Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold18G08253 Striga asiatica HOM05D005088 ORTHO05D006914 2.2e-65 252.3 138 100.0
Migut.H00031 Erythranthe guttata HOM05D005088 ORTHO05D006914 1.6e-44 183.0 131 79.4
SalBow8G2200 Salvia bowleyana HOM05D005088 ORTHO05D006914 3.7e-41 171.8 130 74.6
SalBow4G2808 Salvia bowleyana HOM05D005088 ORTHO05D006914 1.6e-39 166.4 90 88.9
TAR371G0548 Trochodendron aralioides HOM05D005088 ORTHO05D006914 2.7e-39 165.6 131 64.1
CSS0015220 Camellia sinensis var. sinensis HOM05D005088 ORTHO05D006914 1.3e-38 163.3 112 71.4
Nn2g12382 Nelumbo nucifera HOM05D005088 ORTHO05D006914 1.7e-38 162.9 130 62.3
ClCG09G019430 Citrullus lanatus HOM05D005088 ORTHO05D006914 2.2e-38 162.5 93 81.7
ECA236G2300 Erigeron canadensis HOM05D005088 ORTHO05D006914 2.2e-38 162.5 130 63.1
Manes.15G152700 Manihot esculenta HOM05D005088 ORTHO05D006914 2.2e-38 162.5 108 70.4
Aqoxy5G03675 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 2.9e-38 162.2 120 65.0
Actinidia05972 Actinidia chinensis HOM05D005088 ORTHO05D006914 5.0e-38 161.4 93 79.6
Oeu013966.1 Olea europaea HOM05D005088 ORTHO05D006914 5.0e-38 161.4 130 70.8
vmacro05886 Vaccinium macrocarpon HOM05D005088 ORTHO05D006914 6.5e-38 161.0 113 70.8
Hma1.2p1_0587F.1_g183900 Hydrangea macrophylla HOM05D005088 ORTHO05D006914 8.5e-38 160.6 132 62.9
GSVIVG01008659001 Vitis vinifera HOM05D005088 ORTHO05D006914 8.5e-38 160.6 130 70.0
Actinidia36135 Actinidia chinensis HOM05D005088 ORTHO05D006914 1.5e-37 159.8 92 80.4
Aqoxy7G00744 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 1.5e-37 159.8 121 63.6
Cc00_g04470 Coffea canephora HOM05D005088 ORTHO05D006914 1.5e-37 159.8 131 64.1
Sc14g0003070 Simmondsia chinensis HOM05D005088 ORTHO05D006914 1.5e-37 159.8 93 78.5
Ah.15g098720 Amaranthus hybridus HOM05D005088 ORTHO05D006914 1.9e-37 159.5 110 69.1
CsaV3_5G026950 Cucumis sativus L. HOM05D005088 ORTHO05D006914 1.9e-37 159.5 124 64.5
Lsat_1_v5_gn_7_9521 Lactuca sativa HOM05D005088 ORTHO05D006914 2.5e-37 159.1 130 61.5
MELO3C021598.2 Cucumis melo HOM05D005088 ORTHO05D006914 3.2e-37 158.7 93 79.6
unitig_748.g6973 Utricularia gibba HOM05D005088 ORTHO05D006914 5.5e-37 157.9 130 66.2
Thhalv10006186m.g Eutrema salsugineum HOM05D005088 ORTHO05D006914 9.4e-37 157.1 127 63.0
RhsimUnG0087300 Rhododendron simsii HOM05D005088 ORTHO05D006914 9.4e-37 157.1 90 81.1
TWI63G0383 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 9.4e-37 157.1 93 80.6
RhsimUnG0006300 Rhododendron simsii HOM05D005088 ORTHO05D006914 2.7e-36 155.6 90 80.0
HanXRQChr04g0122711 Helianthus annuus HOM05D005088 ORTHO05D006914 4.7e-36 154.8 132 62.1
Sp5g06120 Schrenkiella parvula HOM05D005088 ORTHO05D006914 1.0e-35 153.7 127 61.4
PGR142G2056 Punica granatum HOM05D005088 ORTHO05D006914 1.8e-35 152.9 128 58.6
EL10Ac6g15396 Beta vulgaris HOM05D005088 ORTHO05D006914 2.3e-35 152.5 82 85.4
Cpa.g.sc130.68 Carica papaya HOM05D005088 ORTHO05D006914 3.0e-35 152.1 93 75.3
CDE02G1254 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 3.0e-35 152.1 126 60.3
AT3G56510 Arabidopsis thaliana HOM05D005088 ORTHO05D006914 6.8e-35 151.0 127 60.6
CDE09G0918 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 8.8e-35 150.6 93 73.1
CARHR166630 Cardamine hirsuta HOM05D005088 ORTHO05D006914 1.2e-34 150.2 90 78.9
Carub.0005s2328 Capsella rubella HOM05D005088 ORTHO05D006914 1.5e-34 149.8 123 67.5
ATR1136G111 Amborella trichopoda HOM05D005088 ORTHO05D006914 2.0e-34 149.4 132 61.4
Sed0009164 Sechium edule HOM05D005088 ORTHO05D006914 2.6e-34 149.1 115 66.1
Aa31LG2G11590 Aethionema arabicum HOM05D005088 ORTHO05D006914 5.7e-34 147.9 123 60.2
Ciclev10015979m.g Citrus clementina HOM05D005088 ORTHO05D006914 5.7e-34 147.9 116 62.9
Lj7A602T41 Lonicera japonica HOM05D005088 ORTHO05D006914 5.7e-34 147.9 87 77.0
Peaxi162Scf00420g00135 Petunia axillaris HOM05D005088 ORTHO05D006914 5.7e-34 147.9 130 60.0
BcaNung07365 Brassica carinata HOM05D005088 ORTHO05D006914 9.8e-34 147.1 89 77.5
TWI73G1260 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 9.8e-34 147.1 138 56.5
DCAR_011267 Daucus carota HOM05D005088 ORTHO05D006914 1.3e-33 146.7 119 61.3
THA.LOC104820717 Tarenaya hassleriana HOM05D005088 ORTHO05D006914 1.7e-33 146.4 124 58.9
AL5G37860 Arabidopsis lyrata HOM05D005088 ORTHO05D006914 2.8e-33 145.6 92 72.8
A09p49430 Brassica napus HOM05D005088 ORTHO05D006914 2.8e-33 145.6 88 77.3
BraA09t40396Z Brassica rapa HOM05D005088 ORTHO05D006914 2.8e-33 145.6 88 77.3
BcaC07g39962 Brassica carinata HOM05D005088 ORTHO05D006914 1.1e-32 143.7 87 77.0
BolC8t50800H Brassica oleracea HOM05D005088 ORTHO05D006914 1.1e-32 143.7 87 77.0
CANSAT64G1390 Cannabis sativa HOM05D005088 ORTHO05D006914 1.1e-32 143.7 93 73.1
CANSAT64G2170 Cannabis sativa HOM05D005088 ORTHO05D006914 1.1e-32 143.7 93 73.1
CiPaw.03G046700 Carya illinoinensis HOM05D005088 ORTHO05D006914 1.1e-32 143.7 131 55.7
Nitab4.5_0001357g0120 Nicotiana tabacum HOM05D005088 ORTHO05D006914 1.1e-32 143.7 130 57.7
Nitab4.5_0001562g0080 Nicotiana tabacum HOM05D005088 ORTHO05D006914 1.4e-32 143.3 130 56.9
Nitab4.5_0006683g0110 Nicotiana tabacum HOM05D005088 ORTHO05D006914 5.4e-32 141.4 130 56.2
arahy.Tifrunner.gnm1.ann1.NQR6QW Arachis hypogaea HOM05D005088 ORTHO05D006914 7.0e-32 141.0 126 57.1
DCAR_001396 Daucus carota HOM05D005088 ORTHO05D006914 9.1e-32 140.6 137 52.6
Prupe.3G295300 Prunus persica HOM05D005088 ORTHO05D006914 1.6e-31 139.8 93 69.9
Haze_14769 Corylus avellana HOM05D005088 ORTHO05D006914 2.7e-31 139.0 92 68.5
arahy.Tifrunner.gnm1.ann1.XI631Y Arachis hypogaea HOM05D005088 ORTHO05D006914 3.5e-31 138.7 133 56.4
HPP92_010722 Vanilla planifolia HOM05D005088 ORTHO05D006914 3.5e-31 138.7 93 68.8
Nitab4.5_0006478g0030 Nicotiana tabacum HOM05D005088 ORTHO05D006914 5.9e-31 137.9 130 56.2
PSO063G5784 Papaver somniferum HOM05D005088 ORTHO05D006914 1.3e-30 136.7 92 69.6
Solyc10g008130.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 1.7e-30 136.3 89 70.8
Sopen10g004000 Solanum pennellii HOM05D005088 ORTHO05D006914 1.7e-30 136.3 89 70.8
PGSC0003DMG400021851 Solanum tuberosum HOM05D005088 ORTHO05D006914 1.7e-30 136.3 89 70.8
SEGI_26999 Sequoiadendron giganteum HOM05D005088 ORTHO05D006914 2.3e-30 136.0 116 59.5
PSO210G5838 Papaver somniferum HOM05D005088 ORTHO05D006914 3.8e-30 135.2 94 66.0
Atru.chr6.2443 Acer truncatum HOM05D005088 ORTHO05D006914 5.0e-30 134.8 92 69.6
PSO754G0075 Papaver somniferum HOM05D005088 ORTHO05D006914 5.0e-30 134.8 114 62.3
Sopen01g054060 Solanum pennellii HOM05D005088 ORTHO05D006914 8.6e-30 134.0 89 70.8
Lalb_Chr06g0174471 Lupinus albus HOM05D005088 ORTHO05D006914 1.1e-29 133.7 93 67.7
VMungo0464G1582 Vigna mungo HOM05D005088 ORTHO05D006914 9.5e-29 130.6 107 61.7
C08p31790 Brassica napus HOM05D005088 ORTHO05D006914 1.2e-28 130.2 111 60.4
PSO210G1672 Papaver somniferum HOM05D005088 ORTHO05D006914 1.6e-28 129.8 92 66.3
QL02p073814 Quercus lobata HOM05D005088 ORTHO05D006914 2.1e-28 129.4 93 65.6
Glyma.19G052200 Glycine max HOM05D005088 ORTHO05D006914 2.8e-28 129.0 108 66.7
Glyma.05G115100 Glycine max HOM05D005088 ORTHO05D006914 6.1e-28 127.9 108 65.7
arahy.Tifrunner.gnm1.ann1.NBA2EB Arachis hypogaea HOM05D005088 ORTHO05D006914 1.0e-27 127.1 84 69.0
MD17G1021200 Malus domestica HOM05D005088 ORTHO05D006914 1.0e-27 127.1 94 69.1
Psat1g081640 Pisum sativum HOM05D005088 ORTHO05D006914 1.4e-27 126.7 89 65.2
Lj4g0026117 Lotus japonicus HOM05D005088 ORTHO05D006914 1.8e-27 126.3 86 68.6
MD09G1021000 Malus domestica HOM05D005088 ORTHO05D006914 1.8e-27 126.3 94 68.1
Potri.001G341300 Populus trichocarpa HOM05D005088 ORTHO05D006914 1.8e-27 126.3 119 55.5
Phvul.004G060300 Phaseolus vulgaris HOM05D005088 ORTHO05D006914 2.3e-27 125.9 84 69.0
Dinv22813 Davidia involucrata HOM05D005088 ORTHO05D006914 3.0e-27 125.6 69 84.1
Sabra16G0221300 Salix brachista HOM05D005088 ORTHO05D006914 4.0e-27 125.2 119 54.6
Ciclev10017686m.g Citrus clementina HOM05D005088 ORTHO05D006914 6.8e-27 124.4 98 63.3
TAR629G1146 Trochodendron aralioides HOM05D005088 ORTHO05D006914 8.9e-27 124.0 132 54.5
Ca_04381_v3 Cicer arietinum L. HOM05D005088 ORTHO05D006914 1.5e-26 123.2 85 64.7
Medtr6g021760 Medicago truncatula HOM05D005088 ORTHO05D006914 1.5e-26 123.2 88 63.6
Thecc.04G021300 Theobroma cacao HOM05D005088 ORTHO05D006914 2.0e-26 122.9 94 63.8
Duzib147G1185 Durio zibethinus HOM05D005088 ORTHO05D006914 3.4e-26 122.1 117 58.1
Gohir.A07G224400 Gossypium hirsutum HOM05D005088 ORTHO05D006914 1.3e-25 120.2 135 57.8
Pp3c15_21890 Physcomitrium patens HOM05D005088 ORTHO05D006914 1.3e-25 120.2 84 65.5
Gorai.001G266900 Gossypium raimondii HOM05D005088 ORTHO05D006914 2.9e-25 119.0 135 56.3
PGSC0003DMG400018652 Solanum tuberosum HOM05D005088 ORTHO05D006914 3.7e-25 118.6 89 65.2
Mapoly0020s0128 Marchantia polymorpha HOM05D005088 ORTHO05D006914 4.9e-25 118.2 81 64.2
CBR_g229 Chara braunii HOM05D005088 ORTHO05D006914 8.3e-25 117.5 116 50.9
Gohir.D07G231700 Gossypium hirsutum HOM05D005088 ORTHO05D006914 1.8e-24 116.3 135 55.6
BcaNung07083 Brassica carinata HOM05D005088 ORTHO05D006914 7.0e-24 114.4 69 79.7
Os07g0662600 Oryza sativa ssp. japonica HOM05D005088 ORTHO05D006914 2.9e-22 109.0 128 46.9
Cre06.g264500 Chlamydomonas reinhardtii HOM05D005088 ORTHO05D006914 3.9e-22 108.6 95 52.6
HPP92_010645 Vanilla planifolia HOM05D005088 ORTHO05D006914 8.6e-22 107.5 69 69.6
MCO13G391 Micromonas commoda HOM05D005088 ORTHO05D006914 1.9e-21 106.3 93 55.9
PGSC0003DMG400010550 Solanum tuberosum HOM05D005088 ORTHO05D006914 1.9e-21 106.3 69 71.0
SHI10481 Sapria himalayana HOM05D005088 ORTHO05D006914 7.3e-21 104.4 107 56.1
RcHm_v2.0_Chr2g0173471 Rosa chinensis HOM05D005088 ORTHO05D006914 2.1e-20 102.8 81 58.0
FvH4_6g52000 Fragaria vesca HOM05D005088 ORTHO05D006914 2.8e-20 102.4 90 52.2
FAN02G1545 Fragaria x ananassa HOM05D005088 ORTHO05D006914 2.8e-20 102.4 90 52.2
FAN14G4588 Fragaria x ananassa HOM05D005088 ORTHO05D006914 2.8e-20 102.4 90 52.2
FAN05G1017 Fragaria x ananassa HOM05D005088 ORTHO05D006914 4.7e-20 101.7 90 52.2
Zm00001eb110920 Zea mays HOM05D005088 ORTHO05D006914 4.7e-20 101.7 128 45.3
PSO782G2229 Papaver somniferum HOM05D005088 ORTHO05D006914 1.4e-19 100.1 95 56.8
FAN09G0922 Fragaria x ananassa HOM05D005088 ORTHO05D006914 3.1e-19 99.0 90 51.1
Manes.17G110201 Manihot esculenta HOM05D005088 ORTHO05D006914 1.3e-17 93.6 52 82.7
MD09G1021200 Malus domestica HOM05D005088 ORTHO05D006914 9.2e-16 87.4 94 52.1
PRCOL_00000286 Prasinoderma coloniale HOM05D005088 ORTHO05D006914 2.3e-14 82.8 90 50.0
AUR62029179 Chenopodium quinoa HOM05D005088 ORTHO05D006914 1.5e-13 80.1 49 75.5
Psat5g064920 Pisum sativum HOM05D005088 ORTHO05D006914 3.3e-13 79.0 85 47.1
BcaB02g08365 Brassica carinata HOM05D005088 ORTHO05D006914 3.4e-10 68.9 47 68.1
TAR629G0436 Trochodendron aralioides HOM05D005088 ORTHO05D006914 2.9e-09 65.9 68 50.0
Solyc01g112010.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 1.1e-08 63.9 37 75.7
SMO347G0658 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 2.4e-08 62.8 45 62.2
Sc09g0007140 Simmondsia chinensis HOM05D005088 ORTHO05D389638 9.2e-08 60.8 48 60.4
COL.COLO4_29189 Corchorus olitorius HOM05D005088 ORTHO05D006914 3.9e-06 55.5 44 59.1


User provided reference genes

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