Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold23G10070 Striga asiatica HOM05D005173 ORTHO05D006214 5.7e-74 280.8 140 100.0
Solyc07g041200.3 Solanum lycopersicum HOM05D005173 ORTHO05D006214 8.4e-33 144.1 118 63.6
Sopen07g020470 Solanum pennellii HOM05D005173 ORTHO05D006214 8.4e-33 144.1 118 63.6
PGSC0003DMG400020952 Solanum tuberosum HOM05D005173 ORTHO05D006214 8.4e-33 144.1 118 63.6
Peaxi162Scf00246g00045 Petunia axillaris HOM05D005173 ORTHO05D006214 1.4e-32 143.3 137 57.7
Nitab4.5_0001488g0160 Nicotiana tabacum HOM05D005173 ORTHO05D006214 2.4e-32 142.5 117 64.1
SGA_v2.0_scaffold21G09462 Striga asiatica HOM05D005173 ORTHO05D006214 2.4e-32 142.5 118 63.6
CSS0048515 Camellia sinensis var. sinensis HOM05D005173 ORTHO05D006214 3.2e-32 142.1 118 62.7
Migut.L01541 Erythranthe guttata HOM05D005173 ORTHO05D006214 3.2e-32 142.1 118 62.7
PSO063G3756 Papaver somniferum HOM05D005173 ORTHO05D006214 3.2e-32 142.1 118 62.7
PGR142G0948 Punica granatum HOM05D005173 ORTHO05D006214 3.2e-32 142.1 118 62.7
Potri.006G145200 Populus trichocarpa HOM05D005173 ORTHO05D006214 4.2e-32 141.7 118 62.7
MSTRG.19482 Avicennia marina HOM05D005173 ORTHO05D006214 9.3e-32 140.6 118 61.9
CANSAT56G2861 Cannabis sativa HOM05D005173 ORTHO05D006214 9.3e-32 140.6 118 61.9
Nn8g38732 Nelumbo nucifera HOM05D005173 ORTHO05D006214 9.3e-32 140.6 118 61.9
Nitab4.5_0013150g0020 Nicotiana tabacum HOM05D005173 ORTHO05D006214 9.3e-32 140.6 117 64.1
PSO421G0551 Papaver somniferum HOM05D005173 ORTHO05D006214 9.3e-32 140.6 118 61.9
RcHm_v2.0_Chr2g0094221 Rosa chinensis HOM05D005173 ORTHO05D006214 9.3e-32 140.6 118 62.7
TWI32G0591 Tripterygium wilfordii HOM05D005173 ORTHO05D006214 9.3e-32 140.6 118 62.7
arahy.Tifrunner.gnm1.ann1.6AS4TW Arachis hypogaea HOM05D005173 ORTHO05D006214 1.2e-31 140.2 118 61.9
vmacro17173 Vaccinium macrocarpon HOM05D005173 ORTHO05D006214 1.2e-31 140.2 117 61.5
ClCG03G015280 Citrullus lanatus HOM05D005173 ORTHO05D006214 1.6e-31 139.8 118 61.0
MELO3C015504.2 Cucumis melo HOM05D005173 ORTHO05D006214 1.6e-31 139.8 118 61.0
Potri.018G064800 Populus trichocarpa HOM05D005173 ORTHO05D006214 1.6e-31 139.8 118 61.9
Sed0012764 Sechium edule HOM05D005173 ORTHO05D006214 1.6e-31 139.8 118 61.0
Actinidia25222 Actinidia chinensis HOM05D005173 ORTHO05D006214 2.1e-31 139.4 118 61.0
THA.LOC104799624 Tarenaya hassleriana HOM05D005173 ORTHO05D006214 2.1e-31 139.4 118 61.9
EL10Ac8g19142 Beta vulgaris HOM05D005173 ORTHO05D006214 2.7e-31 139.0 118 61.0
AUR62029004 Chenopodium quinoa HOM05D005173 ORTHO05D006214 2.7e-31 139.0 117 63.2
CsaV3_1G040770 Cucumis sativus L. HOM05D005173 ORTHO05D006214 2.7e-31 139.0 118 61.0
Sabra18G0057400 Salix brachista HOM05D005173 ORTHO05D006214 2.7e-31 139.0 118 61.0
Sed0013811 Sechium edule HOM05D005173 ORTHO05D006214 2.7e-31 139.0 118 61.0
TAR636G1303 Trochodendron aralioides HOM05D005173 ORTHO05D006214 2.7e-31 139.0 118 61.9
arahy.Tifrunner.gnm1.ann1.9Y0BJI Arachis hypogaea HOM05D005173 ORTHO05D006214 3.5e-31 138.7 118 61.0
Carub.0006s1885 Capsella rubella HOM05D005173 ORTHO05D006214 3.5e-31 138.7 118 61.9
CAN.G88.5 Capsicum annuum HOM05D005173 ORTHO05D006214 3.5e-31 138.7 118 62.7
Cc00_g19370 Coffea canephora HOM05D005173 ORTHO05D006214 3.5e-31 138.7 118 61.0
FvH4_1g08150 Fragaria vesca HOM05D005173 ORTHO05D006214 3.5e-31 138.7 118 61.9
FAN19G2713 Fragaria x ananassa HOM05D005173 ORTHO05D006214 3.5e-31 138.7 118 61.9
FAN23G0270 Fragaria x ananassa HOM05D005173 ORTHO05D006214 3.5e-31 138.7 118 61.9
Lj7C682G9 Lonicera japonica HOM05D005173 ORTHO05D006214 3.5e-31 138.7 117 61.5
Ca_21308_v3 Cicer arietinum L. HOM05D005173 ORTHO05D006214 4.6e-31 138.3 118 61.9
Ah.14g085040 Amaranthus hybridus HOM05D005173 ORTHO05D006214 6.0e-31 137.9 117 60.7
AUR62025172 Chenopodium quinoa HOM05D005173 ORTHO05D006214 6.0e-31 137.9 117 62.4
Glyma.17G051500 Glycine max HOM05D005173 ORTHO05D006214 6.0e-31 137.9 118 61.0
QL02p061251 Quercus lobata HOM05D005173 ORTHO05D006214 6.0e-31 137.9 118 60.2
FAN28G2824 Fragaria x ananassa HOM05D005173 ORTHO05D006214 7.9e-31 137.5 118 61.9
Lalb_Chr12g0200011 Lupinus albus HOM05D005173 ORTHO05D006214 7.9e-31 137.5 118 61.0
Glyma.13G107800 Glycine max HOM05D005173 ORTHO05D006214 1.0e-30 137.1 118 61.0
Gohir.A13G192200 Gossypium hirsutum HOM05D005173 ORTHO05D006214 1.0e-30 137.1 118 61.0
Gohir.D13G197600 Gossypium hirsutum HOM05D005173 ORTHO05D006214 1.0e-30 137.1 118 61.0
Gorai.013G226300 Gossypium raimondii HOM05D005173 ORTHO05D006214 1.0e-30 137.1 118 61.0
TWI63G0548 Tripterygium wilfordii HOM05D005173 ORTHO05D006214 1.0e-30 137.1 118 61.0
Actinidia39689 Actinidia chinensis HOM05D005173 ORTHO05D006214 1.3e-30 136.7 118 59.3
COL.COLO4_18139 Corchorus olitorius HOM05D005173 ORTHO05D006214 1.3e-30 136.7 119 60.5
Hma1.2p1_0797F.1_g219350 Hydrangea macrophylla HOM05D005173 ORTHO05D006214 1.3e-30 136.7 118 61.0
Lj4g0027115 Lotus japonicus HOM05D005173 ORTHO05D006214 1.3e-30 136.7 118 60.2
Manes.03G037700 Manihot esculenta HOM05D005173 ORTHO05D006214 1.3e-30 136.7 118 61.0
Phvul.003G133200 Phaseolus vulgaris HOM05D005173 ORTHO05D006214 1.3e-30 136.7 118 61.0
GSVIVG01015121001 Vitis vinifera HOM05D005173 ORTHO05D006214 1.3e-30 136.7 118 61.0
CDE04G2820 Ceratophyllum demersum HOM05D005173 ORTHO05D006214 1.8e-30 136.3 118 57.6
MD15G1213300 Malus domestica HOM05D005173 ORTHO05D006214 1.8e-30 136.3 118 60.2
Sp6g23940 Schrenkiella parvula HOM05D005173 ORTHO05D006214 1.8e-30 136.3 118 60.2
TAR624G0255 Trochodendron aralioides HOM05D005173 ORTHO05D006214 1.8e-30 136.3 118 60.2
CARHR192290 Cardamine hirsuta HOM05D005173 ORTHO05D006214 2.3e-30 136.0 118 61.0
Atru.chr7.1658 Acer truncatum HOM05D005173 ORTHO05D006214 3.0e-30 135.6 118 59.3
Prupe.7G203600 Prunus persica HOM05D005173 ORTHO05D006214 3.0e-30 135.6 118 60.2
Aqoxy7G01101 Aquilegia oxysepala HOM05D005173 ORTHO05D006214 3.9e-30 135.2 118 61.0
Dinv42364 Davidia involucrata HOM05D005173 ORTHO05D006214 3.9e-30 135.2 118 58.5
BcaB05g22835 Brassica carinata HOM05D005173 ORTHO05D006214 5.1e-30 134.8 118 60.2
A02p06290 Brassica napus HOM05D005173 ORTHO05D006214 5.1e-30 134.8 118 60.2
BNapus_Darmor_BZH_scaffold_38p01550 Brassica napus HOM05D005173 ORTHO05D006214 5.1e-30 134.8 118 60.2
BolC2t07046H Brassica oleracea HOM05D005173 ORTHO05D006214 5.1e-30 134.8 118 60.2
BraA02t05577Z Brassica rapa HOM05D005173 ORTHO05D006214 5.1e-30 134.8 118 60.2
Manes.16G098000 Manihot esculenta HOM05D005173 ORTHO05D006214 5.1e-30 134.8 118 59.3
Dinv25585 Davidia involucrata HOM05D005173 ORTHO05D006214 6.7e-30 134.4 118 57.6
Duzib150G1290 Durio zibethinus HOM05D005173 ORTHO05D006214 6.7e-30 134.4 118 58.5
FAN26G1854 Fragaria x ananassa HOM05D005173 ORTHO05D006214 6.7e-30 134.4 118 60.2
FAN26G2726 Fragaria x ananassa HOM05D005173 ORTHO05D006214 6.7e-30 134.4 118 60.2
CiPaw.03G210500 Carya illinoinensis HOM05D005173 ORTHO05D006214 8.7e-30 134.0 118 58.5
Ciclev10008959m.g Citrus clementina HOM05D005173 ORTHO05D006214 8.7e-30 134.0 118 58.5
Eucgr.C00843 Eucalyptus grandis HOM05D005173 ORTHO05D006214 8.7e-30 134.0 118 61.0
Oeu054818.3 Olea europaea HOM05D005173 ORTHO05D006214 8.7e-30 134.0 118 60.2
A10p19490 Brassica napus HOM05D005173 ORTHO05D006214 1.1e-29 133.7 118 59.3
BraA10t44025Z Brassica rapa HOM05D005173 ORTHO05D006214 1.1e-29 133.7 118 59.3
Haze_25966 Corylus avellana HOM05D005173 ORTHO05D006214 1.1e-29 133.7 118 59.3
Thhalv10014184m.g Eutrema salsugineum HOM05D005173 ORTHO05D006214 1.1e-29 133.7 118 58.5
HanXRQChr01g0007561 Helianthus annuus HOM05D005173 ORTHO05D006214 1.1e-29 133.7 118 58.5
Sc18g0002360 Simmondsia chinensis HOM05D005173 ORTHO05D006214 1.1e-29 133.7 118 59.3
Thecc.09G081500 Theobroma cacao HOM05D005173 ORTHO05D006214 1.1e-29 133.7 118 58.5
TPR.G9429 Trifolium pratense HOM05D005173 ORTHO05D006214 1.1e-29 133.7 118 59.3
Duzib168G0179 Durio zibethinus HOM05D005173 ORTHO05D006214 1.5e-29 133.3 117 59.0
Lsat_1_v5_gn_5_142000 Lactuca sativa HOM05D005173 ORTHO05D006214 1.5e-29 133.3 118 59.3
Lalb_Chr07g0181031 Lupinus albus HOM05D005173 ORTHO05D006214 1.9e-29 132.9 118 57.6
MD02G1086100 Malus domestica HOM05D005173 ORTHO05D006214 1.9e-29 132.9 118 58.5
HanXRQChr09g0237971 Helianthus annuus HOM05D005173 ORTHO05D006214 2.5e-29 132.5 118 59.3
BcaB08g36505 Brassica carinata HOM05D005173 ORTHO05D006214 3.3e-29 132.1 118 59.3
BcaC04g19437 Brassica carinata HOM05D005173 ORTHO05D006214 4.3e-29 131.7 118 58.5
C09p55690 Brassica napus HOM05D005173 ORTHO05D006214 4.3e-29 131.7 118 58.5
BolC9t58435H Brassica oleracea HOM05D005173 ORTHO05D006214 4.3e-29 131.7 118 58.5
Cpa.g.sc28.94 Carica papaya HOM05D005173 ORTHO05D006214 4.3e-29 131.7 118 57.6
ATR0598G148 Amborella trichopoda HOM05D005173 ORTHO05D006214 5.6e-29 131.3 118 57.6
AL6G32050 Arabidopsis lyrata HOM05D005173 ORTHO05D006214 5.6e-29 131.3 118 59.3
AT5G20520 Arabidopsis thaliana HOM05D005173 ORTHO05D006214 5.6e-29 131.3 118 59.3
MSTRG.26457 Avicennia marina HOM05D005173 ORTHO05D006214 7.4e-29 131.0 118 57.6
Lsat_1_v5_gn_7_34821 Lactuca sativa HOM05D005173 ORTHO05D006214 7.4e-29 131.0 118 58.5
DCAR_024724 Daucus carota HOM05D005173 ORTHO05D006214 9.6e-29 130.6 118 56.8
Psat4g016960 Pisum sativum HOM05D005173 ORTHO05D006214 9.6e-29 130.6 118 58.5
DCAR_028284 Daucus carota HOM05D005173 ORTHO05D006214 1.3e-28 130.2 124 56.5
Medtr4g125660 Medicago truncatula HOM05D005173 ORTHO05D006214 1.3e-28 130.2 118 58.5
ECA234G3859 Erigeron canadensis HOM05D005173 ORTHO05D006214 1.6e-28 129.8 118 56.8
VMungo1215G2902 Vigna mungo HOM05D005173 ORTHO05D006214 1.6e-28 129.8 118 57.6
BcaB05g22843 Brassica carinata HOM05D005173 ORTHO05D006214 2.8e-28 129.0 118 58.5
MSTRG.10526 Avicennia marina HOM05D005173 ORTHO05D006214 4.8e-28 128.3 118 56.8
Zm00001eb108940 Zea mays HOM05D005173 ORTHO05D006214 8.1e-28 127.5 118 56.8
Rhsim03G0230600 Rhododendron simsii HOM05D005173 ORTHO05D006214 1.1e-27 127.1 117 56.4
unitig_22.g5750 Utricularia gibba HOM05D005173 ORTHO05D006214 2.4e-27 125.9 118 55.9
SalBow1G6961 Salvia bowleyana HOM05D005173 ORTHO05D006214 4.0e-27 125.2 134 52.2
Os07g0608300 Oryza sativa ssp. japonica HOM05D005173 ORTHO05D006214 5.3e-27 124.8 118 56.8
Mapoly0002s0260 Marchantia polymorpha HOM05D005173 ORTHO05D006214 4.5e-26 121.7 118 54.2
Sabra06G0114800 Salix brachista HOM05D005173 ORTHO05D006214 1.7e-25 119.8 106 58.5
SHI33752 Sapria himalayana HOM05D005173 ORTHO05D006214 2.2e-25 119.4 118 53.4
HPP92_006149 Vanilla planifolia HOM05D005173 ORTHO05D006214 2.9e-25 119.0 118 55.1
HPP92_009230 Vanilla planifolia HOM05D005173 ORTHO05D006214 2.9e-25 119.0 117 55.6
SMO203G0271 Selaginella moellendorffii HOM05D005173 ORTHO05D006214 1.4e-24 116.7 118 55.1
Rhsim05G0012900 Rhododendron simsii HOM05D005173 ORTHO05D006214 1.2e-23 113.6 60 86.7
QL02p061362 Quercus lobata HOM05D005173 ORTHO05D006214 1.3e-22 110.2 58 84.5
Aa31LG1G14140 Aethionema arabicum HOM05D005173 ORTHO05D006214 2.3e-22 109.4 58 86.2
CBR_g3819 Chara braunii HOM05D005173 ORTHO05D006214 5.1e-22 108.2 120 50.0
Pp3c15_14310 Physcomitrium patens HOM05D005173 ORTHO05D006214 4.3e-21 105.1 118 50.0
BcaC03g13770 Brassica carinata HOM05D005173 ORTHO05D006214 4.8e-20 101.7 112 52.7
DCAR_031940 Daucus carota HOM05D005173 ORTHO05D006214 1.1e-19 100.5 106 51.9
Hma1.2p1_0440F.1_g153610 Hydrangea macrophylla HOM05D005173 ORTHO05D006214 9.0e-19 97.4 66 68.2
Lsat_1_v5_gn_2_31840 Lactuca sativa HOM05D005173 ORTHO05D006214 7.9e-15 84.3 65 61.5
Lsat_1_v5_gn_5_98841 Lactuca sativa HOM05D005173 ORTHO05D006214 1.6e-12 76.6 60 63.3
Hma1.2p1_0536F.1_g174110 Hydrangea macrophylla HOM05D005096 ORTHO05D006214 2.9e-09 65.9 44 65.9
Cfa026742 Carpinus fangiana HOM05D005173 ORTHO05D006214 5.0e-09 65.1 114 34.2
Cre03.g160100 Chlamydomonas reinhardtii HOM05D005173 ORTHO05D006214 4.2e-08 62.0 76 38.2
SEGI_17932 Sequoiadendron giganteum HOM05D005173 ORTHO05D006214 1.6e-07 60.1 38 71.1


User provided reference genes

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