Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold178G39483 Striga asiatica HOM05D000880 ORTHO05D007053 4.4e-74 281.2 139 100.0
SalBow3G0448 Salvia bowleyana HOM05D000880 ORTHO05D007053 1.1e-13 80.5 50 74.0
MSTRG.9184 Avicennia marina HOM05D000880 ORTHO05D007053 5.6e-13 78.2 50 70.0
CAN.G472.10 Capsicum annuum HOM05D000880 ORTHO05D007053 7.3e-13 77.8 50 72.0
Solyc09g075190.3 Solanum lycopersicum HOM05D000880 ORTHO05D007053 7.3e-13 77.8 50 72.0
Sopen09g030010 Solanum pennellii HOM05D000880 ORTHO05D007053 7.3e-13 77.8 50 72.0
Lalb_Chr21g0309241 Lupinus albus HOM05D000880 ORTHO05D007053 1.6e-12 76.6 50 70.0
Haze_04945 Corylus avellana HOM05D000880 ORTHO05D007053 2.1e-12 76.3 50 70.0
Peaxi162Scf00001g42030 Petunia axillaris HOM05D000880 ORTHO05D007053 2.1e-12 76.3 50 70.0
QL12p028391 Quercus lobata HOM05D000880 ORTHO05D007053 2.1e-12 76.3 50 70.0
Lalb_Chr02g0146401 Lupinus albus HOM05D000880 ORTHO05D007053 3.6e-12 75.5 50 68.0
Atru.chr5.1139 Acer truncatum HOM05D000880 ORTHO05D007053 4.8e-12 75.1 50 68.0
DCAR_018329 Daucus carota HOM05D000880 ORTHO05D007053 4.8e-12 75.1 50 68.0
Potri.014G128400 Populus trichocarpa HOM05D000880 ORTHO05D007053 4.8e-12 75.1 50 68.0
PGSC0003DMG400031813 Solanum tuberosum HOM05D000880 ORTHO05D007053 4.8e-12 75.1 50 70.0
vmacro02446 Vaccinium macrocarpon HOM05D000880 ORTHO05D007053 4.8e-12 75.1 50 70.0
Cfa005905 Carpinus fangiana HOM05D000880 ORTHO05D007053 6.2e-12 74.7 50 68.0
Migut.D00148 Erythranthe guttata HOM05D000880 ORTHO05D007053 6.2e-12 74.7 50 68.0
Glyma.02G017400 Glycine max HOM05D000880 ORTHO05D007053 6.2e-12 74.7 50 68.0
Glyma.10G017800 Glycine max HOM05D000880 ORTHO05D007053 6.2e-12 74.7 50 68.0
Manes.05G061800 Manihot esculenta HOM05D000880 ORTHO05D007053 6.2e-12 74.7 50 68.0
Phvul.007G147200 Phaseolus vulgaris HOM05D000880 ORTHO05D007053 6.2e-12 74.7 50 68.0
VMungo0720G1277 Vigna mungo HOM05D000880 ORTHO05D007053 6.2e-12 74.7 50 68.0
Ca_10329_v3 Cicer arietinum L. HOM05D000880 ORTHO05D007053 8.1e-12 74.3 50 68.0
Medtr1g088410 Medicago truncatula HOM05D000880 ORTHO05D007053 8.1e-12 74.3 50 68.0
Oeu054121.1 Olea europaea HOM05D000880 ORTHO05D007053 8.1e-12 74.3 50 68.0
TPR.G33956 Trifolium pratense HOM05D000880 ORTHO05D007053 8.1e-12 74.3 50 68.0
unitig_32.g10658 Utricularia gibba HOM05D000880 ORTHO05D007053 8.1e-12 74.3 50 68.0
CiPaw.08G094700 Carya illinoinensis HOM05D000880 ORTHO05D007053 1.1e-11 73.9 50 68.0
Nitab4.5_0001879g0170 Nicotiana tabacum HOM05D000880 ORTHO05D007053 1.4e-11 73.6 50 68.0
Nitab4.5_0002433g0080 Nicotiana tabacum HOM05D000880 ORTHO05D007053 1.4e-11 73.6 50 68.0
Rhsim13G0009800 Rhododendron simsii HOM05D000880 ORTHO05D007053 1.4e-11 73.6 50 68.0
AL5G34740 Arabidopsis lyrata HOM05D000880 ORTHO05D007053 1.8e-11 73.2 50 68.0
AT3G53760 Arabidopsis thaliana HOM05D000880 ORTHO05D007053 1.8e-11 73.2 50 68.0
Carub.0005s2034 Capsella rubella HOM05D000880 ORTHO05D007053 1.8e-11 73.2 50 68.0
Psat6g165160 Pisum sativum HOM05D000880 ORTHO05D007053 1.8e-11 73.2 50 66.0
THA.LOC104802176 Tarenaya hassleriana HOM05D000880 ORTHO05D007053 1.8e-11 73.2 50 68.0
Actinidia01490 Actinidia chinensis HOM05D000880 ORTHO05D007053 2.4e-11 72.8 50 66.0
Ciclev10018978m.g Citrus clementina HOM05D000880 ORTHO05D007053 2.4e-11 72.8 50 66.0
Dinv33058 Davidia involucrata HOM05D000880 ORTHO05D007053 2.4e-11 72.8 50 66.0
MD03G1288900 Malus domestica HOM05D000880 ORTHO05D007053 2.4e-11 72.8 50 66.0
Prupe.8G262200 Prunus persica HOM05D000880 ORTHO05D007053 2.4e-11 72.8 50 66.0
MBI14_g32928_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D007053 3.1e-11 72.4 52 65.4
Aa31LG10G9270 Aethionema arabicum HOM05D000880 ORTHO05D007053 4.0e-11 72.0 50 64.0
Cpa.g.sc9.255 Carica papaya HOM05D000880 ORTHO05D007053 4.0e-11 72.0 50 66.0
Cc01_g20910 Coffea canephora HOM05D000880 ORTHO05D007053 4.0e-11 72.0 50 66.0
Lj2A1196G43 Lonicera japonica HOM05D000880 ORTHO05D007053 4.0e-11 72.0 50 64.0
ATR0057G121 Amborella trichopoda HOM05D000880 ORTHO05D007053 5.3e-11 71.6 50 66.0
ECA236G1870 Erigeron canadensis HOM05D000880 ORTHO05D007053 5.3e-11 71.6 50 66.0
Thhalv10010145m.g Eutrema salsugineum HOM05D000880 ORTHO05D007053 5.3e-11 71.6 50 66.0
PGR044G2013 Punica granatum HOM05D000880 ORTHO05D007053 5.3e-11 71.6 50 66.0
Sp5g08620 Schrenkiella parvula HOM05D000880 ORTHO05D007053 5.3e-11 71.6 50 66.0
GSVIVG01028027001 Vitis vinifera HOM05D000880 ORTHO05D007053 5.3e-11 71.6 50 66.0
arahy.Tifrunner.gnm1.ann1.D5VDWJ Arachis hypogaea HOM05D000880 ORTHO05D007053 6.9e-11 71.2 46 69.6
arahy.Tifrunner.gnm1.ann1.JXQ8LX Arachis hypogaea HOM05D000880 ORTHO05D007053 6.9e-11 71.2 46 69.6
arahy.Tifrunner.gnm1.ann1.VZZJ8Q Arachis hypogaea HOM05D000880 ORTHO05D007053 6.9e-11 71.2 46 69.6
CARHR163650 Cardamine hirsuta HOM05D000880 ORTHO05D007053 6.9e-11 71.2 50 66.0
FvH4_2g25810 Fragaria vesca HOM05D000880 ORTHO05D007053 6.9e-11 71.2 50 64.0
FAN15G1023 Fragaria x ananassa HOM05D000880 ORTHO05D007053 6.9e-11 71.2 50 64.0
FAN20G0148 Fragaria x ananassa HOM05D000880 ORTHO05D007053 6.9e-11 71.2 50 64.0
FAN24G3174 Fragaria x ananassa HOM05D000880 ORTHO05D007053 6.9e-11 71.2 50 64.0
Gorai.007G127700 Gossypium raimondii HOM05D000880 ORTHO05D007053 6.9e-11 71.2 50 66.0
HanXRQChr04g0114151 Helianthus annuus HOM05D000880 ORTHO05D007053 6.9e-11 71.2 50 66.0
Hma1.2p1_0491F.1_g164650 Hydrangea macrophylla HOM05D000880 ORTHO05D007053 6.9e-11 71.2 58 56.9
RcHm_v2.0_Chr6g0294121 Rosa chinensis HOM05D000880 ORTHO05D007053 6.9e-11 71.2 50 64.0
COL.COLO4_23337 Corchorus olitorius HOM05D000880 ORTHO05D007053 9.0e-11 70.9 50 66.0
Dinv02562 Davidia involucrata HOM05D000880 ORTHO05D007053 9.0e-11 70.9 50 62.0
Lsat_1_v5_gn_8_164240 Lactuca sativa HOM05D000880 ORTHO05D007053 9.0e-11 70.9 50 66.0
BcaB01g00245 Brassica carinata HOM05D000880 ORTHO05D007053 1.2e-10 70.5 50 64.0
A09p46740 Brassica napus HOM05D000880 ORTHO05D007053 1.2e-10 70.5 50 64.0
BraA09t40136Z Brassica rapa HOM05D000880 ORTHO05D007053 1.2e-10 70.5 50 64.0
AUR62025574 Chenopodium quinoa HOM05D000880 ORTHO05D007053 1.2e-10 70.5 57 59.6
CSS0009761 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D007053 1.5e-10 70.1 50 64.0
Thecc.01G301400 Theobroma cacao HOM05D000880 ORTHO05D007053 1.5e-10 70.1 50 64.0
MELO3C015161.2 Cucumis melo HOM05D000880 ORTHO05D007053 2.0e-10 69.7 51 60.8
ClCG03G013010 Citrullus lanatus HOM05D000880 ORTHO05D007053 2.6e-10 69.3 50 62.0
MELO3C026912.2 Cucumis melo HOM05D000880 ORTHO05D007053 2.6e-10 69.3 50 62.0
CsaV3_1G043050 Cucumis sativus L. HOM05D000880 ORTHO05D007053 2.6e-10 69.3 50 62.0
Gohir.A11G114100 Gossypium hirsutum HOM05D000880 ORTHO05D007053 2.6e-10 69.3 50 64.0
Sed0026689 Sechium edule HOM05D000880 ORTHO05D007053 2.6e-10 69.3 50 62.0
Hund05431 Selenicereus undatus HOM05D000880 ORTHO05D007053 2.6e-10 69.3 50 68.0
TWI59G0706 Tripterygium wilfordii HOM05D000880 ORTHO05D007053 2.6e-10 69.3 50 62.0
Os05g0154500 Oryza sativa ssp. japonica HOM05D000880 ORTHO05D007053 3.4e-10 68.9 50 62.0
HanXRQChr10g0285011 Helianthus annuus HOM05D000880 ORTHO05D007053 4.4e-10 68.6 50 64.0
Sc05g0003770 Simmondsia chinensis HOM05D000880 ORTHO05D007053 4.4e-10 68.6 50 66.0
TAR365G0367 Trochodendron aralioides HOM05D000880 ORTHO05D007053 4.4e-10 68.6 50 64.0
Eucgr.K03489 Eucalyptus grandis HOM05D000880 ORTHO05D007053 5.8e-10 68.2 50 66.0
BcaB01g00241 Brassica carinata HOM05D000880 ORTHO05D007053 7.6e-10 67.8 50 62.0
BcaC07g39735 Brassica carinata HOM05D000880 ORTHO05D007053 7.6e-10 67.8 50 62.0
C08p29070 Brassica napus HOM05D000880 ORTHO05D007053 7.6e-10 67.8 50 62.0
BolC8t50508H Brassica oleracea HOM05D000880 ORTHO05D007053 7.6e-10 67.8 50 62.0
Lj5g0001867 Lotus japonicus HOM05D000880 ORTHO05D007053 7.6e-10 67.8 51 64.7
CDE01G0629 Ceratophyllum demersum HOM05D000880 ORTHO05D007053 9.9e-10 67.4 50 62.0
Gorai.004G090500 Gossypium raimondii HOM05D000880 ORTHO05D007053 9.9e-10 67.4 50 64.0
SHI15144 Sapria himalayana HOM05D000880 ORTHO05D007053 9.9e-10 67.4 50 64.0
Zm00001eb282720 Zea mays HOM05D000880 ORTHO05D007053 2.2e-09 66.2 50 58.0
ECA247G4025 Erigeron canadensis HOM05D000880 ORTHO05D007053 2.9e-09 65.9 50 64.0
Ah.15g093160 Amaranthus hybridus HOM05D000880 ORTHO05D007053 3.8e-09 65.5 50 64.0
AUR62008670 Chenopodium quinoa HOM05D000880 ORTHO05D007053 3.8e-09 65.5 46 67.4
EL10Ac7g17514 Beta vulgaris HOM05D000880 ORTHO05D007053 4.9e-09 65.1 46 65.2
PSO339G1812 Papaver somniferum HOM05D000880 ORTHO05D007053 6.4e-09 64.7 50 62.0
PSO384G2678 Papaver somniferum HOM05D000880 ORTHO05D007053 6.4e-09 64.7 50 62.0
PGR044G2165 Punica granatum HOM05D000009 ORTHO05D000008 6.4e-09 64.7 57 59.6
Gohir.A08G076500 Gossypium hirsutum HOM05D000880 ORTHO05D007053 8.4e-09 64.3 50 60.0
Aqoxy2G02934 Aquilegia oxysepala HOM05D000880 ORTHO05D007053 1.9e-08 63.2 50 64.0
HPP92_007056 Vanilla planifolia HOM05D000880 ORTHO05D007053 3.2e-08 62.4 76 47.4
Lsat_1_v5_gn_9_43261 Lactuca sativa HOM05D000880 ORTHO05D007053 4.2e-08 62.0 53 56.6
Lj5g0006803 Lotus japonicus HOM05D000880 ORTHO05D007053 4.2e-08 62.0 66 51.5
SGA_v2.0_scaffold1G00361 Striga asiatica HOM05D000880 ORTHO05D007053 1.6e-07 60.1 45 62.2
Mapoly0009s0235 Marchantia polymorpha HOM05D000880 ORTHO05D007053 1.3e-06 57.0 50 58.0
AagrBONN_evm.TU.Sc2ySwM_117.410 Anthoceros agrestis HOM05D000880 ORTHO05D007053 3.0e-06 55.8 50 58.0
CBR_g8601 Chara braunii HOM05D000880 ORTHO05D007053 3.9e-06 55.5 53 50.9


User provided reference genes

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