Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00037 Striga asiatica HOM05D005873 ORTHO05D007582 0.0e+00 1247.3 623 100.0
MSTRG.16147 Avicennia marina HOM05D005873 ORTHO05D007582 1.2e-283 979.5 711 71.6
Migut.M01045 Erythranthe guttata HOM05D005873 ORTHO05D007582 4.1e-281 971.1 705 70.1
SalBow8G4573 Salvia bowleyana HOM05D005873 ORTHO05D007582 7.0e-281 970.3 704 70.0
Oeu039925.1 Olea europaea HOM05D005873 ORTHO05D007582 9.5e-270 933.3 710 67.0
Solyc11g068930.3 Solanum lycopersicum HOM05D005873 ORTHO05D007582 2.2e-266 922.2 717 65.8
GSVIVG01021202001 Vitis vinifera HOM05D005873 ORTHO05D007582 6.4e-266 920.6 713 66.5
Dinv04615 Davidia involucrata HOM05D005873 ORTHO05D007582 5.4e-265 917.5 705 66.8
Sopen11g027640 Solanum pennellii HOM05D005873 ORTHO05D007582 1.6e-264 916.0 717 65.6
PGSC0003DMG400019634 Solanum tuberosum HOM05D005873 ORTHO05D007582 1.1e-262 909.8 716 64.9
CSS0049485 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 7.3e-262 907.1 704 66.9
CSS0045323 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 1.4e-260 902.9 704 66.8
CAN.G689.28 Capsicum annuum HOM05D005873 ORTHO05D007582 5.2e-260 901.0 715 65.0
Peaxi162Scf00010g03612 Petunia axillaris HOM05D005873 ORTHO05D007582 8.9e-260 900.2 707 65.1
Prupe.4G060100 Prunus persica HOM05D005873 ORTHO05D007582 2.0e-259 899.0 706 65.2
TAR627G0247 Trochodendron aralioides HOM05D005873 ORTHO05D007582 3.2e-257 891.7 705 64.4
Ciclev10014429m.g Citrus clementina HOM05D005873 ORTHO05D007582 1.2e-256 889.8 704 64.8
RcHm_v2.0_Chr5g0010641 Rosa chinensis HOM05D005873 ORTHO05D007582 1.2e-256 889.8 706 64.3
Gorai.009G163500 Gossypium raimondii HOM05D005873 ORTHO05D007582 1.6e-256 889.4 713 63.8
Duzib192G0329 Durio zibethinus HOM05D005873 ORTHO05D007582 1.3e-255 886.3 704 64.8
TWI38G0673 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 3.0e-255 885.2 705 64.4
Gohir.D05G158500 Gossypium hirsutum HOM05D005873 ORTHO05D007582 8.6e-255 883.6 713 63.5
MD10G1281000 Malus domestica HOM05D005873 ORTHO05D007582 1.9e-254 882.5 707 64.1
CANSAT35G0525 Cannabis sativa HOM05D005873 ORTHO05D007582 5.6e-254 880.9 715 63.1
Gohir.A05G155800 Gossypium hirsutum HOM05D005873 ORTHO05D007582 6.2e-253 877.5 705 63.5
Thecc.06G172000 Theobroma cacao HOM05D005873 ORTHO05D007582 6.2e-253 877.5 705 63.5
COL.COLO4_05490 Corchorus olitorius HOM05D005873 ORTHO05D007582 1.8e-252 875.9 705 63.0
FAN11G2228 Fragaria x ananassa HOM05D005873 ORTHO05D007582 3.1e-252 875.2 712 62.6
FvH4_3g07910 Fragaria vesca HOM05D005873 ORTHO05D007582 1.2e-251 873.2 712 62.4
MD05G1302300 Malus domestica HOM05D005873 ORTHO05D007582 1.2e-251 873.2 707 63.2
TWI63G0032 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 1.2e-251 873.2 707 63.4
Nn1g04384 Nelumbo nucifera HOM05D005873 ORTHO05D007582 3.4e-251 871.7 712 62.5
FAN21G0636 Fragaria x ananassa HOM05D005873 ORTHO05D007582 9.9e-251 870.2 706 62.2
FAN16G2124 Fragaria x ananassa HOM05D005873 ORTHO05D007582 4.1e-249 864.8 714 61.8
ECA236G1606 Erigeron canadensis HOM05D005873 ORTHO05D007582 7.1e-249 864.0 704 63.1
CiPaw.10G058200 Carya illinoinensis HOM05D005873 ORTHO05D007582 7.8e-248 860.5 705 62.3
Lalb_Chr03g0024111 Lupinus albus HOM05D005873 ORTHO05D007582 7.8e-248 860.5 708 61.9
DCAR_028009 Daucus carota HOM05D005873 ORTHO05D007582 3.0e-247 858.6 704 64.2
Nitab4.5_0003937g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 3.9e-247 858.2 737 61.3
Nn1g09089 Nelumbo nucifera HOM05D005873 ORTHO05D007582 9.6e-246 853.6 712 62.2
Eucgr.B01514 Eucalyptus grandis HOM05D005873 ORTHO05D007582 3.6e-245 851.7 711 60.9
Lj1C1193T7 Lonicera japonica HOM05D005873 ORTHO05D007582 4.7e-245 851.3 712 61.7
TPR.G8345 Trifolium pratense HOM05D005873 ORTHO05D007582 6.2e-245 850.9 707 61.7
Aqoxy4G00415 Aquilegia oxysepala HOM05D005873 ORTHO05D007582 1.1e-244 850.1 698 63.6
arahy.Tifrunner.gnm1.ann1.IZWY79 Arachis hypogaea HOM05D005873 ORTHO05D007582 1.4e-244 849.7 707 61.8
Cfa000601 Carpinus fangiana HOM05D005873 ORTHO05D007582 1.8e-244 849.4 714 60.5
Ca_21328_v3 Cicer arietinum L. HOM05D005873 ORTHO05D007582 3.1e-244 848.6 707 61.8
Lj3g0011702 Lotus japonicus HOM05D005873 ORTHO05D007582 3.4e-243 845.1 711 62.0
Sed0012124 Sechium edule HOM05D005873 ORTHO05D007582 3.4e-243 845.1 715 61.1
Sabra04G0036300 Salix brachista HOM05D005873 ORTHO05D007582 9.9e-243 843.6 707 61.7
Potri.004G055600 Populus trichocarpa HOM05D005873 ORTHO05D007582 1.7e-242 842.8 707 61.7
PGR004G0809 Punica granatum HOM05D005873 ORTHO05D007582 1.7e-242 842.8 715 60.8
Rhsim13G0191000 Rhododendron simsii HOM05D005873 ORTHO05D007582 2.9e-242 842.0 727 60.4
VMungo1127G0781 Vigna mungo HOM05D005873 ORTHO05D007582 3.8e-242 841.6 707 61.7
Lsat_1_v5_gn_7_23000 Lactuca sativa HOM05D005873 ORTHO05D007582 4.9e-242 841.3 711 62.2
Glyma.12G010000 Glycine max HOM05D005873 ORTHO05D007582 5.4e-241 837.8 705 61.4
arahy.Tifrunner.gnm1.ann1.6H0VZY Arachis hypogaea HOM05D005873 ORTHO05D007582 6.6e-239 830.9 715 60.1
Phvul.011G010700 Phaseolus vulgaris HOM05D005873 ORTHO05D007582 6.6e-239 830.9 707 60.8
ClCG01G023710 Citrullus lanatus HOM05D005873 ORTHO05D007582 1.5e-238 829.7 706 60.8
Nitab4.5_0000158g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 3.3e-238 828.6 670 63.9
MELO3C007214.2 Cucumis melo HOM05D005873 ORTHO05D007582 7.3e-238 827.4 749 58.7
HanXRQChr13g0397371 Helianthus annuus HOM05D005873 ORTHO05D007582 4.8e-237 824.7 711 60.5
QL05p046535 Quercus lobata HOM05D005873 ORTHO05D007582 4.8e-237 824.7 798 55.4
Medtr0003s0540 Medicago truncatula HOM05D005873 ORTHO05D007582 1.4e-236 823.2 707 60.3
HanXRQChr05g0156521 Helianthus annuus HOM05D005873 ORTHO05D007582 6.9e-236 820.8 712 60.3
Aa31LG9G7130 Aethionema arabicum HOM05D005873 ORTHO05D007582 2.6e-235 818.9 701 59.9
Psat7g197320 Pisum sativum HOM05D005873 ORTHO05D007582 3.4e-235 818.5 673 62.6
CsaV3_6G050860 Cucumis sativus L. HOM05D005873 ORTHO05D007582 7.6e-235 817.4 707 60.4
FAN25G0256 Fragaria x ananassa HOM05D005873 ORTHO05D007582 7.6e-235 817.4 722 59.1
A02p29440 Brassica napus HOM05D005873 ORTHO05D007582 9.9e-235 817.0 700 61.1
C02p46710 Brassica napus HOM05D005873 ORTHO05D007582 9.9e-235 817.0 706 60.8
BraA02t07971Z Brassica rapa HOM05D005873 ORTHO05D007582 3.8e-234 815.1 700 61.0
Thhalv10000804m.g Eutrema salsugineum HOM05D005873 ORTHO05D007582 1.4e-233 813.1 704 59.9
CARHR176060 Cardamine hirsuta HOM05D005873 ORTHO05D007582 4.2e-233 811.6 698 60.3
Sp2g10820 Schrenkiella parvula HOM05D005873 ORTHO05D007582 9.3e-233 810.4 700 60.6
BolC2t10723H Brassica oleracea HOM05D005873 ORTHO05D007582 1.2e-232 810.1 707 60.5
BcaC03g16799 Brassica carinata HOM05D005873 ORTHO05D007582 1.6e-232 809.7 703 60.7
PSO541G6035 Papaver somniferum HOM05D005873 ORTHO05D007582 2.1e-232 809.3 705 60.7
AL8G12650 Arabidopsis lyrata HOM05D005873 ORTHO05D007582 3.5e-232 808.5 699 59.9
THA.LOC104806153 Tarenaya hassleriana HOM05D005873 ORTHO05D007582 4.6e-232 808.1 713 58.3
PSO675G7532 Papaver somniferum HOM05D005873 ORTHO05D007582 5.1e-231 804.7 705 60.3
AT5G45900 Arabidopsis thaliana HOM05D005873 ORTHO05D007582 8.7e-231 803.9 699 59.7
AUR62036593 Chenopodium quinoa HOM05D005873 ORTHO05D007582 1.5e-227 793.1 687 59.7
EL10Ac8g20512 Beta vulgaris HOM05D005873 ORTHO05D007582 1.0e-223 780.4 779 53.9
Cc11_g13830 Coffea canephora HOM05D005873 ORTHO05D007582 1.2e-219 766.9 712 56.6
MBI06_g25992_MAGBIO Magnolia biondii HOM05D005873 ORTHO05D007582 9.3e-217 757.3 699 57.9
ATR0733G019 Amborella trichopoda HOM05D005873 ORTHO05D007582 1.2e-216 756.9 702 57.0
Hund21181 Selenicereus undatus HOM05D005873 ORTHO05D007582 1.8e-215 753.1 767 54.1
Sc17g0005780 Simmondsia chinensis HOM05D005873 ORTHO05D007582 1.2e-208 730.3 594 63.6
Ah.14g087180 Amaranthus hybridus HOM05D005873 ORTHO05D007582 2.7e-208 729.2 705 55.3
AUR62031177 Chenopodium quinoa HOM05D005873 ORTHO05D007582 6.3e-205 718.0 712 54.5
Atru.chr10.1680 Acer truncatum HOM05D005873 ORTHO05D007582 4.5e-203 711.8 586 61.8
Carub.0008s0205 Capsella rubella HOM05D005873 ORTHO05D007582 1.7e-202 709.9 672 55.4
Dinv40666 Davidia involucrata HOM05D005873 ORTHO05D007582 3.8e-202 708.8 563 65.5
SEGI_08778 Sequoiadendron giganteum HOM05D005873 ORTHO05D007582 2.5e-198 696.0 708 53.4
vmacro01547 Vaccinium macrocarpon HOM05D005873 ORTHO05D007582 2.5e-198 696.0 689 56.5
AagrBONN_evm.TU.Sc2ySwM_117.2340 Anthoceros agrestis HOM05D005873 ORTHO05D007582 1.7e-170 603.6 694 47.3
Manes.17G054900 Manihot esculenta HOM05D005873 ORTHO05D007582 5.0e-170 602.1 549 58.8
CSS0029481 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 1.8e-167 593.6 707 50.2
Pp3c24_8100 Physcomitrium patens HOM05D005873 ORTHO05D007582 1.0e-159 567.8 694 45.7
Cpa.g.sc7.54 Carica papaya HOM05D005873 ORTHO05D007582 2.9e-157 559.7 524 57.8
SMO367G0884 Selaginella moellendorffii HOM05D005873 ORTHO05D007582 1.9e-148 530.4 691 42.8
CBR_g39927 Chara braunii HOM05D005873 ORTHO05D007582 1.5e-137 494.2 872 36.9
Os01g0614900 Oryza sativa ssp. japonica HOM05D005873 ORTHO05D007582 7.6e-134 481.9 685 41.6
Haze_06243 Corylus avellana HOM05D005873 ORTHO05D007582 1.6e-131 474.2 382 62.3
CBR_g50802 Chara braunii HOM05D005873 ORTHO05D007582 5.2e-127 459.1 837 36.4
Mapoly0015s0071 Marchantia polymorpha HOM05D005873 ORTHO05D007582 9.3e-116 421.8 486 46.7
Eucgr.B01507 Eucalyptus grandis HOM05D005873 ORTHO05D007582 4.6e-115 419.5 448 51.6
MCO13G516 Micromonas commoda HOM05D005873 ORTHO05D007582 7.4e-113 412.1 742 36.9
PRCOL_00005698 Prasinoderma coloniale HOM05D005873 ORTHO05D007582 9.6e-105 385.2 728 36.3
Actinidia16800 Actinidia chinensis HOM05D005873 ORTHO05D007582 3.4e-94 350.1 280 66.8
Cfa025052 Carpinus fangiana HOM05D005873 ORTHO05D007582 3.6e-91 340.1 748 33.8
Cre03.g165215 Chlamydomonas reinhardtii HOM05D005873 ORTHO05D007582 2.2e-88 330.9 812 32.1
Haze_26854 Corylus avellana HOM05D005873 ORTHO05D007582 2.2e-88 330.9 722 32.3
Zm00001eb358160 Zea mays HOM05D005873 ORTHO05D007582 6.9e-87 325.9 357 50.4
CDE08G0418 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 2.7e-83 313.9 302 57.6
CDE08G0836 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 1.0e-77 295.4 201 69.7
SHI28554 Sapria himalayana HOM05D005873 ORTHO05D007582 7.2e-76 289.3 270 54.8
unitig_0.g713 Utricularia gibba HOM05D005873 ORTHO05D007582 8.5e-69 265.8 194 68.6
CDE02G2814 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 1.8e-58 231.5 164 65.2
Haze_06244 Corylus avellana HOM05D005873 ORTHO05D007582 4.7e-35 153.7 112 65.2
SHI28562 Sapria himalayana HOM05D005873 ORTHO05D007582 8.9e-34 149.4 112 61.6
SHI28558 Sapria himalayana HOM05D005873 ORTHO05D050808 4.7e-27 127.1 96 62.5
Potri.011G065402 Populus trichocarpa HOM05D005873 ORTHO05D007582 1.2e-25 122.5 101 64.4
Lsat_1_v5_gn_1_96960 Lactuca sativa HOM05D001670 ORTHO05D002980 4.1e-23 114.0 182 41.2
Sabra11G0047200 Salix brachista HOM05D005873 ORTHO05D007582 5.6e-20 103.6 61 73.8
TPR.G23454 Trifolium pratense HOM05D001972 ORTHO05D002555 2.8e-19 101.3 268 30.6
Lsat_1_v5_gn_9_10320 Lactuca sativa HOM05D001670 ORTHO05D002980 6.8e-18 96.7 61 72.1
Oeu041773.1 Olea europaea HOM05D005873 ORTHO05D042378 2.6e-17 94.7 63 69.8
Lsat_1_v5_gn_4_5981 Lactuca sativa HOM05D005873 ORTHO05D002980 2.9e-16 91.3 59 71.2
Psat0s133g0080 Pisum sativum HOM05D005873 ORTHO05D007582 5.4e-15 87.0 177 36.7
SHI28555 Sapria himalayana HOM05D005873 ORTHO05D007582 1.7e-13 82.0 49 85.7
Cpa.g.c47463 Carica papaya HOM05D005873 ORTHO05D007582 9.6e-12 76.3 45 77.8
A06p46270 Brassica napus HOM05D005873 ORTHO05D042378 8.1e-11 73.2 69 49.3


User provided reference genes

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