Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold213G42216 Striga asiatica HOM05D000806 ORTHO05D007429 9.5e-74 280.0 136 100.0
CAN.G3.24 Capsicum annuum HOM05D000806 ORTHO05D007429 8.8e-11 70.9 36 88.9
Peaxi162Scf00021g00088 Petunia axillaris HOM05D000806 ORTHO05D007429 8.8e-11 70.9 36 88.9
Peaxi162Scf00041g00229 Petunia axillaris HOM05D000806 ORTHO05D007429 8.8e-11 70.9 36 88.9
Solyc00g500019.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 8.8e-11 70.9 36 88.9
Solyc00g500066.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 8.8e-11 70.9 36 88.9
Sopen07g012430 Solanum pennellii HOM05D000004 ORTHO05D002324 8.8e-11 70.9 36 88.9
Gohir.A07G163690 Gossypium hirsutum HOM05D000806 ORTHO05D007429 2.0e-10 69.7 36 86.1
DCAR_032495 Daucus carota HOM05D000806 ORTHO05D007429 4.4e-10 68.6 36 83.3
Migut.H01166 Erythranthe guttata HOM05D000806 ORTHO05D007429 4.4e-10 68.6 36 83.3
Migut.H01167 Erythranthe guttata HOM05D000806 ORTHO05D007429 4.4e-10 68.6 36 83.3
Solyc04g039810.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 4.4e-10 68.6 33 93.9
ECA074G0009 Erigeron canadensis HOM05D000806 ORTHO05D002324 5.7e-10 68.2 36 83.3
ECA077G0001 Erigeron canadensis HOM05D000806 ORTHO05D002324 5.7e-10 68.2 36 83.3
HanXRQChr01g0020361 Helianthus annuus HOM05D000806 ORTHO05D007429 5.7e-10 68.2 36 83.3
HanXRQChr02g0041571 Helianthus annuus HOM05D000806 ORTHO05D007429 5.7e-10 68.2 36 83.3
HanXRQChr10g0283551 Helianthus annuus HOM05D000806 ORTHO05D007429 5.7e-10 68.2 36 83.3
HanXRQChr10g0284241 Helianthus annuus HOM05D000806 ORTHO05D007429 5.7e-10 68.2 36 83.3
HanXRQChr10g0289261 Helianthus annuus HOM05D000806 ORTHO05D007429 5.7e-10 68.2 36 83.3
HanXRQChr10g0318201 Helianthus annuus HOM05D000806 ORTHO05D007429 5.7e-10 68.2 36 83.3
HanXRQChr11g0326821 Helianthus annuus HOM05D000806 ORTHO05D007429 5.7e-10 68.2 36 83.3
HanXRQChr13g0404911 Helianthus annuus HOM05D000806 ORTHO05D007429 5.7e-10 68.2 36 83.3
HanXRQCPg0580031 Helianthus annuus HOM05D000806 ORTHO05D007429 5.7e-10 68.2 36 83.3
Cfa021575 Carpinus fangiana HOM05D000806 ORTHO05D002324 7.4e-10 67.8 36 83.3
Duzib198G0003 Durio zibethinus HOM05D000806 ORTHO05D002324 7.4e-10 67.8 36 80.6
Gohir.1Z049999 Gossypium hirsutum HOM05D000806 ORTHO05D002320 7.4e-10 67.8 36 80.6
Gohir.A07G163672 Gossypium hirsutum HOM05D000806 ORTHO05D007429 7.4e-10 67.8 36 80.6
Gohir.D01G102333 Gossypium hirsutum HOM05D000806 ORTHO05D002320 7.4e-10 67.8 36 80.6
Dinv26731 Davidia involucrata HOM05D001133 ORTHO05D000941 9.7e-10 67.4 36 83.3
Dinv29307 Davidia involucrata HOM05D001133 ORTHO05D000941 9.7e-10 67.4 36 83.3
Hma1.2p1_0035F.1_g021940 Hydrangea macrophylla HOM05D000806 ORTHO05D007429 9.7e-10 67.4 36 83.3
MELO3C027107.2 Cucumis melo HOM05D000806 ORTHO05D007429 1.3e-09 67.0 36 80.6
Sed0015006 Sechium edule HOM05D000806 ORTHO05D007429 1.3e-09 67.0 36 80.6
Sed0021403 Sechium edule HOM05D000806 ORTHO05D002324 1.3e-09 67.0 36 80.6
CAN.G1478.9 Capsicum annuum HOM05D000806 ORTHO05D002320 1.7e-09 66.6 36 83.3
Potri.013G162400 Populus trichocarpa HOM05D000806 ORTHO05D007429 1.7e-09 66.6 36 80.6
Nn010s41435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 2.2e-09 66.2 36 80.6
Nn265s45955 Nelumbo nucifera HOM05D000806 ORTHO05D007429 2.2e-09 66.2 36 80.6
Lj2C1239T39 Lonicera japonica HOM05D000806 ORTHO05D002320 2.8e-09 65.9 36 80.6
Lj2P1237T60 Lonicera japonica HOM05D000806 ORTHO05D007429 2.8e-09 65.9 36 80.6
QL93p0311_0018 Quercus lobata HOM05D000806 ORTHO05D002320 2.8e-09 65.9 36 83.3
QL93p1043_0001 Quercus lobata HOM05D000806 ORTHO05D007429 2.8e-09 65.9 36 83.3
HanXRQChr02g0038641 Helianthus annuus HOM05D000806 ORTHO05D007429 3.7e-09 65.5 36 80.6
CsaV3_UNG209270 Cucumis sativus L. HOM05D000806 ORTHO05D007429 4.8e-09 65.1 36 80.6
HanXRQChr15g0474091 Helianthus annuus HOM05D000806 ORTHO05D007429 4.8e-09 65.1 36 80.6
PGR111G0079 Punica granatum HOM05D000806 ORTHO05D007429 4.8e-09 65.1 36 75.0
AUR62004684 Chenopodium quinoa HOM05D000806 ORTHO05D002320 8.2e-09 64.3 36 75.0
Gohir.D04G129256 Gossypium hirsutum HOM05D000806 ORTHO05D002320 8.2e-09 64.3 36 77.8
Lsat_1_v5_gn_9_43721 Lactuca sativa HOM05D000806 ORTHO05D007429 8.2e-09 64.3 36 80.6
TAR633G2212 Trochodendron aralioides HOM05D000890 ORTHO05D000697 1.1e-08 63.9 36 75.0
PSO548G0038 Papaver somniferum HOM05D000806 ORTHO05D007429 1.4e-08 63.5 36 72.2
Eucgr.E02608 Eucalyptus grandis HOM05D000806 ORTHO05D007429 1.8e-08 63.2 36 75.0
Gorai.012G112600 Gossypium raimondii HOM05D000806 ORTHO05D007429 1.8e-08 63.2 36 75.0
RcHm_v2.0_Chr5g0042981 Rosa chinensis HOM05D000806 ORTHO05D007429 1.8e-08 63.2 36 75.0
RcHm_v2.0_CPg0502091 Rosa chinensis HOM05D000806 ORTHO05D007429 1.8e-08 63.2 36 75.0
Sabra10G0056300 Salix brachista HOM05D000806 ORTHO05D002320 1.8e-08 63.2 36 77.8
SabraPtG0003400 Salix brachista HOM05D000806 ORTHO05D002324 1.8e-08 63.2 36 77.8
Gorai.004G277000 Gossypium raimondii HOM05D000806 ORTHO05D007429 2.4e-08 62.8 36 75.0
EL10Ac4g09266 Beta vulgaris HOM05D000806 ORTHO05D007429 3.1e-08 62.4 36 72.2
EL10Ac6g15047 Beta vulgaris HOM05D000806 ORTHO05D002324 3.1e-08 62.4 36 72.2
EL10As1g23054 Beta vulgaris HOM05D000806 ORTHO05D002324 3.1e-08 62.4 36 72.2
EL10As15g24119 Beta vulgaris HOM05D000806 ORTHO05D002320 4.1e-08 62.0 36 72.2
Nitab4.5_0007680g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 5.3e-08 61.6 32 90.6
vmacro22411 Vaccinium macrocarpon HOM05D000806 ORTHO05D007429 5.3e-08 61.6 36 75.0
Ah.03g144240 Amaranthus hybridus HOM05D000806 ORTHO05D002324 7.0e-08 61.2 36 72.2
Gohir.A12G124900 Gossypium hirsutum HOM05D000806 ORTHO05D007429 7.0e-08 61.2 36 75.0
Lalb_Chr23g0274521 Lupinus albus HOM05D000806 ORTHO05D007429 7.0e-08 61.2 36 75.0
Lalb_Chr25g0282881 Lupinus albus HOM05D000806 ORTHO05D007429 7.0e-08 61.2 36 75.0
Hund22773 Selenicereus undatus HOM05D000806 ORTHO05D007429 9.1e-08 60.8 36 72.2
Sc03g0009990 Simmondsia chinensis HOM05D000806 ORTHO05D007429 9.1e-08 60.8 36 69.4
Sc22g0003430 Simmondsia chinensis HOM05D000806 ORTHO05D007429 9.1e-08 60.8 36 69.4
EL10As15g24117 Beta vulgaris HOM05D000806 ORTHO05D007429 1.2e-07 60.5 84 38.1
Haze_07716 Corylus avellana HOM05D000806 ORTHO05D007429 1.2e-07 60.5 36 77.8
Eucgr.I02538 Eucalyptus grandis HOM05D000806 ORTHO05D007429 1.2e-07 60.5 36 69.4
Gorai.004G061100 Gossypium raimondii HOM05D000806 ORTHO05D007429 1.2e-07 60.5 36 75.0
RhsimPtG0003100 Rhododendron simsii HOM05D000806 ORTHO05D002324 1.2e-07 60.5 36 72.2
Solyc10g045220.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 1.2e-07 60.5 36 77.8
Ah.09g227360 Amaranthus hybridus HOM05D000806 ORTHO05D007429 1.5e-07 60.1 36 69.4
Ah.10g027160 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.5e-07 60.1 36 69.4
Ah.10g027380 Amaranthus hybridus HOM05D000806 ORTHO05D007429 1.5e-07 60.1 36 69.4
Ah.10g027510 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.5e-07 60.1 36 69.4
Gohir.1Z050266 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.5e-07 60.1 36 69.4
TAR371G0631 Trochodendron aralioides HOM05D000806 ORTHO05D007429 2.6e-07 59.3 36 72.2
unitig_91.g26508 Utricularia gibba HOM05D000806 ORTHO05D002320 2.6e-07 59.3 36 69.4
HanXRQChr11g0345151 Helianthus annuus HOM05D000806 ORTHO05D007429 3.4e-07 58.9 36 75.0
Oeu062853.1 Olea europaea HOM05D000806 ORTHO05D007429 3.4e-07 58.9 35 77.1
Ah.10g027920 Amaranthus hybridus HOM05D000806 ORTHO05D002324 4.5e-07 58.5 36 66.7
Ah.10g028630 Amaranthus hybridus HOM05D000806 ORTHO05D002324 4.5e-07 58.5 36 66.7
ATR1137G001 Amborella trichopoda HOM05D000806 ORTHO05D007429 4.5e-07 58.5 36 72.2
EL10Ac9g20703 Beta vulgaris HOM05D000806 ORTHO05D007429 4.5e-07 58.5 33 75.8
GSVIVG01030619001 Vitis vinifera HOM05D000806 ORTHO05D007429 4.5e-07 58.5 37 75.7
HanXRQChr16g0528981 Helianthus annuus HOM05D000806 ORTHO05D007429 7.7e-07 57.8 28 92.9
AL2G20666 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 1.0e-06 57.4 36 69.4
AL2G21550 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 1.0e-06 57.4 36 69.4
ATCG00520 Arabidopsis thaliana HOM05D000806 ORTHO05D007429 1.0e-06 57.4 36 69.4
A06p23190 Brassica napus HOM05D000806 ORTHO05D007429 1.0e-06 57.4 36 69.4
C09p29600 Brassica napus HOM05D000806 ORTHO05D007429 1.0e-06 57.4 36 69.4
C09p40230 Brassica napus HOM05D000806 ORTHO05D007429 1.0e-06 57.4 36 69.4
BolC9t56915H Brassica oleracea HOM05D000806 ORTHO05D007429 1.0e-06 57.4 36 69.4
BolSC29t60467H Brassica oleracea HOM05D000806 ORTHO05D007429 1.0e-06 57.4 36 69.4
BolSC35t60646H Brassica oleracea HOM05D000806 ORTHO05D007429 1.0e-06 57.4 36 69.4
BolSC35t60750H Brassica oleracea HOM05D000806 ORTHO05D007429 1.0e-06 57.4 36 69.4
BolSC46t61035H Brassica oleracea HOM05D000806 ORTHO05D007429 1.0e-06 57.4 36 69.4
BolSC47t61097H Brassica oleracea HOM05D000806 ORTHO05D007429 1.0e-06 57.4 36 69.4
BolSC49t61183H Brassica oleracea HOM05D000806 ORTHO05D007429 1.0e-06 57.4 36 69.4
BraSC103t45466Z Brassica rapa HOM05D000806 ORTHO05D007429 1.0e-06 57.4 36 69.4
BraSC140t45575Z Brassica rapa HOM05D000806 ORTHO05D007429 1.0e-06 57.4 36 69.4
BraSC25t45866Z Brassica rapa HOM05D000806 ORTHO05D007429 1.0e-06 57.4 36 69.4
BraSC59t46591Z Brassica rapa HOM05D000806 ORTHO05D007429 1.0e-06 57.4 36 69.4
CARHR282100 Cardamine hirsuta HOM05D000806 ORTHO05D007429 1.0e-06 57.4 36 69.4
Thhalv10010960m.g Eutrema salsugineum HOM05D000806 ORTHO05D007429 1.0e-06 57.4 36 69.4
CDE02G0843 Ceratophyllum demersum HOM05D001966 ORTHO05D007227 1.3e-06 57.0 36 66.7
CDE02G2600 Ceratophyllum demersum HOM05D000806 ORTHO05D002320 1.3e-06 57.0 36 66.7
CAN.G1163.7 Capsicum annuum HOM05D000806 ORTHO05D007429 2.9e-06 55.8 31 83.9
FAN17G0466 Fragaria x ananassa HOM05D000806 ORTHO05D007429 5.0e-06 55.1 43 53.5
Hund03830 Selenicereus undatus HOM05D000806 ORTHO05D007429 5.0e-06 55.1 36 63.9
Hund28451 Selenicereus undatus HOM05D000806 ORTHO05D007429 5.0e-06 55.1 36 63.9
Hund28749 Selenicereus undatus HOM05D000806 ORTHO05D007429 5.0e-06 55.1 36 63.9
Hund28839 Selenicereus undatus HOM05D000806 ORTHO05D007429 5.0e-06 55.1 36 63.9
Hund31091 Selenicereus undatus HOM05D000806 ORTHO05D007429 5.0e-06 55.1 36 63.9
Hund31110 Selenicereus undatus HOM05D000806 ORTHO05D007429 5.0e-06 55.1 36 63.9
arahy.Tifrunner.gnm1.ann1.Y8HZNS Arachis hypogaea HOM05D000806 ORTHO05D002320 6.5e-06 54.7 86 39.5
arahy.Tifrunner.gnm1.ann1.X4SEM1 Arachis hypogaea HOM05D000540 ORTHO05D000681 8.5e-06 54.3 36 66.7
Hund08021 Selenicereus undatus HOM05D002432 ORTHO05D000695 8.5e-06 54.3 32 75.0


User provided reference genes

Program Settings