Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 6.3e-244 847.0 438 100.0
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 3.1e-150 535.8 468 63.2
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 9.7e-128 461.1 479 54.5
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 2.6e-112 409.8 466 50.9
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 2.9e-108 396.4 451 49.2
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 1.1e-107 394.4 450 50.7
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 3.0e-105 386.3 464 48.1
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 2.6e-104 383.3 482 46.3
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 1.3e-103 380.9 463 47.7
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 2.4e-102 376.7 453 47.2
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 2.8e-98 363.2 454 46.7
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 8.0e-98 361.7 447 46.8
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 1.0e-97 361.3 482 46.1
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 1.3e-95 354.4 465 45.4
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 5.4e-94 349.0 455 46.8
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 5.9e-93 345.5 469 44.6
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 1.3e-92 344.4 452 46.5
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 1.1e-91 341.3 451 45.5
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 3.3e-91 339.7 459 45.1
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 5.6e-91 339.0 454 43.8
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 5.6e-91 339.0 451 45.7
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 2.8e-90 336.7 449 44.3
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 3.6e-90 336.3 462 44.4
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 6.1e-90 335.5 446 44.8
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 8.0e-90 335.1 455 42.6
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 8.0e-90 335.1 456 44.3
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 8.0e-90 335.1 452 44.5
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 1.0e-89 334.7 456 44.1
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 1.8e-89 334.0 452 45.1
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 3.4e-88 329.7 450 44.9
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 1.9e-86 323.9 462 41.6
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 4.1e-86 322.8 447 43.0
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 9.2e-86 321.6 468 41.9
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 1.2e-85 321.2 463 42.1
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 3.5e-85 319.7 470 42.6
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 1.0e-84 318.2 447 42.3
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 3.0e-84 316.6 462 42.0
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 6.6e-84 315.5 444 43.2
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 6.6e-84 315.5 449 42.8
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 1.1e-83 314.7 470 42.1
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 1.9e-83 313.9 458 42.8
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 2.1e-82 310.5 444 42.1
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 6.2e-82 308.9 461 41.9
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 8.1e-82 308.5 465 38.5
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.4e-81 307.8 453 42.4
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.3e-81 307.0 452 41.8
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 1.2e-80 304.7 472 39.2
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.6e-80 303.5 453 41.5
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.9e-79 300.1 444 41.9
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 1.4e-78 297.7 451 39.7
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 5.4e-78 295.8 461 39.3
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 2.1e-77 293.9 462 40.0
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 2.7e-77 293.5 445 38.4
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 2.5e-75 287.0 464 38.1
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 5.6e-75 285.8 396 42.4
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 9.5e-75 285.0 451 39.0
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 9.5e-75 285.0 455 39.3
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 1.2e-74 284.6 451 39.5
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 1.6e-74 284.3 449 39.6
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 2.8e-74 283.5 454 39.2
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 1.4e-73 281.2 460 38.0
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 1.8e-73 280.8 326 49.7
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 2.3e-73 280.4 452 40.3
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 4.0e-73 279.6 450 38.2
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 1.2e-72 278.1 339 47.5
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 3.4e-72 276.6 472 39.2
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 5.8e-72 275.8 452 39.8
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 5.8e-72 275.8 456 38.8
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 5.8e-72 275.8 448 39.5
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 5.8e-72 275.8 395 42.3
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 7.6e-72 275.4 449 40.1
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 6.4e-71 272.3 447 38.9
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 2.1e-69 267.3 451 37.7
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 1.0e-68 265.0 424 40.6
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 1.7e-68 264.2 451 39.0
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 1.7e-68 264.2 460 38.3
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 5.1e-68 262.7 401 41.6
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 1.9e-67 260.8 328 46.6
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 3.1e-65 253.4 448 36.4
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 4.0e-65 253.1 453 38.6
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 6.8e-65 252.3 312 46.5
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 6.8e-65 252.3 451 37.9
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 2.6e-64 250.4 455 37.6
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 3.4e-64 250.0 451 37.7
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 1.4e-62 244.6 453 36.9
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 1.4e-62 244.6 455 37.4
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 1.4e-62 244.6 448 37.7
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 4.6e-61 239.6 453 36.2
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 1.0e-60 238.4 454 35.7
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 1.0e-60 238.4 453 37.1
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 3.9e-60 236.5 454 36.6
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 1.1e-59 235.0 462 34.2
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 4.3e-59 233.0 450 36.4
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 2.1e-58 230.7 480 35.4
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 2.2e-55 220.7 336 42.0
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 1.1e-51 208.4 457 34.4
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 2.6e-48 197.2 285 42.1
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 7.1e-46 189.1 304 38.5
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 1.8e-33 147.9 166 50.0
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 9.7e-27 125.6 235 37.0
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 1.8e-20 104.8 83 63.9
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 3.9e-20 103.6 139 43.9
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.5e-19 101.7 261 30.7
Pp3c13_1090 Physcomitrium patens HOM05D006143 ORTHO05D007587 3.7e-18 97.1 433 25.2
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 6.3e-18 96.3 172 29.1
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 6.3e-18 96.3 172 29.1
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 1.8e-17 94.7 114 44.7
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 3.4e-16 90.5 347 27.4
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 1.3e-15 88.6 154 35.1
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 2.9e-15 87.4 224 27.7
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.5e-11 75.1 108 39.8
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 2.0e-11 74.7 119 37.8
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 7.4e-11 72.8 424 22.9
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.7e-10 71.6 119 37.0
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.7e-10 71.6 119 37.0
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 8.2e-10 69.3 139 33.8
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 1.0e-07 62.4 57 52.6
CSS0047646 Camellia sinensis var. sinensis HOM05D000493 ORTHO05D001638 1.7e-07 61.6 72 50.0
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.1e-06 58.9 96 36.5
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 9.4e-06 55.8 130 33.8
RcHm_v2.0_Chr3g0477111 Rosa chinensis HOM05D006143 ORTHO05D007587 9.4e-06 55.8 37 67.6


User provided reference genes

Program Settings