Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold16G07839 Striga asiatica HOM05D002112 ORTHO05D005830 5.7e-278 960.3 494 100.0
Migut.M02025 Erythranthe guttata HOM05D002112 ORTHO05D005830 2.4e-151 539.7 497 63.4
Dinv17874 Davidia involucrata HOM05D002112 ORTHO05D005830 1.3e-141 507.3 494 57.9
SalBow5G0693 Salvia bowleyana HOM05D002112 ORTHO05D005830 2.3e-141 506.5 495 58.8
Atru.chr4.1269 Acer truncatum HOM05D002112 ORTHO05D005830 5.1e-141 505.4 494 58.1
Haze_01451 Corylus avellana HOM05D002112 ORTHO05D005830 1.1e-138 497.7 495 57.0
Lj2A342T117 Lonicera japonica HOM05D002112 ORTHO05D005830 3.4e-137 492.7 496 55.6
GSVIVG01010853001 Vitis vinifera HOM05D002112 ORTHO05D005830 7.6e-137 491.5 494 56.3
CiPaw.01G095700 Carya illinoinensis HOM05D002112 ORTHO05D005830 2.9e-136 489.6 494 56.1
RcHm_v2.0_Chr2g0118821 Rosa chinensis HOM05D002112 ORTHO05D005830 1.1e-135 487.6 496 57.5
QL10p051275 Quercus lobata HOM05D002112 ORTHO05D005830 4.1e-135 485.7 493 55.8
Sabra17G0000800 Salix brachista HOM05D002112 ORTHO05D005830 5.4e-135 485.3 495 56.0
THA.LOC104817851 Tarenaya hassleriana HOM05D002112 ORTHO05D005830 5.4e-135 485.3 476 58.4
Manes.04G047300 Manihot esculenta HOM05D002112 ORTHO05D005830 7.1e-135 485.0 494 55.9
Sabra17G0015800 Salix brachista HOM05D002112 ORTHO05D005830 7.1e-135 485.0 495 56.0
Lj6g0007258 Lotus japonicus HOM05D002112 ORTHO05D005830 9.2e-135 484.6 494 55.3
Sc19g0002800 Simmondsia chinensis HOM05D002112 ORTHO05D005830 9.2e-135 484.6 494 56.3
Actinidia22156 Actinidia chinensis HOM05D002112 ORTHO05D005830 1.2e-134 484.2 491 56.2
Nitab4.5_0000632g0010 Nicotiana tabacum HOM05D002112 ORTHO05D005830 1.2e-134 484.2 502 53.2
Duzib151G0469 Durio zibethinus HOM05D002112 ORTHO05D005830 3.5e-134 482.6 494 55.5
Solyc02g082030.3 Solanum lycopersicum HOM05D002112 ORTHO05D005830 1.7e-133 480.3 500 53.6
Sopen02g026670 Solanum pennellii HOM05D002112 ORTHO05D005830 1.7e-133 480.3 500 53.6
MD04G1045800 Malus domestica HOM05D002112 ORTHO05D005830 3.9e-133 479.2 494 55.7
PGSC0003DMG400007324 Solanum tuberosum HOM05D002112 ORTHO05D005830 5.1e-133 478.8 501 53.1
Ciclev10020598m.g Citrus clementina HOM05D002112 ORTHO05D005830 6.6e-133 478.4 494 54.3
Prupe.1G198700 Prunus persica HOM05D002112 ORTHO05D005830 6.6e-133 478.4 466 58.2
CARHR095970 Cardamine hirsuta HOM05D002112 ORTHO05D005830 1.1e-132 477.6 500 55.6
Cc09_g04780 Coffea canephora HOM05D002112 ORTHO05D005830 4.3e-132 475.7 500 55.0
Thecc.04G174100 Theobroma cacao HOM05D002112 ORTHO05D005830 4.3e-132 475.7 494 55.3
Thhalv10020922m.g Eutrema salsugineum HOM05D002112 ORTHO05D005830 5.6e-132 475.3 494 54.9
Gohir.D10G126900 Gossypium hirsutum HOM05D002112 ORTHO05D005830 7.3e-132 474.9 495 55.4
DCAR_007772 Daucus carota HOM05D002112 ORTHO05D005830 9.6e-132 474.6 492 54.7
Potri.017G026100 Populus trichocarpa HOM05D002112 ORTHO05D005830 9.6e-132 474.6 495 55.6
Gohir.A10G139900 Gossypium hirsutum HOM05D002112 ORTHO05D005830 1.6e-131 473.8 495 55.2
Peaxi162Scf00276g01115 Petunia axillaris HOM05D002112 ORTHO05D005830 2.8e-131 473.0 499 56.3
Ca_04336_v3 Cicer arietinum L. HOM05D002112 ORTHO05D005830 3.6e-131 472.6 494 54.5
Peaxi162Scf00036g02120 Petunia axillaris HOM05D002112 ORTHO05D005830 4.7e-131 472.2 494 54.3
Gorai.011G139800 Gossypium raimondii HOM05D002112 ORTHO05D005830 6.2e-131 471.9 495 55.2
AUR62031652 Chenopodium quinoa HOM05D002112 ORTHO05D005830 2.4e-130 469.9 465 57.6
HanXRQChr02g0033051 Helianthus annuus HOM05D002112 ORTHO05D005830 2.4e-130 469.9 479 54.9
Sp3g18350 Schrenkiella parvula HOM05D002112 ORTHO05D005830 3.1e-130 469.5 494 54.7
vmacro13897 Vaccinium macrocarpon HOM05D002112 ORTHO05D005830 5.2e-130 468.8 495 54.7
Carub.0003s2027 Capsella rubella HOM05D002112 ORTHO05D005830 1.2e-129 467.6 494 54.5
Potri.007G131700 Populus trichocarpa HOM05D002112 ORTHO05D005830 2.0e-129 466.8 495 54.7
COL.COLO4_08219 Corchorus olitorius HOM05D002112 ORTHO05D005830 3.4e-129 466.1 497 54.3
TAR369G0031 Trochodendron aralioides HOM05D002112 ORTHO05D005830 3.4e-129 466.1 465 55.9
Lalb_Chr17g0347631 Lupinus albus HOM05D002112 ORTHO05D005830 7.6e-129 464.9 496 52.6
TWI38G0996 Tripterygium wilfordii HOM05D002112 ORTHO05D005830 1.3e-128 464.2 495 53.9
HanXRQChr12g0380031 Helianthus annuus HOM05D002112 ORTHO05D005830 1.7e-128 463.8 500 53.6
arahy.Tifrunner.gnm1.ann1.PNXW1P Arachis hypogaea HOM05D002112 ORTHO05D005830 2.9e-128 463.0 431 58.0
BolC5t33124H Brassica oleracea HOM05D002112 ORTHO05D005830 2.9e-128 463.0 490 54.3
BcaC05g28317 Brassica carinata HOM05D002112 ORTHO05D005377 3.8e-128 462.6 490 54.3
C05p44010 Brassica napus HOM05D002112 ORTHO05D005377 3.8e-128 462.6 491 54.8
CAN.G809.29 Capsicum annuum HOM05D002112 ORTHO05D005830 3.8e-128 462.6 506 51.0
AL3G34040 Arabidopsis lyrata HOM05D002112 ORTHO05D005830 4.9e-128 462.2 450 56.7
arahy.Tifrunner.gnm1.ann1.9N9T88 Arachis hypogaea HOM05D002112 ORTHO05D005830 6.4e-128 461.8 431 58.0
CANSAT78G1637 Cannabis sativa HOM05D002112 ORTHO05D005830 6.4e-128 461.8 494 54.3
unitig_748.g7486 Utricularia gibba HOM05D002112 ORTHO05D005830 8.4e-128 461.5 489 55.0
FAN26G0200 Fragaria x ananassa HOM05D002112 ORTHO05D005830 1.1e-127 461.1 496 55.2
Rhsim07G0082300 Rhododendron simsii HOM05D002112 ORTHO05D005830 1.1e-127 461.1 497 54.3
Actinidia04201 Actinidia chinensis HOM05D002112 ORTHO05D005830 1.4e-127 460.7 523 53.2
A05p28600 Brassica napus HOM05D002112 ORTHO05D005377 1.4e-127 460.7 446 57.0
BraA05t21737Z Brassica rapa HOM05D002112 ORTHO05D005377 1.4e-127 460.7 446 57.0
ECA246G0582 Erigeron canadensis HOM05D002112 ORTHO05D005830 1.4e-127 460.7 430 58.8
Eucgr.I00215 Eucalyptus grandis HOM05D002112 ORTHO05D005830 3.2e-127 459.5 497 53.1
FAN23G2661 Fragaria x ananassa HOM05D002112 ORTHO05D005830 3.2e-127 459.5 496 55.0
Sabra07G0106900 Salix brachista HOM05D002112 ORTHO05D005830 5.4e-127 458.8 495 53.9
Sabra07G0118800 Salix brachista HOM05D002112 ORTHO05D005830 5.4e-127 458.8 495 53.9
Aa31LG8G7130 Aethionema arabicum HOM05D002112 ORTHO05D005830 7.1e-127 458.4 498 54.0
FvH4_1g23450 Fragaria vesca HOM05D002112 ORTHO05D005830 9.3e-127 458.0 496 54.8
FAN19G2557 Fragaria x ananassa HOM05D002112 ORTHO05D005830 9.3e-127 458.0 496 54.8
Lalb_Chr04g0249531 Lupinus albus HOM05D002112 ORTHO05D005830 1.2e-126 457.6 498 53.0
VMungo0540G0891 Vigna mungo HOM05D002112 ORTHO05D005830 2.1e-126 456.8 466 53.9
Glyma.20G048400 Glycine max HOM05D002112 ORTHO05D005830 1.0e-125 454.5 486 53.1
Psat2g021160 Pisum sativum HOM05D002112 ORTHO05D005830 1.0e-125 454.5 495 51.9
TPR.G11324 Trifolium pratense HOM05D002112 ORTHO05D005830 1.3e-125 454.1 458 55.2
Glyma.13G074600 Glycine max HOM05D002112 ORTHO05D005830 3.9e-125 452.6 487 53.0
Medtr3g040090 Medicago truncatula HOM05D002112 ORTHO05D005830 8.7e-125 451.4 482 53.5
Phvul.006G021000 Phaseolus vulgaris HOM05D002112 ORTHO05D005830 2.8e-123 446.4 466 53.2
QL11p031638 Quercus lobata HOM05D002112 ORTHO05D005830 3.6e-123 446.0 494 51.8
Aqoxy7G04120 Aquilegia oxysepala HOM05D002112 ORTHO05D005830 1.4e-122 444.1 499 50.9
BolC1t04335H Brassica oleracea HOM05D002112 ORTHO05D005377 1.8e-122 443.7 474 53.4
BcaB04g20660 Brassica carinata HOM05D002112 ORTHO05D005830 2.0e-121 440.3 430 56.3
BcaC09g48987 Brassica carinata HOM05D002112 ORTHO05D005377 7.6e-121 438.3 470 53.0
MBI14_g20102_MAGBIO Magnolia biondii HOM05D002112 ORTHO05D005830 7.6e-121 438.3 495 51.1
Ca_06168_v3 Cicer arietinum L. HOM05D002112 ORTHO05D005830 1.3e-120 437.6 455 53.4
Ca_06185_v3 Cicer arietinum L. HOM05D002112 ORTHO05D005830 1.3e-120 437.6 455 53.4
Medtr5g088340 Medicago truncatula HOM05D002112 ORTHO05D005830 1.7e-120 437.2 495 51.7
C01p43770 Brassica napus HOM05D002112 ORTHO05D005830 2.9e-120 436.4 446 54.0
Nn2g10363 Nelumbo nucifera HOM05D002112 ORTHO05D005830 2.9e-120 436.4 451 53.9
Dinv21066 Davidia involucrata HOM05D002112 ORTHO05D005830 1.9e-119 433.7 498 53.0
Nitab4.5_0003902g0080 Nicotiana tabacum HOM05D002112 ORTHO05D005830 2.4e-119 433.3 447 53.0
PSO339G3553 Papaver somniferum HOM05D002112 ORTHO05D005830 4.6e-118 429.1 467 52.5
MELO3C015704.2 Cucumis melo HOM05D002112 ORTHO05D005830 1.0e-117 427.9 457 52.3
EL10Ac2g03438 Beta vulgaris HOM05D002112 ORTHO05D005830 9.6e-116 421.4 465 53.3
CiPaw.06G167000 Carya illinoinensis HOM05D002112 ORTHO05D005830 1.3e-115 421.0 496 49.2
ATR0559G336 Amborella trichopoda HOM05D002112 ORTHO05D005830 3.1e-114 416.4 495 49.5
Phvul.008G205800 Phaseolus vulgaris HOM05D002112 ORTHO05D005830 1.7e-112 410.6 484 48.3
Glyma.14G040300 Glycine max HOM05D002112 ORTHO05D005830 2.9e-112 409.8 495 47.1
DCAR_003742 Daucus carota HOM05D002112 ORTHO05D005830 6.4e-112 408.7 466 52.4
Oeu010462.1 Olea europaea HOM05D002112 ORTHO05D005830 6.4e-112 408.7 289 73.0
MSTRG.24953 Avicennia marina HOM05D002112 ORTHO05D005830 3.0e-109 399.8 276 74.3
Duzib212G0454 Durio zibethinus HOM05D002112 ORTHO05D005830 5.1e-109 399.1 495 49.1
Haze_10243 Corylus avellana HOM05D002112 ORTHO05D005830 1.5e-108 397.5 414 54.3
Ah.14g085620 Amaranthus hybridus HOM05D002112 ORTHO05D005830 2.5e-108 396.7 496 49.6
VMungo0647G1998 Vigna mungo HOM05D002112 ORTHO05D005830 1.3e-107 394.4 495 47.5
BraA01t03533Z Brassica rapa HOM05D002112 ORTHO05D005830 3.1e-106 389.8 450 51.1
Zm00001eb362140 Zea mays HOM05D002112 ORTHO05D005830 9.0e-106 388.3 453 47.9
Gohir.A02G114100 Gossypium hirsutum HOM05D002112 ORTHO05D005830 7.6e-105 385.2 289 68.2
Gohir.A08G075500 Gossypium hirsutum HOM05D002112 ORTHO05D005830 2.9e-104 383.3 288 68.8
CDE08G1601 Ceratophyllum demersum HOM05D002112 ORTHO05D005830 1.4e-103 380.9 494 45.1
Os01g0974000 Oryza sativa ssp. japonica HOM05D002112 ORTHO05D005830 2.5e-103 380.2 414 50.7
Hma1.2p1_2907F.1_g330140 Hydrangea macrophylla HOM05D002112 ORTHO05D005830 2.1e-102 377.1 446 49.3
Lsat_1_v5_gn_3_102740 Lactuca sativa HOM05D002112 ORTHO05D005830 4.6e-102 375.9 490 48.4
Lj1A1151T82 Lonicera japonica HOM05D002112 ORTHO05D005830 3.9e-101 372.9 290 65.5
ClCG09G018870 Citrullus lanatus HOM05D002112 ORTHO05D005830 2.8e-99 366.7 251 71.3
vmacro12410 Vaccinium macrocarpon HOM05D002112 ORTHO05D005830 8.2e-99 365.2 377 56.0
CsaV3_7G002030 Cucumis sativus L. HOM05D002112 ORTHO05D005830 3.1e-98 363.2 279 65.9
BcaB06g26098 Brassica carinata HOM05D002112 ORTHO05D005377 5.3e-98 362.5 244 73.0
AT3G20320 Arabidopsis thaliana HOM05D002112 ORTHO05D005830 5.9e-97 359.0 243 72.4
Sed0017575 Sechium edule HOM05D002112 ORTHO05D005830 7.2e-95 352.1 250 69.6
SEGI_07155 Sequoiadendron giganteum HOM05D002112 ORTHO05D005830 2.7e-94 350.1 443 43.8
A01p34360 Brassica napus HOM05D002112 ORTHO05D005830 7.9e-94 348.6 244 70.5
MD13G1257900 Malus domestica HOM05D002112 ORTHO05D005830 2.0e-92 344.0 298 62.8
ClCG02G003310 Citrullus lanatus HOM05D002112 ORTHO05D005830 8.2e-91 338.6 239 68.6
HPP92_018143 Vanilla planifolia HOM05D002112 ORTHO05D005830 9.1e-90 335.1 451 43.5
Psat5g187680 Pisum sativum HOM05D002112 ORTHO05D005830 1.3e-88 331.3 279 63.8
Mapoly0038s0049 Marchantia polymorpha HOM05D002112 ORTHO05D005830 5.0e-88 329.3 431 42.5
Zm00001eb139760 Zea mays HOM05D002112 ORTHO05D005830 9.4e-87 325.1 231 66.7
Pp3c12_4060 Physcomitrium patens HOM05D002112 ORTHO05D005830 3.6e-86 323.2 452 41.2
SMO356G0377 Selaginella moellendorffii HOM05D002112 ORTHO05D005830 5.1e-85 319.3 413 42.9
PSO151G0006 Papaver somniferum HOM05D002112 ORTHO05D005830 5.7e-84 315.8 479 42.4
Cfa004646 Carpinus fangiana HOM05D002112 ORTHO05D005830 1.7e-83 314.3 213 71.4
Pp3c3_12480 Physcomitrium patens HOM05D002112 ORTHO05D005830 1.7e-83 314.3 450 39.8
Peaxi162Scf00580g00069 Petunia axillaris HOM05D002112 ORTHO05D005830 4.1e-82 309.7 231 68.8
SHI29120 Sapria himalayana HOM05D002112 ORTHO05D005830 5.0e-80 302.8 319 52.0
AagrBONN_evm.TU.Sc2ySwM_362.2463 Anthoceros agrestis HOM05D002112 ORTHO05D005830 8.5e-80 302.0 454 39.9
Hund03181 Selenicereus undatus HOM05D002112 ORTHO05D005830 2.7e-78 297.0 386 46.9
CBR_g24153 Chara braunii HOM05D002112 ORTHO05D005830 1.5e-76 291.2 416 39.4
TAR623G0168 Trochodendron aralioides HOM05D002112 ORTHO05D005830 7.4e-76 288.9 231 64.5
QL02p069440 Quercus lobata HOM05D002112 ORTHO05D005830 1.7e-72 277.7 211 66.8
MCO07G431 Micromonas commoda HOM05D002112 ORTHO05D005830 5.4e-58 229.6 423 33.8
Sc07g0004100 Simmondsia chinensis HOM05D002112 ORTHO05D005830 3.1e-50 203.8 178 61.8
Cre16.g694400 Chlamydomonas reinhardtii HOM05D002112 ORTHO05D005830 5.4e-50 203.0 407 31.7
Glyma.02G275800 Glycine max HOM05D002112 ORTHO05D005830 2.5e-47 194.1 167 61.7
PRCOL_00002736 Prasinoderma coloniale HOM05D002112 ORTHO05D005830 1.6e-46 191.4 409 30.8
FAN28G2322 Fragaria x ananassa HOM05D002112 ORTHO05D005830 6.8e-37 159.5 101 82.2
Oeu010464.1 Olea europaea HOM05D002112 ORTHO05D005830 2.0e-36 157.9 101 83.2
Lj1A1151T83 Lonicera japonica HOM05D002112 ORTHO05D005830 5.8e-36 156.4 97 84.5
Cpa.g.c39485 Carica papaya HOM05D002112 ORTHO05D005830 1.3e-35 155.2 89 82.0
Oeu037772.1 Olea europaea HOM05D002112 ORTHO05D005830 1.3e-35 155.2 101 81.2
AUR62038882 Chenopodium quinoa HOM05D002112 ORTHO05D005830 2.9e-35 154.1 97 82.5
TAR623G1172 Trochodendron aralioides HOM05D002112 ORTHO05D005830 8.3e-35 152.5 101 81.2
MD13G1258100 Malus domestica HOM05D002112 ORTHO05D005830 1.9e-26 124.8 77 83.1
A01p34370 Brassica napus HOM05D000233 ORTHO05D000020 1.4e-18 98.6 58 84.5
Gohir.A08G072300 Gossypium hirsutum HOM05D002112 ORTHO05D010805 2.4e-18 97.8 66 66.7
Peaxi162Scf00036g02121 Petunia axillaris HOM05D002112 ORTHO05D005830 4.2e-18 97.1 61 82.0
Sc07g0004110 Simmondsia chinensis HOM05D002112 ORTHO05D010805 2.1e-14 84.7 51 82.4
Cre09.g395028 Chlamydomonas reinhardtii HOM05D002112 ORTHO05D143200 7.6e-12 76.3 105 40.0
Sc09g0004030 Simmondsia chinensis HOM05D005136 ORTHO05D006619 9.9e-12 75.9 69 58.0
Hma1.2p1_1220F.1_g268110 Hydrangea macrophylla HOM05D002112 ORTHO05D005830 9.6e-07 59.3 40 70.0
Hma1.2p1_1220F.1_g268115 Hydrangea macrophylla HOM05D002112 ORTHO05D005830 9.6e-07 59.3 40 70.0
Hma1.2p1_2907F.1_g330145 Hydrangea macrophylla HOM05D002112 ORTHO05D005830 9.6e-07 59.3 40 70.0


User provided reference genes

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