Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold21G09605 Striga asiatica HOM05D005445 ORTHO05D007043 5.3e-81 304.3 152 100.0
Peaxi162Scf01184g00140 Petunia axillaris HOM05D005445 ORTHO05D007043 8.5e-23 110.9 171 42.7
Duzib170G0675 Durio zibethinus HOM05D005445 ORTHO05D007043 6.8e-20 101.3 170 40.0
MSTRG.26517 Avicennia marina HOM05D005445 ORTHO05D007043 1.3e-18 97.1 91 58.2
Lj5C772G2 Lonicera japonica HOM05D005445 ORTHO05D007043 1.7e-18 96.7 226 35.8
Ah.10g032730 Amaranthus hybridus HOM05D005445 ORTHO05D007043 3.7e-18 95.5 71 64.8
Actinidia07565 Actinidia chinensis HOM05D005445 ORTHO05D007043 1.1e-17 94.0 163 39.3
SGA_v2.0_scaffold485G52365 Striga asiatica HOM05D005445 ORTHO05D007043 1.8e-17 93.2 217 36.4
MELO3C003927.2 Cucumis melo HOM05D005445 ORTHO05D007043 2.4e-17 92.8 201 34.3
CsaV3_2G009110 Cucumis sativus L. HOM05D005445 ORTHO05D007043 3.1e-17 92.4 202 34.2
Hma1.2p1_0314F.1_g122070 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 3.1e-17 92.4 215 34.4
MBI13_g31572_MAGBIO Magnolia biondii HOM05D005445 ORTHO05D007043 3.1e-17 92.4 96 52.1
ClCG11G011350 Citrullus lanatus HOM05D005445 ORTHO05D007043 4.1e-17 92.0 202 34.2
CDE06G0990 Ceratophyllum demersum HOM05D005445 ORTHO05D007043 7.0e-17 91.3 96 50.0
Solyc07g017400.3 Solanum lycopersicum HOM05D005445 ORTHO05D007043 7.0e-17 91.3 91 57.1
Sopen07g006100 Solanum pennellii HOM05D005445 ORTHO05D007043 7.0e-17 91.3 91 57.1
HPP92_028347 Vanilla planifolia HOM05D005445 ORTHO05D007043 7.0e-17 91.3 96 52.1
CSS0000968 Camellia sinensis var. sinensis HOM05D005445 ORTHO05D007043 9.2e-17 90.9 96 54.2
Carub.0004s0844 Capsella rubella HOM05D005445 ORTHO05D007043 9.2e-17 90.9 100 50.0
ECA234G2663 Erigeron canadensis HOM05D005445 ORTHO05D007043 9.2e-17 90.9 91 56.0
Nitab4.5_0000899g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 9.2e-17 90.9 91 56.0
Aqoxy7G02630 Aquilegia oxysepala HOM05D005445 ORTHO05D007043 1.6e-16 90.1 91 50.5
Gohir.D08G027500 Gossypium hirsutum HOM05D005445 ORTHO05D007043 1.6e-16 90.1 92 51.1
Lsat_1_v5_gn_5_80620 Lactuca sativa HOM05D005445 ORTHO05D007043 1.6e-16 90.1 91 56.0
QL11p008649 Quercus lobata HOM05D005445 ORTHO05D007043 1.6e-16 90.1 96 51.0
SalBow5G4362 Salvia bowleyana HOM05D005445 ORTHO05D007043 1.6e-16 90.1 90 56.7
CANSAT80G1260 Cannabis sativa HOM05D005445 ORTHO05D007043 2.7e-16 89.4 96 52.1
Gorai.004G024500 Gossypium raimondii HOM05D005445 ORTHO05D007043 2.7e-16 89.4 233 30.9
Rhsim04G0099700 Rhododendron simsii HOM05D005445 ORTHO05D007043 2.7e-16 89.4 103 48.5
GSVIVG01032266001 Vitis vinifera HOM05D005445 ORTHO05D007043 2.7e-16 89.4 96 49.0
THA.LOC104815270 Tarenaya hassleriana HOM05D005445 ORTHO05D007043 3.5e-16 89.0 91 52.7
TWI63G1185 Tripterygium wilfordii HOM05D005445 ORTHO05D007043 3.5e-16 89.0 163 36.2
Gohir.A08G017100 Gossypium hirsutum HOM05D005445 ORTHO05D007043 4.5e-16 88.6 91 50.5
Thecc.09G196900 Theobroma cacao HOM05D005445 ORTHO05D007043 4.5e-16 88.6 91 51.6
Cc00_g00070 Coffea canephora HOM05D005445 ORTHO05D007043 5.9e-16 88.2 231 33.3
RcHm_v2.0_Chr4g0397601 Rosa chinensis HOM05D005445 ORTHO05D007043 5.9e-16 88.2 91 52.7
FvH4_4g06040 Fragaria vesca HOM05D005445 ORTHO05D007043 7.8e-16 87.8 91 51.6
FAN07G1413 Fragaria x ananassa HOM05D005445 ORTHO05D007043 7.8e-16 87.8 91 51.6
Nitab4.5_0004036g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 7.8e-16 87.8 215 33.5
Os05g0594800 Oryza sativa ssp. japonica HOM05D005445 ORTHO05D007043 7.8e-16 87.8 93 53.8
AUR62027984 Chenopodium quinoa HOM05D005445 ORTHO05D007043 1.0e-15 87.4 89 55.1
Eucgr.C00062 Eucalyptus grandis HOM05D005445 ORTHO05D007043 1.0e-15 87.4 93 50.5
FAN17G2613 Fragaria x ananassa HOM05D005445 ORTHO05D007043 1.0e-15 87.4 91 50.5
Dinv12613 Davidia involucrata HOM05D005445 ORTHO05D007043 1.3e-15 87.0 163 33.1
Thhalv10016855m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 1.3e-15 87.0 98 48.0
Lj4g0004845 Lotus japonicus HOM05D005445 ORTHO05D007043 1.3e-15 87.0 91 50.5
Phvul.002G302400 Phaseolus vulgaris HOM05D005445 ORTHO05D007043 1.3e-15 87.0 96 49.0
Hund03231 Selenicereus undatus HOM05D005445 ORTHO05D007043 1.3e-15 87.0 96 49.0
TAR383G0382 Trochodendron aralioides HOM05D005445 ORTHO05D007043 1.3e-15 87.0 91 53.8
TAR383G1024 Trochodendron aralioides HOM05D005445 ORTHO05D007043 1.3e-15 87.0 91 53.8
VMungo0251G0086 Vigna mungo HOM05D005445 ORTHO05D007043 1.3e-15 87.0 96 47.9
arahy.Tifrunner.gnm1.ann1.HNJF4G Arachis hypogaea HOM05D005445 ORTHO05D007043 1.7e-15 86.7 96 46.9
Duzib168G0912 Durio zibethinus HOM05D005445 ORTHO05D007043 1.7e-15 86.7 90 51.1
Potri.006G078800 Populus trichocarpa HOM05D005445 ORTHO05D007043 1.7e-15 86.7 157 36.9
Sed0003073 Sechium edule HOM05D005445 ORTHO05D007043 1.7e-15 86.7 90 52.2
SEGI_14233 Sequoiadendron giganteum HOM05D005445 ORTHO05D007043 1.7e-15 86.7 96 47.9
ATR0626G233 Amborella trichopoda HOM05D005445 ORTHO05D007043 2.3e-15 86.3 92 52.2
Ciclev10008923m.g Citrus clementina HOM05D005445 ORTHO05D007043 2.9e-15 85.9 91 52.7
COL.COLO4_23410 Corchorus olitorius HOM05D005445 ORTHO05D007043 2.9e-15 85.9 91 50.5
Cpa.g.sc115.19 Carica papaya HOM05D005445 ORTHO05D007043 3.8e-15 85.5 219 31.1
Glyma.05G220700 Glycine max HOM05D005445 ORTHO05D007043 3.8e-15 85.5 210 31.0
Nn8g41135 Nelumbo nucifera HOM05D005445 ORTHO05D007043 5.0e-15 85.1 91 52.7
Sp4g09300 Schrenkiella parvula HOM05D005445 ORTHO05D007043 5.0e-15 85.1 91 50.5
Atru.chr7.1013 Acer truncatum HOM05D005445 ORTHO05D007043 6.6e-15 84.7 96 47.9
CiPaw.16G104300 Carya illinoinensis HOM05D005445 ORTHO05D007043 6.6e-15 84.7 103 46.6
MD16G1238000 Malus domestica HOM05D005445 ORTHO05D007043 6.6e-15 84.7 96 49.0
Psat7g020920 Pisum sativum HOM05D005445 ORTHO05D007043 6.6e-15 84.7 91 48.4
CARHR118490 Cardamine hirsuta HOM05D005445 ORTHO05D007043 8.6e-15 84.3 91 50.5
CiPaw.15G161100 Carya illinoinensis HOM05D005445 ORTHO05D007043 8.6e-15 84.3 96 47.9
Haze_19097 Corylus avellana HOM05D005445 ORTHO05D007043 8.6e-15 84.3 94 48.9
Prupe.1G063800 Prunus persica HOM05D005445 ORTHO05D007043 8.6e-15 84.3 91 48.4
Aa31LG5G9140 Aethionema arabicum HOM05D005445 ORTHO05D007043 1.1e-14 84.0 91 49.5
AT2G26590 Arabidopsis thaliana HOM05D005445 ORTHO05D007043 1.1e-14 84.0 91 49.5
EL10Ac2g03624 Beta vulgaris HOM05D005445 ORTHO05D007043 1.1e-14 84.0 99 48.5
Mapoly0011s0124 Marchantia polymorpha HOM05D005445 ORTHO05D007043 1.1e-14 84.0 70 60.0
Oeu028820.1 Olea europaea HOM05D005445 ORTHO05D007043 1.1e-14 84.0 207 33.3
Pp3c21_370 Physcomitrium patens HOM05D005445 ORTHO05D007043 1.1e-14 84.0 94 48.9
Ca_17431_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 1.5e-14 83.6 91 46.2
Ca_17440_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 1.5e-14 83.6 91 46.2
Lalb_Chr09g0332001 Lupinus albus HOM05D005445 ORTHO05D007043 1.5e-14 83.6 91 49.5
arahy.Tifrunner.gnm1.ann1.K4ERET Arachis hypogaea HOM05D005445 ORTHO05D007043 1.9e-14 83.2 98 44.9
Thhalv10000977m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 1.9e-14 83.2 95 48.4
Medtr8g101230 Medicago truncatula HOM05D005445 ORTHO05D007043 1.9e-14 83.2 91 48.4
Cfa020755 Carpinus fangiana HOM05D005445 ORTHO05D007043 2.5e-14 82.8 93 48.4
PGR142G0598 Punica granatum HOM05D005445 ORTHO05D007043 2.5e-14 82.8 212 31.1
Zm00001eb297230 Zea mays HOM05D005445 ORTHO05D007043 2.5e-14 82.8 96 46.9
AL4G19530 Arabidopsis lyrata HOM05D005445 ORTHO05D007043 3.3e-14 82.4 91 48.4
CAN.G146.2 Capsicum annuum HOM05D005445 ORTHO05D007043 3.3e-14 82.4 163 37.4
C03p32210 Brassica napus HOM05D005445 ORTHO05D007043 4.3e-14 82.0 98 43.9
DCAR_020460 Daucus carota HOM05D005445 ORTHO05D007043 5.6e-14 81.6 91 49.5
TPR.G25470 Trifolium pratense HOM05D005445 ORTHO05D007043 5.6e-14 81.6 91 47.3
unitig_85.g27245 Utricularia gibba HOM05D005445 ORTHO05D007043 5.6e-14 81.6 217 32.3
BcaC01g04909 Brassica carinata HOM05D005445 ORTHO05D007043 7.3e-14 81.3 91 47.3
A03p26880 Brassica napus HOM05D005445 ORTHO05D007043 7.3e-14 81.3 91 47.3
BolC3t15563H Brassica oleracea HOM05D005445 ORTHO05D007043 7.3e-14 81.3 91 47.3
BraA03t11899Z Brassica rapa HOM05D005445 ORTHO05D007043 7.3e-14 81.3 91 47.3
Glyma.08G027200 Glycine max HOM05D005445 ORTHO05D007043 7.3e-14 81.3 90 47.8
Manes.02G221800 Manihot esculenta HOM05D005445 ORTHO05D007043 1.6e-13 80.1 215 31.2
BcaB01g03027 Brassica carinata HOM05D005445 ORTHO05D007043 2.1e-13 79.7 91 47.3
Migut.L01918 Erythranthe guttata HOM05D005445 ORTHO05D007043 1.0e-12 77.4 80 53.8
PSO170G6081 Papaver somniferum HOM05D005445 ORTHO05D007043 6.8e-12 74.7 89 47.2
PSO063G4940 Papaver somniferum HOM05D005445 ORTHO05D007043 1.2e-11 73.9 89 47.2
SMO116G0379 Selaginella moellendorffii HOM05D005445 ORTHO05D007043 3.4e-11 72.4 96 44.8
vmacro20760 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 4.4e-11 72.0 45 75.6
HanXRQChr10g0309531 Helianthus annuus HOM05D005445 ORTHO05D007043 9.8e-11 70.9 80 50.0
vmacro07726 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 6.4e-10 68.2 48 68.8
vmacro10242 Vaccinium macrocarpon HOM05D002150 ORTHO05D002191 6.4e-10 68.2 48 68.8
HPP92_015797 Vanilla planifolia HOM05D005445 ORTHO05D007043 8.3e-10 67.8 70 54.3
vmacro04822 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 1.8e-09 66.6 43 74.4
AUR62020729 Chenopodium quinoa HOM05D005445 ORTHO05D007043 2.0e-08 63.2 71 50.7
Sabra06G0059700 Salix brachista HOM05D005445 ORTHO05D007043 2.0e-08 63.2 94 39.4
CBR_g28055 Chara braunii HOM05D005445 ORTHO05D007043 2.3e-07 59.7 92 41.3


User provided reference genes

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