Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold205G41773 Striga asiatica HOM05D003321 ORTHO05D005161 1.9e-270 935.3 465 100.0
SGA_v2.0_scaffold205G41764 Striga asiatica HOM05D003321 ORTHO05D005161 2.8e-189 665.6 370 90.0
MSTRG.3218 Avicennia marina HOM05D003321 ORTHO05D005161 1.3e-178 630.2 370 83.8
Migut.H00892 Erythranthe guttata HOM05D003321 ORTHO05D005161 1.9e-174 616.3 370 82.2
SalBow1G0468 Salvia bowleyana HOM05D003321 ORTHO05D005161 1.7e-170 603.2 377 79.0
Oeu037176.3 Olea europaea HOM05D003321 ORTHO05D005161 1.4e-169 600.1 370 79.5
Migut.K01331 Erythranthe guttata HOM05D003321 ORTHO05D005161 4.1e-169 598.6 370 80.3
CiPaw.04G019600 Carya illinoinensis HOM05D003321 ORTHO05D005161 3.0e-167 592.4 370 78.4
RhsimUnG0055900 Rhododendron simsii HOM05D003321 ORTHO05D005161 3.0e-167 592.4 372 78.2
Haze_14579 Corylus avellana HOM05D003321 ORTHO05D005161 5.1e-167 591.7 370 77.8
CiPaw.03G029600 Carya illinoinensis HOM05D003321 ORTHO05D005161 1.1e-166 590.5 370 77.8
Duzib264G0140 Durio zibethinus HOM05D003321 ORTHO05D005161 1.1e-166 590.5 370 78.1
Eucgr.I01920 Eucalyptus grandis HOM05D003321 ORTHO05D005161 1.5e-166 590.1 370 77.8
Ciclev10011266m.g Citrus clementina HOM05D003321 ORTHO05D005161 2.5e-166 589.3 370 78.4
Actinidia06077 Actinidia chinensis HOM05D003321 ORTHO05D005161 5.6e-166 588.2 370 77.3
Dinv33721 Davidia involucrata HOM05D003321 ORTHO05D005161 9.5e-166 587.4 370 78.1
CANSAT64G1196 Cannabis sativa HOM05D003321 ORTHO05D005161 1.6e-165 586.6 370 78.4
QL02p080714 Quercus lobata HOM05D003321 ORTHO05D005161 1.6e-165 586.6 370 78.1
Thecc.04G075500 Theobroma cacao HOM05D003321 ORTHO05D005161 1.6e-165 586.6 370 77.8
Actinidia23569 Actinidia chinensis HOM05D003321 ORTHO05D005161 4.7e-165 585.1 370 77.0
Gorai.007G078500 Gossypium raimondii HOM05D003321 ORTHO05D005161 6.2e-165 584.7 370 77.3
COL.COLO4_25165 Corchorus olitorius HOM05D003321 ORTHO05D005161 8.1e-165 584.3 370 77.6
Gohir.D09G021100 Gossypium hirsutum HOM05D003321 ORTHO05D005161 1.1e-164 583.9 370 77.3
Gorai.006G024900 Gossypium raimondii HOM05D003321 ORTHO05D005161 1.1e-164 583.9 370 77.3
Lju41A25T61 Lonicera japonica HOM05D003321 ORTHO05D005161 1.4e-164 583.6 372 76.1
Gohir.A09G021800 Gossypium hirsutum HOM05D003321 ORTHO05D005161 1.8e-164 583.2 370 77.0
Atru.chr8.1903 Acer truncatum HOM05D003321 ORTHO05D005161 2.3e-164 582.8 370 77.8
Peaxi162Scf00129g00539 Petunia axillaris HOM05D003321 ORTHO05D005161 3.1e-164 582.4 370 76.8
PGR142G0788 Punica granatum HOM05D003321 ORTHO05D005161 8.9e-164 580.9 370 76.2
GSVIVG01011349001 Vitis vinifera HOM05D003321 ORTHO05D005161 1.2e-163 580.5 370 76.8
Gohir.A11G069100 Gossypium hirsutum HOM05D003321 ORTHO05D005161 1.5e-163 580.1 370 76.8
Lj7A400T32 Lonicera japonica HOM05D003321 ORTHO05D005161 1.5e-163 580.1 368 76.9
DCAR_011159 Daucus carota HOM05D003321 ORTHO05D005161 2.6e-163 579.3 370 77.0
Gohir.D11G073100 Gossypium hirsutum HOM05D003321 ORTHO05D005161 3.4e-163 578.9 370 76.8
BcaC06g30900 Brassica carinata HOM05D003321 ORTHO05D005161 4.4e-163 578.6 370 76.5
PGSC0003DMG400018099 Solanum tuberosum HOM05D003321 ORTHO05D005161 9.9e-163 577.4 370 76.2
Solyc02g087710.3 Solanum lycopersicum HOM05D003321 ORTHO05D005161 1.3e-162 577.0 370 76.2
Sopen02g032440 Solanum pennellii HOM05D003321 ORTHO05D005161 1.3e-162 577.0 370 76.2
PGSC0003DMG400001414 Solanum tuberosum HOM05D003321 ORTHO05D005161 1.3e-162 577.0 370 76.2
BcaC03g17525 Brassica carinata HOM05D003321 ORTHO05D005161 1.7e-162 576.6 389 73.5
A02p36020 Brassica napus HOM05D003321 ORTHO05D005161 1.7e-162 576.6 389 73.5
C02p54860 Brassica napus HOM05D003321 ORTHO05D005161 1.7e-162 576.6 389 73.5
BraA06t26956Z Brassica rapa HOM05D003321 ORTHO05D005161 2.2e-162 576.2 370 76.2
CARHR151710 Cardamine hirsuta HOM05D003321 ORTHO05D005161 2.2e-162 576.2 370 75.4
A06p40380 Brassica napus HOM05D003321 ORTHO05D005161 2.9e-162 575.9 370 75.9
BraA02t08601Z Brassica rapa HOM05D003321 ORTHO05D005161 3.7e-162 575.5 389 73.3
CsaV3_3G041690 Cucumis sativus L. HOM05D003321 ORTHO05D005161 6.4e-162 574.7 370 75.9
BolC2t11547H Brassica oleracea HOM05D003321 ORTHO05D005161 8.4e-162 574.3 389 73.3
TWI60G1051 Tripterygium wilfordii HOM05D003321 ORTHO05D005161 8.4e-162 574.3 370 75.4
CAN.G206.123 Capsicum annuum HOM05D003321 ORTHO05D005161 1.1e-161 573.9 370 75.7
TWI34G1126 Tripterygium wilfordii HOM05D003321 ORTHO05D005161 1.1e-161 573.9 370 74.9
Aa31LG2G4470 Aethionema arabicum HOM05D003321 ORTHO05D005161 1.4e-161 573.5 370 75.4
BcaC06g33636 Brassica carinata HOM05D003321 ORTHO05D005161 1.4e-161 573.5 370 75.9
BolC7t44284H Brassica oleracea HOM05D003321 ORTHO05D005161 1.4e-161 573.5 370 75.9
Sp2g17380 Schrenkiella parvula HOM05D003321 ORTHO05D005161 1.4e-161 573.5 370 75.4
Ca_13366_v3 Cicer arietinum L. HOM05D003321 ORTHO05D005161 1.9e-161 573.2 370 74.3
BcaB07g30122 Brassica carinata HOM05D003321 ORTHO05D005161 3.2e-161 572.4 389 72.8
C07p37670 Brassica napus HOM05D003321 ORTHO05D005161 3.2e-161 572.4 370 75.7
Lsat_1_v5_gn_2_88641 Lactuca sativa HOM05D003321 ORTHO05D005161 3.2e-161 572.4 384 72.9
MELO3C009890.2 Cucumis melo HOM05D003321 ORTHO05D005161 4.1e-161 572.0 370 75.7
Sed0022026 Sechium edule HOM05D003321 ORTHO05D005161 4.1e-161 572.0 370 75.7
Lsat_1_v5_gn_4_46121 Lactuca sativa HOM05D003321 ORTHO05D005161 7.1e-161 571.2 370 75.4
Nitab4.5_0003314g0110 Nicotiana tabacum HOM05D003321 ORTHO05D005161 9.2e-161 570.9 372 76.1
Glyma.01G136100 Glycine max HOM05D003321 ORTHO05D005161 2.1e-160 569.7 370 74.6
Phvul.004G026200 Phaseolus vulgaris HOM05D003321 ORTHO05D005161 2.1e-160 569.7 370 74.3
Prupe.3G271500 Prunus persica HOM05D003321 ORTHO05D005161 2.1e-160 569.7 370 76.2
VMungo0464G0737 Vigna mungo HOM05D003321 ORTHO05D005161 2.1e-160 569.7 370 74.3
Glyma.03G031900 Glycine max HOM05D003321 ORTHO05D005161 2.7e-160 569.3 370 74.3
Lalb_Chr06g0175461 Lupinus albus HOM05D003321 ORTHO05D005161 2.7e-160 569.3 366 75.4
HanXRQChr16g0519581 Helianthus annuus HOM05D003321 ORTHO05D005161 3.5e-160 568.9 370 75.1
Nitab4.5_0009739g0020 Nicotiana tabacum HOM05D003321 ORTHO05D005161 7.8e-160 567.8 386 73.8
Lj2g0002473 Lotus japonicus HOM05D003321 ORTHO05D005161 1.0e-159 567.4 370 73.8
arahy.Tifrunner.gnm1.ann1.QM6JB0 Arachis hypogaea HOM05D003321 ORTHO05D005161 1.3e-159 567.0 370 74.3
THA.LOC104805449 Tarenaya hassleriana HOM05D003321 ORTHO05D005161 1.3e-159 567.0 370 74.6
TPR.G20170 Trifolium pratense HOM05D003321 ORTHO05D005161 1.7e-159 566.6 370 73.5
Medtr5g082570 Medicago truncatula HOM05D003321 ORTHO05D005161 2.3e-159 566.2 370 73.8
Lalb_Chr02g0159551 Lupinus albus HOM05D003321 ORTHO05D005161 3.0e-159 565.8 370 74.1
Manes.15G172400 Manihot esculenta HOM05D003321 ORTHO05D005161 3.0e-159 565.8 370 74.9
HanXRQChr02g0056421 Helianthus annuus HOM05D003321 ORTHO05D005161 3.9e-159 565.5 384 72.4
MD17G1047600 Malus domestica HOM05D003321 ORTHO05D005161 3.9e-159 565.5 370 75.1
Manes.15G176600 Manihot esculenta HOM05D003321 ORTHO05D005161 5.1e-159 565.1 370 74.9
Nn4g23059 Nelumbo nucifera HOM05D003321 ORTHO05D005161 8.6e-159 564.3 372 73.1
Psat6g008440 Pisum sativum HOM05D003321 ORTHO05D005161 8.6e-159 564.3 389 71.2
Ca_05956_v3 Cicer arietinum L. HOM05D003321 ORTHO05D005161 1.1e-158 563.9 370 73.0
Medtr1g022345 Medicago truncatula HOM05D003321 ORTHO05D005161 2.5e-158 562.8 370 73.0
AT3G28730 Arabidopsis thaliana HOM05D003321 ORTHO05D005161 5.6e-158 561.6 371 73.9
VMungo1127G1679 Vigna mungo HOM05D003321 ORTHO05D005161 2.8e-157 559.3 377 72.4
ECA234G3709 Erigeron canadensis HOM05D003321 ORTHO05D005161 3.6e-157 558.9 370 73.0
MD09G1047500 Malus domestica HOM05D003321 ORTHO05D005161 3.6e-157 558.9 370 74.9
AL5G18450 Arabidopsis lyrata HOM05D003321 ORTHO05D005161 4.7e-157 558.5 370 73.0
Lj2g0024928 Lotus japonicus HOM05D003321 ORTHO05D005161 4.7e-157 558.5 370 73.0
CSS0001778 Camellia sinensis var. sinensis HOM05D003321 ORTHO05D005161 6.2e-157 558.1 370 74.6
Hund02846 Selenicereus undatus HOM05D003321 ORTHO05D005161 6.2e-157 558.1 370 74.3
Carub.0005s0728 Capsella rubella HOM05D003321 ORTHO05D005161 8.1e-157 557.8 371 73.9
Potri.017G078500 Populus trichocarpa HOM05D003321 ORTHO05D005161 8.1e-157 557.8 370 74.1
TPR.G38431 Trifolium pratense HOM05D003321 ORTHO05D005161 1.1e-156 557.4 370 73.5
AUR62011989 Chenopodium quinoa HOM05D003321 ORTHO05D005161 1.4e-156 557.0 378 72.0
Potri.004G124000 Populus trichocarpa HOM05D003321 ORTHO05D005161 1.8e-156 556.6 370 73.8
Sc17g0001240 Simmondsia chinensis HOM05D003321 ORTHO05D005161 4.0e-156 555.4 370 74.3
PSO591G0346 Papaver somniferum HOM05D003321 ORTHO05D005161 6.8e-156 554.7 370 71.4
PSO832G3448 Papaver somniferum HOM05D003321 ORTHO05D005161 6.8e-156 554.7 370 71.4
TAR622G1354 Trochodendron aralioides HOM05D003321 ORTHO05D005161 6.8e-156 554.7 370 73.0
Hund09520 Selenicereus undatus HOM05D003321 ORTHO05D005161 1.5e-155 553.5 370 73.8
Phvul.011G212400 Phaseolus vulgaris HOM05D003321 ORTHO05D005161 2.0e-155 553.1 370 72.7
AUR62032308 Chenopodium quinoa HOM05D003321 ORTHO05D005161 2.6e-155 552.7 368 73.4
ClCG10G014840 Citrullus lanatus HOM05D003321 ORTHO05D005161 4.4e-155 552.0 370 74.6
Thhalv10003803m.g Eutrema salsugineum HOM05D003321 ORTHO05D005161 4.4e-155 552.0 370 73.2
vmacro05729 Vaccinium macrocarpon HOM05D003321 ORTHO05D005161 2.9e-154 549.3 361 77.0
Ah.11g050340 Amaranthus hybridus HOM05D003321 ORTHO05D005161 4.9e-154 548.5 368 72.3
CDE05G0865 Ceratophyllum demersum HOM05D003321 ORTHO05D005161 4.9e-154 548.5 376 69.4
RcHm_v2.0_Chr2g0169081 Rosa chinensis HOM05D003321 ORTHO05D005161 3.2e-153 545.8 370 71.1
EL10Ac5g10521 Beta vulgaris HOM05D003321 ORTHO05D005161 7.1e-153 544.7 368 72.6
MBI17_g17503_MAGBIO Magnolia biondii HOM05D003321 ORTHO05D005161 1.6e-152 543.5 370 71.9
Aqoxy3G03281 Aquilegia oxysepala HOM05D003321 ORTHO05D005161 3.6e-149 532.3 370 70.8
FAN02G3930 Fragaria x ananassa HOM05D003321 ORTHO05D005161 6.2e-149 531.6 370 69.7
FAN14G0823 Fragaria x ananassa HOM05D003321 ORTHO05D005161 6.2e-149 531.6 371 69.3
FvH4_6g49210 Fragaria vesca HOM05D003321 ORTHO05D005161 1.8e-148 530.0 370 69.5
FAN09G2289 Fragaria x ananassa HOM05D003321 ORTHO05D005161 2.4e-148 529.6 370 69.2
FAN14G5472 Fragaria x ananassa HOM05D003321 ORTHO05D005161 2.4e-148 529.6 370 69.2
Psat2g033240 Pisum sativum HOM05D003321 ORTHO05D005161 9.0e-148 527.7 370 69.7
ATR1120G139 Amborella trichopoda HOM05D003321 ORTHO05D005161 1.2e-147 527.3 370 68.6
FAN09G2305 Fragaria x ananassa HOM05D003321 ORTHO05D005161 2.6e-147 526.2 370 68.9
arahy.Tifrunner.gnm1.ann1.T0AAPV Arachis hypogaea HOM05D003321 ORTHO05D005161 9.9e-147 524.2 370 70.0
FAN05G4145 Fragaria x ananassa HOM05D003321 ORTHO05D005161 1.3e-146 523.9 370 68.9
Os01g0184900 Oryza sativa ssp. japonica HOM05D003321 ORTHO05D005161 1.6e-144 516.9 370 67.6
ECA238G2291 Erigeron canadensis HOM05D003321 ORTHO05D005161 1.7e-143 513.5 384 66.1
HPP92_017969 Vanilla planifolia HOM05D003321 ORTHO05D005161 2.5e-142 509.6 371 67.9
Os05g0182600 Oryza sativa ssp. japonica HOM05D003321 ORTHO05D005161 1.2e-139 500.7 370 65.4
SEGI_13423 Sequoiadendron giganteum HOM05D003321 ORTHO05D005161 2.9e-138 496.1 370 64.1
SEGI_27754 Sequoiadendron giganteum HOM05D003321 ORTHO05D005161 6.4e-138 495.0 370 63.5
PSO384G3545 Papaver somniferum HOM05D003321 ORTHO05D005161 2.7e-136 489.6 370 63.2
Sabra17G0069700 Salix brachista HOM05D003321 ORTHO05D005161 6.0e-136 488.4 372 67.5
Mapoly0030s0009 Marchantia polymorpha HOM05D003321 ORTHO05D005161 2.8e-133 479.6 370 60.5
Zm00001eb282920 Zea mays HOM05D003321 ORTHO05D005161 1.8e-132 476.9 368 62.5
Pp3c9_4400 Physcomitrium patens HOM05D003321 ORTHO05D005161 1.2e-131 474.2 370 60.3
Nitab4.5_0000564g0350 Nicotiana tabacum HOM05D003321 ORTHO05D005161 3.8e-130 469.2 365 67.1
AagrBONN_evm.TU.Sc2ySwM_362.1417 Anthoceros agrestis HOM05D003321 ORTHO05D005161 3.2e-129 466.1 368 59.5
Cc07_g03060 Coffea canephora HOM05D003321 ORTHO05D005161 2.1e-128 463.4 301 76.7
AagrBONN_evm.TU.Sc2ySwM_362.1279 Anthoceros agrestis HOM05D003321 ORTHO05D005161 1.9e-121 440.3 368 56.8
SMO356G0125 Selaginella moellendorffii HOM05D003321 ORTHO05D005161 1.0e-119 434.5 371 57.4
unitig_899.g15507 Utricularia gibba HOM05D003321 ORTHO05D005161 1.1e-118 431.0 270 78.5
Hma1.2p1_0247F.1_g101800 Hydrangea macrophylla HOM05D003321 ORTHO05D005161 2.8e-109 399.8 263 74.9
Zm00001eb337810 Zea mays HOM05D003321 ORTHO05D005161 1.8e-100 370.5 273 67.0
Rhsim05G0106500 Rhododendron simsii HOM05D003321 ORTHO05D005161 2.0e-99 367.1 400 52.5
Duzib147G1608 Durio zibethinus HOM05D003321 ORTHO05D005161 1.1e-97 361.3 359 54.3
CSS0018217 Camellia sinensis var. sinensis HOM05D003321 ORTHO05D005161 1.1e-89 334.7 204 78.9
CSS0041948 Camellia sinensis var. sinensis HOM05D003321 ORTHO05D005161 1.1e-89 334.7 204 78.9
Cfa007905 Carpinus fangiana HOM05D003321 ORTHO05D005161 5.4e-76 289.3 177 80.2
Cre01.g029450 Chlamydomonas reinhardtii HOM05D003321 ORTHO05D005161 2.8e-72 276.9 377 41.1
Psat3g002600 Pisum sativum HOM05D003321 ORTHO05D004492 7.5e-70 268.9 254 57.1
PRCOL_00006095 Prasinoderma coloniale HOM05D003321 ORTHO05D005161 8.3e-69 265.4 389 37.5
Thhalv10008631m.g Eutrema salsugineum HOM05D003321 ORTHO05D005161 9.2e-68 261.9 224 56.2
Lj1g0009615 Lotus japonicus HOM05D003321 ORTHO05D005161 7.3e-65 252.3 245 53.9
Oeu033336.1 Olea europaea HOM05D003321 ORTHO05D005161 2.6e-62 243.8 225 57.3
CBR_g20179 Chara braunii HOM05D003321 ORTHO05D005161 5.8e-62 242.7 360 39.4
Glyma.13G064800 Glycine max HOM05D003321 ORTHO05D005161 3.1e-55 220.3 163 66.9
MCO12G387 Micromonas commoda HOM05D003321 ORTHO05D005161 6.8e-55 219.2 378 32.5
Lsat_1_v5_gn_8_150800 Lactuca sativa HOM05D003321 ORTHO05D033839 6.4e-45 186.0 159 61.0
Cfa021690 Carpinus fangiana HOM05D003321 ORTHO05D005161 2.5e-41 174.1 405 27.7
HanXRQChr04g0102631 Helianthus annuus HOM05D003321 ORTHO05D019677 1.8e-39 167.9 122 66.4
unitig_899.g15508 Utricularia gibba HOM05D007118 ORTHO05D008957 3.8e-37 160.2 94 79.8
HanXRQChr06g0173771 Helianthus annuus HOM05D003321 ORTHO05D019677 1.0e-34 152.1 103 68.0
PGSC0003DMG400001413 Solanum tuberosum HOM05D003321 ORTHO05D394828 5.1e-34 149.8 164 53.0
HanXRQChr01g0022931 Helianthus annuus HOM05D003321 ORTHO05D019677 1.1e-33 148.7 98 69.4
Aqoxy3G00239 Aquilegia oxysepala HOM05D003321 ORTHO05D019677 9.6e-33 145.6 192 42.2
Aqoxy3G03302 Aquilegia oxysepala HOM05D003321 ORTHO05D019677 6.2e-32 142.9 139 48.9
Lsat_1_v5_gn_6_49381 Lactuca sativa HOM05D003321 ORTHO05D033839 5.3e-31 139.8 86 76.7
HanXRQChr15g0486151 Helianthus annuus HOM05D003321 ORTHO05D019677 2.6e-30 137.5 86 73.3
HanXRQChr11g0334501 Helianthus annuus HOM05D003321 ORTHO05D019677 7.6e-30 136.0 86 72.1
BcaB01g02066 Brassica carinata HOM05D003321 ORTHO05D005161 1.1e-28 132.1 207 40.6
CDE05G3094 Ceratophyllum demersum HOM05D003321 ORTHO05D005161 9.3e-28 129.0 139 48.2
Hma1.2p1_0105F.1_g050590 Hydrangea macrophylla HOM05D003321 ORTHO05D005161 1.3e-24 118.6 112 55.4
Cc07_g03050 Coffea canephora HOM05D003321 ORTHO05D005161 4.0e-23 113.6 61 86.9
Actinidia36023 Actinidia chinensis HOM05D003321 ORTHO05D013943 9.9e-22 109.0 66 78.8
ECA236G4825 Erigeron canadensis HOM05D003321 ORTHO05D186893 9.9e-22 109.0 367 26.4
Lsat_1_v5_gn_5_101681 Lactuca sativa HOM05D003321 ORTHO05D000541 2.4e-20 104.4 113 48.7
TAR371G0510 Trochodendron aralioides HOM05D003321 ORTHO05D414592 2.7e-19 100.9 104 50.0
Sopen02g032430 Solanum pennellii HOM05D003321 ORTHO05D051122 7.4e-17 92.8 79 57.0
BolC2t11553H Brassica oleracea HOM05D003321 ORTHO05D033839 5.8e-14 83.2 90 52.2
HanXRQChr17g0550931 Helianthus annuus HOM05D003321 ORTHO05D224906 7.1e-12 76.3 73 50.7
ECA234G4637 Erigeron canadensis HOM05D003321 ORTHO05D008593 3.9e-10 70.5 120 36.7
Hma1.2p1_0235F.1_g098910 Hydrangea macrophylla HOM05D003321 ORTHO05D005161 2.8e-08 64.3 56 60.7
Solyc02g087680.1 Solanum lycopersicum HOM05D003321 ORTHO05D051122 6.3e-08 63.2 46 67.4


User provided reference genes

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