Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold186G40217 Striga asiatica HOM05D006308 ORTHO05D007820 9.1e-133 476.9 234 100.0
Migut.M01556 Erythranthe guttata HOM05D006308 ORTHO05D007820 5.8e-87 324.7 223 73.5
MSTRG.7060 Avicennia marina HOM05D006308 ORTHO05D007820 1.7e-86 323.2 222 73.9
SalBow8G4544 Salvia bowleyana HOM05D006308 ORTHO05D007820 2.0e-79 299.7 215 70.2
Nitab4.5_0001080g0030 Nicotiana tabacum HOM05D004008 ORTHO05D005383 2.2e-78 296.2 217 68.7
Peaxi162Scf00452g00832 Petunia axillaris HOM05D006308 ORTHO05D007820 1.3e-75 287.0 212 69.3
CSS0031885 Camellia sinensis var. sinensis HOM05D006308 ORTHO05D007820 3.0e-75 285.8 225 68.0
CSS0041769 Camellia sinensis var. sinensis HOM05D006308 ORTHO05D007820 3.0e-75 285.8 225 68.0
CAN.G943.39 Capsicum annuum HOM05D006308 ORTHO05D007820 8.7e-75 284.3 231 64.9
Nitab4.5_0001749g0010 Nicotiana tabacum HOM05D004008 ORTHO05D005383 1.5e-74 283.5 221 68.8
PGSC0003DMG400022127 Solanum tuberosum HOM05D006308 ORTHO05D007820 4.3e-74 282.0 222 64.9
Solyc07g066460.3 Solanum lycopersicum HOM05D006308 ORTHO05D007820 2.8e-73 279.3 164 79.9
Sopen07g034640 Solanum pennellii HOM05D006308 ORTHO05D007820 2.8e-73 279.3 164 79.9
Hma1.2p1_0334F.1_g128750 Hydrangea macrophylla HOM05D006308 ORTHO05D007820 4.5e-71 271.9 165 79.4
GSVIVG01020411001 Vitis vinifera HOM05D006308 ORTHO05D007820 4.5e-71 271.9 195 71.3
CiPaw.12G004900 Carya illinoinensis HOM05D006308 ORTHO05D007820 1.3e-70 270.4 223 64.6
Sed0010671 Sechium edule HOM05D006308 ORTHO05D007820 2.9e-70 269.2 187 71.7
unitig_46.g18521 Utricularia gibba HOM05D006308 ORTHO05D007820 2.9e-70 269.2 204 70.1
MELO3C016177.2 Cucumis melo HOM05D006308 ORTHO05D007820 6.4e-70 268.1 155 80.0
ClCG07G010660 Citrullus lanatus HOM05D006308 ORTHO05D007820 3.2e-69 265.8 155 80.0
FAN16G0301 Fragaria x ananassa HOM05D006308 ORTHO05D007820 3.2e-69 265.8 186 70.4
CsaV3_4G007640 Cucumis sativus L. HOM05D006308 ORTHO05D007820 4.2e-69 265.4 155 78.7
FAN21G3038 Fragaria x ananassa HOM05D006308 ORTHO05D007820 5.5e-69 265.0 186 69.9
arahy.Tifrunner.gnm1.ann1.1EF43V Arachis hypogaea HOM05D006308 ORTHO05D007820 7.1e-69 264.6 235 60.9
FvH4_3g15760 Fragaria vesca HOM05D006308 ORTHO05D007820 1.2e-68 263.8 186 69.4
FAN11G0128 Fragaria x ananassa HOM05D006308 ORTHO05D007820 2.7e-68 262.7 153 80.4
Atru.chr2.1759 Acer truncatum HOM05D006308 ORTHO05D007820 3.5e-68 262.3 154 79.9
MBI04_g08705_MAGBIO Magnolia biondii HOM05D006308 ORTHO05D007820 3.5e-68 262.3 157 79.0
Manes.14G016400 Manihot esculenta HOM05D006308 ORTHO05D007820 4.6e-68 261.9 154 81.8
Ciclev10021874m.g Citrus clementina HOM05D006308 ORTHO05D007820 6.0e-68 261.5 192 69.8
EL10Ac2g03321 Beta vulgaris HOM05D006308 ORTHO05D007820 7.9e-68 261.2 165 76.4
AUR62043126 Chenopodium quinoa HOM05D006308 ORTHO05D007820 1.0e-67 260.8 165 75.2
Eucgr.F01457 Eucalyptus grandis HOM05D006308 ORTHO05D007820 1.0e-67 260.8 153 81.0
Sc06g0001530 Simmondsia chinensis HOM05D006308 ORTHO05D007820 1.0e-67 260.8 166 72.9
Ah.16g106540 Amaranthus hybridus HOM05D006308 ORTHO05D007820 1.3e-67 260.4 165 74.5
QL08p064492 Quercus lobata HOM05D006308 ORTHO05D007820 1.3e-67 260.4 153 81.7
Sed0016869 Sechium edule HOM05D006308 ORTHO05D007820 3.0e-67 259.2 155 78.7
vmacro11665 Vaccinium macrocarpon HOM05D006308 ORTHO05D007820 3.9e-67 258.8 172 73.8
FAN25G0513 Fragaria x ananassa HOM05D006308 ORTHO05D007820 1.5e-66 256.9 153 79.1
RcHm_v2.0_Chr5g0026561 Rosa chinensis HOM05D006308 ORTHO05D007820 1.5e-66 256.9 153 79.7
Glyma.15G255800 Glycine max HOM05D006308 ORTHO05D007820 1.9e-66 256.5 228 59.6
ECA234G3728 Erigeron canadensis HOM05D006308 ORTHO05D007820 4.3e-66 255.4 164 73.8
HanXRQChr10g0305791 Helianthus annuus HOM05D006308 ORTHO05D007820 4.3e-66 255.4 165 73.3
MD10G1202500 Malus domestica HOM05D006308 ORTHO05D007820 4.3e-66 255.4 198 66.2
Phvul.005G057100 Phaseolus vulgaris HOM05D006308 ORTHO05D007820 4.3e-66 255.4 202 65.8
THA.LOC104822752 Tarenaya hassleriana HOM05D006308 ORTHO05D007820 4.3e-66 255.4 222 62.2
Aa31LG8G150 Aethionema arabicum HOM05D006308 ORTHO05D007820 5.6e-66 255.0 162 75.9
Psat1g011160 Pisum sativum HOM05D006308 ORTHO05D007820 5.6e-66 255.0 234 58.5
Potri.011G142900 Populus trichocarpa HOM05D006308 ORTHO05D007820 5.6e-66 255.0 154 79.9
AL3G24610 Arabidopsis lyrata HOM05D006308 ORTHO05D007820 7.4e-66 254.6 167 74.9
DCAR_016822 Daucus carota HOM05D006308 ORTHO05D007820 7.4e-66 254.6 199 66.3
Rhsim06G0239000 Rhododendron simsii HOM05D006308 ORTHO05D007820 7.4e-66 254.6 184 69.0
Gorai.009G355200 Gossypium raimondii HOM05D006308 ORTHO05D007820 1.3e-65 253.8 154 79.9
Gohir.A04G049000 Gossypium hirsutum HOM05D006308 ORTHO05D007820 1.6e-65 253.4 154 79.9
Thecc.07G152500 Theobroma cacao HOM05D006308 ORTHO05D007820 1.6e-65 253.4 155 78.7
Aqoxy5G00928 Aquilegia oxysepala HOM05D006308 ORTHO05D007820 2.8e-65 252.7 154 77.9
CARHR087450 Cardamine hirsuta HOM05D006308 ORTHO05D007820 3.7e-65 252.3 154 77.9
Lj3g0010937 Lotus japonicus HOM05D006308 ORTHO05D007820 3.7e-65 252.3 231 60.2
Lalb_Chr20g0108751 Lupinus albus HOM05D006308 ORTHO05D007820 3.7e-65 252.3 154 77.9
Nn6g31547 Nelumbo nucifera HOM05D006308 ORTHO05D007820 3.7e-65 252.3 155 78.1
COL.COLO4_07328 Corchorus olitorius HOM05D006308 ORTHO05D007820 4.8e-65 251.9 154 77.9
TWI39G0290 Tripterygium wilfordii HOM05D006308 ORTHO05D007820 4.8e-65 251.9 200 67.0
AT3G12930 Arabidopsis thaliana HOM05D006308 ORTHO05D007820 6.2e-65 251.5 154 77.9
Potri.001G458600 Populus trichocarpa HOM05D006308 ORTHO05D007820 8.1e-65 251.1 158 76.6
Sp3g11070 Schrenkiella parvula HOM05D006308 ORTHO05D007820 8.1e-65 251.1 218 60.6
Thhalv10021431m.g Eutrema salsugineum HOM05D006308 ORTHO05D007820 1.1e-64 250.8 154 77.3
CDE06G0902 Ceratophyllum demersum HOM05D006308 ORTHO05D007820 1.4e-64 250.4 152 78.9
CDE08G1673 Ceratophyllum demersum HOM05D006308 ORTHO05D007820 1.4e-64 250.4 162 74.1
Carub.0005s0924 Capsella rubella HOM05D006308 ORTHO05D007820 2.4e-64 249.6 224 59.4
Sabra16G0310800 Salix brachista HOM05D006308 ORTHO05D007820 2.4e-64 249.6 150 78.7
Gohir.D05G331300 Gossypium hirsutum HOM05D006308 ORTHO05D007820 3.1e-64 249.2 154 77.9
Glyma.08G172200 Glycine max HOM05D006308 ORTHO05D007820 4.0e-64 248.8 229 59.4
Prupe.4G139700 Prunus persica HOM05D006308 ORTHO05D007820 4.0e-64 248.8 195 66.2
CANSAT80G1356 Cannabis sativa HOM05D006308 ORTHO05D007820 5.3e-64 248.4 193 63.2
ATR0605G149 Amborella trichopoda HOM05D006308 ORTHO05D007820 6.9e-64 248.1 194 65.5
Duzib213G0994 Durio zibethinus HOM05D006308 ORTHO05D007820 6.9e-64 248.1 154 76.0
Lj1A905G40 Lonicera japonica HOM05D006308 ORTHO05D007820 1.2e-63 247.3 153 77.8
Medtr2g069470 Medicago truncatula HOM05D006308 ORTHO05D007820 1.5e-63 246.9 173 70.5
A01p40570 Brassica napus HOM05D006308 ORTHO05D007820 2.6e-63 246.1 154 74.0
C01p52210 Brassica napus HOM05D006308 ORTHO05D007820 2.6e-63 246.1 154 74.0
BolC1t05161H Brassica oleracea HOM05D006308 ORTHO05D007820 2.6e-63 246.1 154 74.0
BcaC09g48280 Brassica carinata HOM05D006308 ORTHO05D007820 5.8e-63 245.0 154 73.4
TPR.G9745 Trifolium pratense HOM05D006308 ORTHO05D007820 5.8e-63 245.0 209 62.7
Cc05_g16080 Coffea canephora HOM05D006308 ORTHO05D007820 1.0e-62 244.2 168 72.6
Ca_03675_v3 Cicer arietinum L. HOM05D006308 ORTHO05D007820 1.3e-62 243.8 173 69.9
arahy.Tifrunner.gnm1.ann1.HXV25C Arachis hypogaea HOM05D006308 ORTHO05D007820 2.9e-62 242.7 223 57.4
BraA01t04092Z Brassica rapa HOM05D006308 ORTHO05D007820 3.8e-62 242.3 154 73.4
Lsat_1_v5_gn_5_125241 Lactuca sativa HOM05D006308 ORTHO05D007820 3.8e-62 242.3 213 57.7
BraA05t22456Z Brassica rapa HOM05D006308 ORTHO05D007820 6.5e-62 241.5 154 72.7
A05p36560 Brassica napus HOM05D006308 ORTHO05D007820 8.4e-62 241.1 154 72.7
BolC5t34167H Brassica oleracea HOM05D006308 ORTHO05D007820 1.1e-61 240.7 154 72.1
PSO017G0504 Papaver somniferum HOM05D006308 ORTHO05D007820 1.4e-61 240.4 156 73.1
PSO170G1595 Papaver somniferum HOM05D006308 ORTHO05D007820 2.5e-61 239.6 156 72.4
PGR083G0385 Punica granatum HOM05D006308 ORTHO05D007820 7.9e-60 234.6 165 70.9
Sabra11G0127800 Salix brachista HOM05D006308 ORTHO05D007820 2.3e-59 233.0 192 63.5
HPP92_015477 Vanilla planifolia HOM05D006308 ORTHO05D007820 2.3e-59 233.0 147 75.5
Haze_08539 Corylus avellana HOM05D006308 ORTHO05D007820 3.0e-59 232.6 265 51.3
Oeu051665.1 Olea europaea HOM05D006308 ORTHO05D007820 6.7e-59 231.5 193 64.8
BcaC05g29223 Brassica carinata HOM05D006308 ORTHO05D007820 5.7e-58 228.4 145 72.4
C05p54980 Brassica napus HOM05D006308 ORTHO05D007820 1.6e-57 226.9 179 62.0
Dinv42509 Davidia involucrata HOM05D006308 ORTHO05D007820 8.2e-57 224.6 130 82.3
Hund12461 Selenicereus undatus HOM05D006308 ORTHO05D007820 1.4e-56 223.8 159 67.9
BcaB06g25499 Brassica carinata HOM05D006308 ORTHO05D007820 6.5e-54 214.9 203 54.2
Mapoly0031s0088 Marchantia polymorpha HOM05D006308 ORTHO05D007820 3.6e-52 209.1 151 66.2
SEGI_12516 Sequoiadendron giganteum HOM05D006308 ORTHO05D007820 1.8e-51 206.8 181 58.0
Os09g0493600 Oryza sativa ssp. japonica HOM05D006308 ORTHO05D007820 3.0e-51 206.1 156 64.1
TAR381G0490 Trochodendron aralioides HOM05D006308 ORTHO05D007820 3.3e-50 202.6 142 71.1
Pp3c9_2790 Physcomitrium patens HOM05D006308 ORTHO05D007820 4.3e-50 202.2 154 59.7
VMungo1080G0665 Vigna mungo HOM05D006308 ORTHO05D007820 4.8e-49 198.7 168 64.3
Actinidia12793 Actinidia chinensis HOM05D006308 ORTHO05D007820 1.5e-47 193.7 212 51.4
AagrBONN_evm.TU.Sc2ySwM_228.3592 Anthoceros agrestis HOM05D006308 ORTHO05D007820 2.7e-44 183.0 143 58.7
Manes.06G172000 Manihot esculenta HOM05D006308 ORTHO05D007820 1.2e-39 167.5 139 61.9
SMO367G0472 Selaginella moellendorffii HOM05D006308 ORTHO05D007820 7.7e-39 164.9 173 50.3
Actinidia07352 Actinidia chinensis HOM05D006308 ORTHO05D007820 2.2e-33 146.7 81 82.7
Nn3g19990 Nelumbo nucifera HOM05D006308 ORTHO05D007820 2.1e-28 130.2 134 53.0
Nn3g19991 Nelumbo nucifera HOM05D006308 ORTHO05D007820 2.1e-28 130.2 134 53.0
Nn3g18400 Nelumbo nucifera HOM05D006308 ORTHO05D007820 2.3e-27 126.7 85 74.1
Pp3c15_7010 Physcomitrium patens HOM05D006308 ORTHO05D007820 3.3e-26 122.9 114 49.1
A01p40580 Brassica napus HOM05D006308 ORTHO05D007820 7.7e-23 111.7 74 71.6
Cre03.g205600 Chlamydomonas reinhardtii HOM05D006308 ORTHO05D007820 1.0e-22 111.3 114 46.5
MCO04G467 Micromonas commoda HOM05D006308 ORTHO05D007820 2.9e-22 109.8 120 40.8
CAN.G337.145 Capsicum annuum HOM05D006308 ORTHO05D007820 1.5e-21 107.5 60 80.0
PRCOL_00002538 Prasinoderma coloniale HOM05D006308 ORTHO05D007820 1.4e-19 100.9 126 42.1
CBR_g48397 Chara braunii HOM05D006308 ORTHO05D007820 5.9e-15 85.5 82 51.2
Actinidia07353 Actinidia chinensis HOM05D006308 ORTHO05D007820 7.2e-13 78.6 100 49.0
Cpa.g.sc10.49 Carica papaya HOM05D006308 ORTHO05D007820 5.2e-11 72.4 42 78.6
AUR62039167 Chenopodium quinoa HOM05D007854 ORTHO05D138328 3.4e-10 69.7 36 86.1
Zm00001eb317050 Zea mays HOM05D006308 ORTHO05D007820 2.7e-07 60.1 71 43.7
arahy.Tifrunner.gnm1.ann1.QG9RQP Arachis hypogaea HOM05D030826 ORTHO05D023738 1.0e-06 58.2 42 61.9
Atru.chr11.2245 Acer truncatum HOM05D006725 ORTHO05D008223 6.6e-06 55.5 138 26.1
Atru.chr11.2260 Acer truncatum HOM05D006725 ORTHO05D008223 6.6e-06 55.5 138 26.1


User provided reference genes

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