 ORTHO05D006514 1.3e-08 65.9 141 38.3
Psat7g012480 Pisum sativum HOM05D001987 ORTHO05D006514 1.7e-08 65.5 141 37.6
Ca_30750_v3 Cicer arietinum L. HOM05D001987 ORTHO05D006514 2.3e-08 65.1 141 37.6
PSO541G5803 Papaver somniferum HOM05D001987 ORTHO05D006514 3.0e-08 64.7 38 78.9
PSO675G5335 Papaver somniferum HOM05D001987 ORTHO05D006514 3.0e-08 64.7 38 78.9
Cfa023008 Carpinus fangiana HOM05D001987 ORTHO05D006514 3.9e-08 64.3 141 36.9
Hund28418 Selenicereus undatus HOM05D001987 ORTHO05D006514 6.6e-08 63.5 38 78.9
Hund29734 Selenicereus undatus HOM05D001987 ORTHO05D006514 6.6e-08 63.5 38 78.9
Hund29823 Selenicereus undatus HOM05D001987 ORTHO05D006514 6.6e-08 63.5 38 78.9
Hund30343 Selenicereus undatus HOM05D001987 ORTHO05D006514 6.6e-08 63.5 38 78.9
Hund30419 Selenicereus undatus HOM05D001987 ORTHO05D006514 6.6e-08 63.5 38 78.9
Psat1g091000 Pisum sativum HOM05D001987 ORTHO05D006514 8.6e-08 63.2 113 39.8
Solyc05g045840.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 8.6e-08 63.2 38 81.6
Peaxi162Scf00934g00143 Petunia axillaris HOM05D001987 ORTHO05D006514 1.9e-07 62.0 155 35.5
Solyc09g015860.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 2.5e-07 61.6 134 38.8
unitig_87.g28029 Utricularia gibba HOM05D001987 ORTHO05D006514 7.3e-07 60.1 139 36.7
RhsimMtG0002600 Rhododendron simsii HOM05D001987 ORTHO05D006514 2.1e-06 58.5 67 55.2
SHI01964 Sapria himalayana HOM05D001987 ORTHO05D006514 2.1e-06 58.5 36 75.0
Ah.10g028690 Amaranthus hybridus HOM05D001987 ORTHO05D006514 2.8e-06 58.2 38 73.7
CDE02G0251 Ceratophyllum demersum HOM05D001987 ORTHO05D006514 2.8e-06 58.2 139 37.4


User provided reference genes

Program Settings