Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00611 Striga asiatica HOM05D003682 ORTHO05D004224 0.0e+00 1176.0 679 100.0
Migut.D00421 Erythranthe guttata HOM05D003682 ORTHO05D004224 2.2e-240 835.9 695 73.4
Oeu060952.2 Olea europaea HOM05D003682 ORTHO05D004224 1.1e-205 720.7 692 64.7
Oeu025829.1 Olea europaea HOM05D003682 ORTHO05D004224 3.5e-185 652.5 632 65.5
PGSC0003DMG400009355 Solanum tuberosum HOM05D003682 ORTHO05D004224 1.5e-183 647.1 702 61.8
Nitab4.5_0000131g0160 Nicotiana tabacum HOM05D003682 ORTHO05D004224 9.9e-180 634.4 695 57.4
Solyc04g076430.3 Solanum lycopersicum HOM05D003682 ORTHO05D004224 8.4e-179 631.3 702 58.7
CAN.G475.14 Capsicum annuum HOM05D003682 ORTHO05D004224 1.4e-178 630.6 698 60.6
Lj4A589T43 Lonicera japonica HOM05D003682 ORTHO05D004224 7.1e-178 628.2 696 57.9
Sopen04g030190 Solanum pennellii HOM05D003682 ORTHO05D004224 6.0e-177 625.2 702 61.8
Lj4A600T32 Lonicera japonica HOM05D003682 ORTHO05D004224 1.9e-175 620.2 696 54.3
Lj4A739G25 Lonicera japonica HOM05D003682 ORTHO05D004224 5.6e-175 618.6 696 55.2
Nitab4.5_0006151g0030 Nicotiana tabacum HOM05D003682 ORTHO05D004224 1.3e-174 617.5 695 60.6
Cc10_g15970 Coffea canephora HOM05D003682 ORTHO05D004224 1.1e-170 604.4 689 57.9
Actinidia29628 Actinidia chinensis HOM05D003682 ORTHO05D004224 7.1e-170 601.7 698 56.3
Actinidia19624 Actinidia chinensis HOM05D003682 ORTHO05D004224 3.5e-169 599.4 698 56.6
vmacro04646 Vaccinium macrocarpon HOM05D003682 ORTHO05D004224 7.9e-169 598.2 701 53.9
Cfa003049 Carpinus fangiana HOM05D003682 ORTHO05D004224 3.7e-166 589.3 696 51.0
SalBow4G2331 Salvia bowleyana HOM05D003682 ORTHO05D004224 4.0e-165 585.9 514 68.9
Thecc.08G072000 Theobroma cacao HOM05D003682 ORTHO05D004224 5.3e-165 585.5 696 56.8
DCAR_019320 Daucus carota HOM05D003682 ORTHO05D004224 1.0e-163 581.3 696 56.2
Lsat_1_v5_gn_6_106460 Lactuca sativa HOM05D003682 ORTHO05D004224 1.4e-162 577.4 689 58.5
QL09p017991 Quercus lobata HOM05D003682 ORTHO05D004224 1.3e-160 570.9 697 56.5
Peaxi162Scf00454g00225 Petunia axillaris HOM05D003682 ORTHO05D004224 9.7e-159 564.7 698 50.7
Aqoxy5G01369 Aquilegia oxysepala HOM05D003682 ORTHO05D004224 5.3e-157 558.9 699 49.6
FAN18G1070 Fragaria x ananassa HOM05D003682 ORTHO05D004224 1.3e-155 554.3 696 53.9
CANSAT80G0637 Cannabis sativa HOM05D003682 ORTHO05D004224 8.5e-155 551.6 697 54.8
Gohir.A05G405400 Gossypium hirsutum HOM05D003682 ORTHO05D004224 5.5e-154 548.9 695 55.3
TAR381G0824 Trochodendron aralioides HOM05D003682 ORTHO05D004224 5.5e-154 548.9 700 56.7
Ciclev10000458m.g Citrus clementina HOM05D003682 ORTHO05D004224 7.2e-154 548.5 696 53.3
HanXRQChr10g0277791 Helianthus annuus HOM05D003682 ORTHO05D004224 1.6e-153 547.4 686 57.3
Haze_22471 Corylus avellana HOM05D003682 ORTHO05D004224 2.1e-153 547.0 696 54.7
Gorai.012G012000 Gossypium raimondii HOM05D003682 ORTHO05D004224 6.1e-153 545.4 696 55.5
Gohir.D04G010200 Gossypium hirsutum HOM05D003682 ORTHO05D004224 1.4e-152 544.3 696 55.5
Rhsim07G0212400 Rhododendron simsii HOM05D003682 ORTHO05D004224 1.4e-152 544.3 759 41.4
CiPaw.08G056300 Carya illinoinensis HOM05D003682 ORTHO05D004224 1.8e-152 543.9 694 54.0
FvH4_5g35190 Fragaria vesca HOM05D003682 ORTHO05D004224 2.3e-152 543.5 696 53.4
Gorai.010G034200 Gossypium raimondii HOM05D003682 ORTHO05D004224 3.0e-152 543.1 696 55.0
Gohir.D06G031000 Gossypium hirsutum HOM05D003682 ORTHO05D004224 8.8e-152 541.6 696 54.9
RcHm_v2.0_Chr7g0236311 Rosa chinensis HOM05D003682 ORTHO05D004224 2.5e-151 540.0 696 54.6
Gohir.A06G031900 Gossypium hirsutum HOM05D003682 ORTHO05D004224 5.7e-151 538.9 696 54.7
Manes.05G189900 Manihot esculenta HOM05D003682 ORTHO05D004224 2.2e-150 537.0 697 53.4
ECA246G3230 Erigeron canadensis HOM05D003682 ORTHO05D004224 2.8e-150 536.6 687 53.9
Duzib093G1710 Durio zibethinus HOM05D003682 ORTHO05D004224 1.8e-149 533.9 696 54.5
Dinv44868 Davidia involucrata HOM05D003682 ORTHO05D004224 4.1e-149 532.7 619 61.4
Ca_16009_v3 Cicer arietinum L. HOM05D003682 ORTHO05D004224 1.5e-148 530.8 698 50.6
TAR625G0645 Trochodendron aralioides HOM05D003682 ORTHO05D004224 2.0e-148 530.4 700 55.1
PSO782G3450 Papaver somniferum HOM05D003682 ORTHO05D004224 1.7e-147 527.3 699 47.9
Potri.006G225100 Populus trichocarpa HOM05D003682 ORTHO05D004224 2.2e-147 526.9 696 51.3
Sabra06G0174000 Salix brachista HOM05D003682 ORTHO05D004224 2.5e-146 523.5 696 51.9
FAN08G1971 Fragaria x ananassa HOM05D003682 ORTHO05D004224 2.1e-145 520.4 747 45.5
Lj1g0007093 Lotus japonicus HOM05D003682 ORTHO05D004224 2.3e-144 516.9 696 51.1
PSO170G3281 Papaver somniferum HOM05D003682 ORTHO05D004224 1.1e-143 514.6 699 47.9
PGR042G1797 Punica granatum HOM05D003682 ORTHO05D004224 2.6e-143 513.5 698 53.6
CsaV3_6G052200 Cucumis sativus L. HOM05D003682 ORTHO05D004224 4.4e-143 512.7 696 52.3
MBI16_g12477_MAGBIO Magnolia biondii HOM05D003682 ORTHO05D004224 7.4e-143 511.9 662 54.5
ClCG11G014620 Citrullus lanatus HOM05D003682 ORTHO05D004224 1.8e-141 507.3 709 50.8
Glyma.04G095800 Glycine max HOM05D003682 ORTHO05D004224 1.8e-141 507.3 699 52.6
MELO3C007092.2 Cucumis melo HOM05D003682 ORTHO05D004224 1.5e-140 504.2 726 51.0
Glyma.06G097500 Glycine max HOM05D003682 ORTHO05D004224 2.0e-140 503.8 699 52.8
Lalb_Chr17g0344591 Lupinus albus HOM05D003682 ORTHO05D004224 4.5e-140 502.7 697 52.4
arahy.Tifrunner.gnm1.ann1.6QC2QS Arachis hypogaea HOM05D003682 ORTHO05D004224 5.9e-140 502.3 700 53.0
TWI38G0994 Tripterygium wilfordii HOM05D003682 ORTHO05D004224 5.9e-140 502.3 706 48.6
FAN13G2001 Fragaria x ananassa HOM05D003682 ORTHO05D004224 7.7e-140 501.9 720 49.3
Prupe.1G533400 Prunus persica HOM05D003682 ORTHO05D004224 2.9e-139 500.0 695 53.2
arahy.Tifrunner.gnm1.ann1.X4VYGK Arachis hypogaea HOM05D003682 ORTHO05D004224 1.1e-138 498.0 700 52.1
Sed0002040 Sechium edule HOM05D003682 ORTHO05D004224 2.5e-138 496.9 697 51.4
Eucgr.F00427 Eucalyptus grandis HOM05D003682 ORTHO05D004224 1.6e-137 494.2 700 53.6
MD08G1200000 Malus domestica HOM05D003682 ORTHO05D004224 8.8e-136 488.4 695 47.3
EL10Ac6g13977 Beta vulgaris HOM05D003682 ORTHO05D004224 1.1e-135 488.0 736 47.3
Medtr3g100110 Medicago truncatula HOM05D003682 ORTHO05D004224 2.2e-134 483.8 714 47.2
Nn5g27243 Nelumbo nucifera HOM05D003682 ORTHO05D004224 3.7e-134 483.0 655 56.6
Sed0007462 Sechium edule HOM05D003682 ORTHO05D004224 1.1e-133 481.5 699 51.4
Phvul.009G036000 Phaseolus vulgaris HOM05D003682 ORTHO05D004224 5.3e-133 479.2 695 49.9
Sc26g0002240 Simmondsia chinensis HOM05D003682 ORTHO05D004224 9.1e-133 478.4 634 53.6
ATR0767G054 Amborella trichopoda HOM05D003682 ORTHO05D004224 2.6e-132 476.9 705 51.3
Aa31LG4G9590 Aethionema arabicum HOM05D003682 ORTHO05D004224 7.7e-132 475.3 698 52.1
Psat7g218480 Pisum sativum HOM05D003682 ORTHO05D004224 1.0e-131 474.9 695 50.5
AUR62042881 Chenopodium quinoa HOM05D003682 ORTHO05D004224 6.5e-131 472.2 697 48.6
BraA01t01520Z Brassica rapa HOM05D003682 ORTHO05D004224 1.1e-130 471.5 695 52.4
VMungo1309G2518 Vigna mungo HOM05D003682 ORTHO05D004224 3.2e-130 469.9 725 48.6
TPR.G6373 Trifolium pratense HOM05D003682 ORTHO05D004224 4.2e-130 469.5 695 47.3
THA.LOC104804716 Tarenaya hassleriana HOM05D003682 ORTHO05D000002 7.2e-130 468.8 694 53.2
Carub.0007s1658 Capsella rubella HOM05D003682 ORTHO05D004224 2.7e-129 466.8 701 49.2
A01p15860 Brassica napus HOM05D003682 ORTHO05D004224 1.4e-128 464.5 695 53.1
AL7G28730 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 5.2e-128 462.6 697 50.9
C07p53610 Brassica napus HOM05D003682 ORTHO05D004224 5.2e-128 462.6 696 50.0
BolC1t01908H Brassica oleracea HOM05D003682 ORTHO05D004224 5.2e-128 462.6 696 50.6
C01p19800 Brassica napus HOM05D003682 ORTHO05D004224 1.5e-127 461.1 696 50.6
BcaC06g32881 Brassica carinata HOM05D003682 ORTHO05D004224 3.4e-127 459.9 698 50.3
Sp7g22480 Schrenkiella parvula HOM05D003682 ORTHO05D004224 3.4e-127 459.9 696 50.9
Hund17277 Selenicereus undatus HOM05D003682 ORTHO05D004224 5.7e-127 459.1 683 52.4
AT4G24490 Arabidopsis thaliana HOM05D003682 ORTHO05D004224 7.5e-127 458.8 698 52.1
BolC7t45853H Brassica oleracea HOM05D003682 ORTHO05D004224 3.7e-126 456.4 698 49.4
A03p55320 Brassica napus HOM05D003682 ORTHO05D004224 4.8e-126 456.1 698 49.6
Thhalv10024594m.g Eutrema salsugineum HOM05D003682 ORTHO05D004224 6.3e-126 455.7 695 50.1
CARHR231880 Cardamine hirsuta HOM05D003682 ORTHO05D004224 8.3e-126 455.3 699 52.8
BraA03t14591Z Brassica rapa HOM05D003682 ORTHO05D004224 3.5e-124 449.9 702 49.7
Zm00001eb224710 Zea mays HOM05D003682 ORTHO05D004224 2.6e-119 433.7 695 42.4
HPP92_013453 Vanilla planifolia HOM05D003682 ORTHO05D004224 8.3e-118 428.7 702 41.5
Os06g0677500 Oryza sativa ssp. japonica HOM05D003682 ORTHO05D004224 1.6e-116 424.5 681 44.1
FAN04G1105 Fragaria x ananassa HOM05D003682 ORTHO05D004224 6.8e-112 409.1 698 37.7
Zm00001eb273870 Zea mays HOM05D003682 ORTHO05D004224 2.4e-109 400.6 697 40.5
SEGI_28473 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 7.0e-109 399.1 701 44.4
BcaC09g50863 Brassica carinata HOM05D003682 ORTHO05D004224 1.2e-108 398.3 573 51.3
CSS0003141 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 5.0e-107 392.9 513 48.1
AL3G20810 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 2.5e-106 390.6 706 41.8
CSS0030960 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 4.7e-105 386.3 517 52.2
CDE02G0915 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 4.9e-102 376.3 680 39.1
Carub.0003s1254 Capsella rubella HOM05D003682 ORTHO05D004224 4.1e-101 373.2 700 45.4
AUR62037113 Chenopodium quinoa HOM05D003682 ORTHO05D004224 1.1e-98 365.2 525 41.1
Atru.chr13.999 Acer truncatum HOM05D003682 ORTHO05D004224 5.6e-98 362.8 465 57.4
AL7G47420 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 1.4e-93 348.2 707 37.3
CDE01G0832 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 3.5e-92 343.6 625 49.0
AT5G41820 Arabidopsis thaliana HOM05D003682 ORTHO05D004224 7.8e-92 342.4 716 39.2
MD15G1387100 Malus domestica HOM05D003682 ORTHO05D004224 6.2e-89 332.8 544 46.5
SHI09562 Sapria himalayana HOM05D003682 ORTHO05D000023 6.4e-78 296.2 524 41.8
HanXRQChr08g0233491 Helianthus annuus HOM05D003682 ORTHO05D004224 1.2e-76 292.0 411 55.7
Prupe.1G572600 Prunus persica HOM05D003682 ORTHO05D004224 3.4e-71 273.9 463 42.1
Mapoly0151s0003 Marchantia polymorpha HOM05D003682 ORTHO05D004224 2.4e-69 267.7 706 42.2
SEGI_15297 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 3.2e-69 267.3 522 36.2
GSVIVG01009191001 Vitis vinifera HOM05D003682 ORTHO05D004224 1.6e-68 265.0 304 53.9
unitig_0.g155 Utricularia gibba HOM05D003682 ORTHO05D004224 1.4e-64 251.9 264 62.9
Lalb_Chr04g0252801 Lupinus albus HOM05D003682 ORTHO05D004224 2.3e-59 234.6 259 64.9
GSVIVG01009190001 Vitis vinifera HOM05D003682 ORTHO05D004224 2.1e-57 228.0 256 69.9
CSS0029858 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.4e-56 225.3 488 33.6
ECA232G1558 Erigeron canadensis HOM05D003682 ORTHO05D004224 5.3e-56 223.4 243 58.4
CSS0013415 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.2e-55 222.2 477 34.0
Glyma.02G123302 Glycine max HOM05D003682 ORTHO05D004224 3.4e-55 220.7 347 38.3
SEGI_17476 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 5.5e-53 213.4 420 34.5
CBR_g19613 Chara braunii HOM05D003682 ORTHO05D004224 4.5e-47 193.7 728 30.2
SalBow4G1793 Salvia bowleyana HOM05D003682 ORTHO05D004224 8.4e-46 189.5 180 69.4
COL.COLO4_35257 Corchorus olitorius HOM05D003682 ORTHO05D004224 6.3e-41 173.3 126 67.5
AagrBONN_evm.TU.Sc2ySwM_117.1254 Anthoceros agrestis HOM05D003682 ORTHO05D004224 2.6e-39 167.9 273 36.3
Cpa.g.c39765 Carica papaya HOM05D003682 ORTHO05D004224 3.4e-39 167.5 199 47.2
Pp3c1_10430 Physcomitrium patens HOM05D003682 ORTHO05D004224 5.5e-37 160.2 508 30.5
unitig_0.g156 Utricularia gibba HOM05D003682 ORTHO05D004224 2.7e-36 157.9 109 71.6
BcaNung04806 Brassica carinata HOM05D003682 ORTHO05D004224 1.5e-34 152.1 124 60.5
SEGI_24080 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 1.4e-29 135.6 126 54.8
Actinidia36899 Actinidia chinensis HOM05D003682 ORTHO05D004224 1.9e-29 135.2 136 64.0
Cpa.g.c34457.1 Carica papaya HOM05D003682 ORTHO05D004224 1.6e-28 132.1 134 57.5
HanXRQChr08g0233481 Helianthus annuus HOM05D003682 ORTHO05D004224 1.6e-28 132.1 139 64.0
SHI09561 Sapria himalayana HOM05D000105 ORTHO05D000023 2.1e-28 131.7 124 55.6
HPP92_013470 Vanilla planifolia HOM05D003682 ORTHO05D004224 6.1e-28 130.2 214 50.9
CSS0023594 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.4e-24 119.0 98 62.2
SMO307G0051 Selaginella moellendorffii HOM05D003682 ORTHO05D004224 2.4e-24 118.2 126 48.4
Dinv42603 Davidia involucrata HOM05D003682 ORTHO05D004224 9.1e-24 116.3 128 46.1
CSS0005132 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 4.5e-23 114.0 97 60.8
BcaB06g27567 Brassica carinata HOM05D003682 ORTHO05D004224 1.5e-21 109.0 116 50.9
EL10Ac3g05976 Beta vulgaris HOM05D003682 ORTHO05D004224 5.2e-19 100.5 71 62.0
BcaNung05639 Brassica carinata HOM05D006679 ORTHO05D008461 1.1e-16 92.8 134 38.1
Aqoxy2G00859 Aquilegia oxysepala HOM05D003682 ORTHO05D004224 1.5e-13 82.4 83 45.8
MCO12G062 Micromonas commoda HOM05D003682 ORTHO05D004224 1.9e-13 82.0 292 29.1
Psat5g049320 Pisum sativum HOM05D003682 ORTHO05D004224 1.9e-13 82.0 161 34.2
CSS0029499 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 5.5e-13 80.5 57 66.7
CSS0029631 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.2e-12 79.3 57 64.9
CSS0045772 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.2e-12 79.3 57 64.9
CSS0020196 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 8.0e-12 76.6 57 64.9
CSS0037747 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 8.0e-12 76.6 57 64.9
Cre07.g339350 Chlamydomonas reinhardtii HOM05D003682 ORTHO05D004224 1.0e-11 76.3 126 35.7
CSS0037736 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.4e-11 75.9 57 63.2
CSS0014234 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.3e-11 75.1 85 42.4
PRCOL_00003254 Prasinoderma coloniale HOM05D003682 ORTHO05D004224 1.2e-10 72.8 263 25.5
Lsat_1_v5_gn_3_58200 Lactuca sativa HOM05D003682 ORTHO05D004224 2.0e-10 72.0 76 52.6
CSS0003380 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.7e-09 68.9 85 37.6
Lalb_Chr04g0252781 Lupinus albus HOM05D003682 ORTHO05D004224 3.7e-09 67.8 74 48.6
CSS0026243 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 8.3e-09 66.6 85 36.5
CSS0040590 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 8.3e-09 66.6 85 36.5
PGR102G2117 Punica granatum HOM05D003682 ORTHO05D004224 4.1e-08 64.3 268 25.0
TAR628G0387 Trochodendron aralioides HOM05D003682 ORTHO05D004224 9.1e-08 63.2 44 61.4
Ah.04g150940 Amaranthus hybridus HOM05D007488 ORTHO05D009461 2.0e-07 62.0 30 86.7
CAN.G475.12 Capsicum annuum HOM05D003682 ORTHO05D004224 2.7e-07 61.6 51 54.9
CSS0042448 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 4.5e-07 60.8 84 34.5
arahy.Tifrunner.gnm1.ann1.R6K80C Arachis hypogaea HOM05D003682 ORTHO05D004224 2.9e-06 58.2 137 36.5
arahy.Tifrunner.gnm1.ann1.H7L4UV Arachis hypogaea HOM05D003682 ORTHO05D004224 6.5e-06 57.0 138 35.5
Nn1g05594 Nelumbo nucifera HOM05D003682 ORTHO05D004224 6.5e-06 57.0 146 35.6


User provided reference genes

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