Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 0.0e+00 2600.1 1309 100.0
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 0.0e+00 1875.1 1318 71.9
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 0.0e+00 1674.8 1328 63.5
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1666.4 1330 63.5
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 0.0e+00 1652.9 1324 63.9
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 0.0e+00 1646.7 1324 63.7
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 0.0e+00 1639.0 1324 63.7
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 0.0e+00 1634.0 1324 63.4
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 0.0e+00 1633.6 1328 63.0
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 0.0e+00 1632.1 1326 62.7
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 0.0e+00 1629.8 1322 61.7
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 0.0e+00 1619.4 1324 62.5
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1613.6 1349 61.5
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 0.0e+00 1606.3 1325 62.2
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1605.1 1322 62.6
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 0.0e+00 1597.0 1318 60.8
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 0.0e+00 1595.5 1331 61.3
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1590.9 1325 59.8
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 0.0e+00 1588.5 1326 60.9
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 0.0e+00 1575.5 1326 60.6
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 0.0e+00 1571.6 1329 61.0
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1569.3 1324 59.8
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 0.0e+00 1568.1 1329 60.3
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 0.0e+00 1568.1 1243 64.4
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 0.0e+00 1563.9 1324 60.6
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 0.0e+00 1561.2 1274 62.8
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1559.3 1329 60.7
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 0.0e+00 1558.5 1322 59.0
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1557.3 1250 63.2
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 0.0e+00 1557.0 1337 59.8
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1555.8 1325 59.2
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1554.7 1325 59.2
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 0.0e+00 1553.9 1325 59.1
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 0.0e+00 1553.1 1323 59.2
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 0.0e+00 1551.2 1321 60.3
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1550.4 1325 58.9
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 0.0e+00 1547.3 1330 60.5
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1545.4 1332 58.5
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 0.0e+00 1540.8 1325 59.0
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1540.4 1325 58.5
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1538.9 1324 59.3
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 0.0e+00 1538.1 1322 59.2
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1530.0 1328 58.9
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1526.5 1329 58.3
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1525.0 1325 59.3
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 0.0e+00 1523.5 1322 57.9
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 0.0e+00 1522.3 1333 59.2
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 0.0e+00 1508.8 1327 57.3
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1502.3 1244 61.9
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 0.0e+00 1501.1 1324 57.1
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 0.0e+00 1494.9 1316 58.6
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 0.0e+00 1492.6 1259 60.5
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1491.1 1323 58.3
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1489.9 1243 59.7
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 0.0e+00 1487.6 1558 53.1
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 0.0e+00 1483.0 1327 57.8
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 0.0e+00 1480.7 1326 57.2
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 0.0e+00 1478.0 1328 57.6
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 0.0e+00 1477.6 1326 57.6
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 0.0e+00 1473.8 1325 57.4
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 0.0e+00 1472.2 1326 57.2
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 0.0e+00 1471.8 1329 57.0
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 0.0e+00 1470.7 1329 57.4
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 0.0e+00 1469.1 1340 56.3
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 0.0e+00 1466.8 1264 59.2
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1457.2 1329 56.5
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 0.0e+00 1456.0 1319 58.2
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1455.3 1338 56.1
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 0.0e+00 1449.9 1313 57.0
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 0.0e+00 1449.9 1318 56.9
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 0.0e+00 1449.1 1320 56.4
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1416.4 1323 55.4
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 0.0e+00 1415.2 1329 55.8
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 0.0e+00 1413.7 1323 55.3
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 0.0e+00 1413.3 1326 55.7
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 0.0e+00 1411.7 1278 58.1
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1410.6 1323 55.2
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1407.9 1195 59.1
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 0.0e+00 1399.0 1323 55.3
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 0.0e+00 1395.2 1326 54.9
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 0.0e+00 1392.9 1325 54.6
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 0.0e+00 1379.0 1326 54.4
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1378.6 1092 63.6
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 0.0e+00 1365.9 1353 52.8
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 0.0e+00 1346.3 1099 61.5
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 0.0e+00 1341.3 1338 52.0
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 0.0e+00 1328.9 1320 53.6
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 0.0e+00 1307.4 1341 51.2
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1301.2 1133 58.1
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 0.0e+00 1270.0 1113 57.6
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 0.0e+00 1263.8 1350 50.6
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 0.0e+00 1260.0 1319 51.6
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 0.0e+00 1251.1 1142 56.6
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 0.0e+00 1232.2 1091 57.5
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 0.0e+00 1170.2 1324 49.9
CiPaw.01G284000 Carya illinoinensis HOM05D006356 ORTHO05D007903 0.0e+00 1120.9 945 59.8
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 0.0e+00 1079.7 840 64.5
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 1.8e-311 1072.8 1328 47.1
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 1.7e-308 1063.1 1255 47.0
Cpa.g.sc1.373 Carica papaya HOM05D006356 ORTHO05D007903 8.3e-300 1034.2 906 58.1
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 5.2e-286 988.4 755 66.0
unitig_736.g22670 Utricularia gibba HOM05D006356 ORTHO05D007903 1.2e-282 977.2 853 57.6
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 1.9e-240 837.0 1370 37.4
SMO352G0087 Selaginella moellendorffii HOM05D006356 ORTHO05D007903 4.4e-224 782.7 1310 37.6
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis HOM05D006356 ORTHO05D007903 2.2e-223 780.4 1182 39.6
Pp3c8_3890 Physcomitrium patens HOM05D006356 ORTHO05D007903 6.5e-220 768.8 1147 39.7
SEGI_10512 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 4.4e-208 729.6 802 51.0
CBR_g230 Chara braunii HOM05D006356 ORTHO05D007903 6.2e-154 549.7 1482 30.6
unitig_736.g22669 Utricularia gibba HOM05D006356 ORTHO05D007903 6.2e-154 549.7 457 63.9
arahy.Tifrunner.gnm1.ann1.1A0WRJ Arachis hypogaea HOM05D006356 ORTHO05D007903 1.2e-125 455.7 378 59.3
Cpa.g.sc1.372 Carica papaya HOM05D006356 ORTHO05D007903 1.8e-121 441.8 352 63.9
MCO05G525 Micromonas commoda HOM05D006356 ORTHO05D007903 1.4e-92 345.9 1353 27.2
Cre08.g372500 Chlamydomonas reinhardtii HOM05D006356 ORTHO05D007903 2.0e-88 332.0 1539 25.1
Actinidia02967 Actinidia chinensis HOM05D006356 ORTHO05D007903 3.4e-83 314.7 315 56.2
Nn4g26017 Nelumbo nucifera HOM05D006356 ORTHO05D007903 4.9e-74 284.3 255 54.1
TAR225G0003 Trochodendron aralioides HOM05D002467 ORTHO05D003907 5.6e-62 244.2 1265 24.9
Hma1.2p1_0529F.1_g173120 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 8.0e-61 240.4 196 65.8
Psat2g034240 Pisum sativum HOM05D006356 ORTHO05D007903 1.7e-58 232.6 306 40.8
PRCOL_00001522 Prasinoderma coloniale HOM05D006356 ORTHO05D007903 8.3e-50 203.8 1353 24.2
Hma1.2p1_0248F.1_g102020 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 1.1e-46 193.4 167 63.5
Psat0s3149g0040 Pisum sativum HOM05D006356 ORTHO05D007903 4.2e-41 174.9 236 39.8
Psat6g224200 Pisum sativum HOM05D006356 ORTHO05D007903 2.3e-39 169.1 129 69.8
Psat0s3149g0080 Pisum sativum HOM05D006356 ORTHO05D007903 1.5e-38 166.4 258 37.2
Psat0s4636g0040 Pisum sativum HOM05D006356 ORTHO05D007903 1.2e-35 156.8 120 69.2
Lj5g0016728 Lotus japonicus HOM05D006356 ORTHO05D007903 1.3e-26 126.7 137 52.6
AUR62038375 Chenopodium quinoa HOM05D006356 ORTHO05D007903 1.1e-25 123.6 135 51.9


User provided reference genes

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