Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold166G38351 Striga asiatica HOM05D006490 ORTHO05D008301 1.8e-75 285.8 138 100.0
SGA_v2.0_scaffold153G37067 Striga asiatica HOM05D006490 ORTHO05D008301 2.4e-40 169.1 110 80.0
MSTRG.17232 Avicennia marina HOM05D006490 ORTHO05D008301 7.5e-34 147.5 110 67.3
SGA_v2.0_scaffold79G25583 Striga asiatica HOM05D006490 ORTHO05D008301 2.4e-32 142.5 83 88.0
Migut.B01686 Erythranthe guttata HOM05D006490 ORTHO05D008301 3.1e-32 142.1 110 67.3
ClCG05G001900 Citrullus lanatus HOM05D006490 ORTHO05D008301 1.0e-30 137.1 102 68.6
PGSC0003DMG400017050 Solanum tuberosum HOM05D006490 ORTHO05D008301 2.9e-30 135.6 112 63.4
CsaV3_3G009300 Cucumis sativus L. HOM05D006490 ORTHO05D008301 3.8e-30 135.2 110 64.5
Nitab4.5_0004550g0090 Nicotiana tabacum HOM05D006490 ORTHO05D008301 8.6e-30 134.0 110 62.7
CAN.G170.51 Capsicum annuum HOM05D006490 ORTHO05D008301 1.9e-29 132.9 112 61.6
Solyc01g091800.3 Solanum lycopersicum HOM05D006490 ORTHO05D008301 1.9e-29 132.9 112 62.5
Sopen01g037580 Solanum pennellii HOM05D006490 ORTHO05D008301 2.5e-29 132.5 112 62.5
MELO3C006150.2 Cucumis melo HOM05D006490 ORTHO05D008301 4.2e-29 131.7 110 63.6
DCAR_023894 Daucus carota HOM05D006490 ORTHO05D008301 7.2e-29 131.0 107 62.6
Nitab4.5_0010430g0030 Nicotiana tabacum HOM05D006490 ORTHO05D008301 7.2e-29 131.0 102 65.7
arahy.Tifrunner.gnm1.ann1.M2DA0A Arachis hypogaea HOM05D006490 ORTHO05D008301 9.5e-29 130.6 110 62.7
COL.COLO4_12627 Corchorus olitorius HOM05D006490 ORTHO05D008301 1.2e-28 130.2 102 64.7
Sc02g0002220 Simmondsia chinensis HOM05D006490 ORTHO05D008301 2.1e-28 129.4 112 58.9
Manes.05G040300 Manihot esculenta HOM05D006490 ORTHO05D008301 2.8e-28 129.0 102 64.7
Potri.014G077100 Populus trichocarpa HOM05D006490 ORTHO05D008301 3.6e-28 128.6 102 65.7
TWI59G0097 Tripterygium wilfordii HOM05D006490 ORTHO05D008301 4.7e-28 128.3 110 59.1
Hma1.2p1_0398F.1_g143820 Hydrangea macrophylla HOM05D006490 ORTHO05D008301 6.1e-28 127.9 107 60.7
Oeu024418.2 Olea europaea HOM05D006490 ORTHO05D008301 6.1e-28 127.9 136 52.9
QL08p050661 Quercus lobata HOM05D006490 ORTHO05D008301 8.0e-28 127.5 107 64.5
Thecc.01G368800 Theobroma cacao HOM05D006490 ORTHO05D008301 8.0e-28 127.5 102 62.7
HanXRQChr06g0169021 Helianthus annuus HOM05D006490 ORTHO05D008301 1.4e-27 126.7 108 62.0
Nn1g01348 Nelumbo nucifera HOM05D006490 ORTHO05D008301 1.4e-27 126.7 107 63.6
Ciclev10020970m.g Citrus clementina HOM05D006490 ORTHO05D008301 2.3e-27 125.9 107 62.6
Glyma.18G227900 Glycine max HOM05D006490 ORTHO05D008301 2.3e-27 125.9 107 60.7
TAR656G0005 Trochodendron aralioides HOM05D006490 ORTHO05D008301 2.3e-27 125.9 107 61.7
Cfa004180 Carpinus fangiana HOM05D006490 ORTHO05D008301 3.0e-27 125.6 124 54.0
Glyma.09G264100 Glycine max HOM05D006490 ORTHO05D008301 3.0e-27 125.6 107 59.8
TAR003G0001 Trochodendron aralioides HOM05D006490 ORTHO05D008301 4.0e-27 125.2 107 61.7
VMungo1383G1476 Vigna mungo HOM05D006490 ORTHO05D008301 5.2e-27 124.8 107 60.7
Atru.chr7.2364 Acer truncatum HOM05D006490 ORTHO05D008301 8.9e-27 124.0 108 63.9
Cc02_g37220 Coffea canephora HOM05D006490 ORTHO05D008301 1.2e-26 123.6 105 63.8
Cc02_g37650 Coffea canephora HOM05D006490 ORTHO05D008301 1.2e-26 123.6 105 63.8
Aqoxy5G03982 Aquilegia oxysepala HOM05D006490 ORTHO05D008301 1.5e-26 123.2 107 60.7
Rhsim01G0155600 Rhododendron simsii HOM05D006490 ORTHO05D008301 1.5e-26 123.2 114 58.8
Duzib138G1247 Durio zibethinus HOM05D006490 ORTHO05D008301 2.0e-26 122.9 102 60.8
CARHR000480 Cardamine hirsuta HOM05D006490 ORTHO05D008301 2.6e-26 122.5 107 59.8
Medtr7g076280 Medicago truncatula HOM05D006490 ORTHO05D008301 2.6e-26 122.5 107 59.8
Gohir.D11G088800 Gossypium hirsutum HOM05D006490 ORTHO05D008301 3.4e-26 122.1 102 58.8
Gorai.007G094900 Gossypium raimondii HOM05D006490 ORTHO05D008301 3.4e-26 122.1 102 58.8
Lj1g0027165 Lotus japonicus HOM05D006490 ORTHO05D008301 3.4e-26 122.1 102 62.7
Psat0s1132g0040 Pisum sativum HOM05D006490 ORTHO05D008301 3.4e-26 122.1 107 57.9
CANSAT56G3458 Cannabis sativa HOM05D006490 ORTHO05D008301 4.4e-26 121.7 107 58.9
Carub.0001s0036 Capsella rubella HOM05D006490 ORTHO05D008301 4.4e-26 121.7 117 58.1
Peaxi162Scf00021g00524 Petunia axillaris HOM05D006490 ORTHO05D008301 4.4e-26 121.7 112 59.8
Phvul.008G070300 Phaseolus vulgaris HOM05D006490 ORTHO05D008301 4.4e-26 121.7 107 58.9
GSVIVG01027529001 Vitis vinifera HOM05D006490 ORTHO05D008301 4.4e-26 121.7 107 60.7
Actinidia33445 Actinidia chinensis HOM05D006490 ORTHO05D008301 5.7e-26 121.3 107 58.9
CiPaw.01G053400 Carya illinoinensis HOM05D006490 ORTHO05D008301 5.7e-26 121.3 102 61.8
AUR62004290 Chenopodium quinoa HOM05D006490 ORTHO05D008301 5.7e-26 121.3 113 55.8
Lalb_Chr01g0021141 Lupinus albus HOM05D006490 ORTHO05D008301 5.7e-26 121.3 107 61.7
AL1G10470 Arabidopsis lyrata HOM05D006490 ORTHO05D008301 9.8e-26 120.6 117 56.4
Thhalv10008101m.g Eutrema salsugineum HOM05D006490 ORTHO05D008301 9.8e-26 120.6 107 59.8
Lsat_1_v5_gn_7_8340 Lactuca sativa HOM05D006490 ORTHO05D008301 9.8e-26 120.6 107 58.9
PSO063G2041 Papaver somniferum HOM05D006490 ORTHO05D008301 9.8e-26 120.6 113 55.8
AT1G01860 Arabidopsis thaliana HOM05D006490 ORTHO05D008301 1.3e-25 120.2 117 56.4
arahy.Tifrunner.gnm1.ann1.90SIZ3 Arachis hypogaea HOM05D006490 ORTHO05D008301 1.3e-25 120.2 127 54.3
Gohir.A11G084700 Gossypium hirsutum HOM05D006490 ORTHO05D008301 1.3e-25 120.2 102 58.8
Lj9A577G54 Lonicera japonica HOM05D006490 ORTHO05D008301 1.3e-25 120.2 108 56.5
C08p53880 Brassica napus HOM05D002904 ORTHO05D003206 1.7e-25 119.8 107 59.8
AUR62033365 Chenopodium quinoa HOM05D006490 ORTHO05D008301 1.7e-25 119.8 107 57.0
TPR.G37730 Trifolium pratense HOM05D006490 ORTHO05D008301 1.7e-25 119.8 107 57.0
Eucgr.D02236 Eucalyptus grandis HOM05D006490 ORTHO05D008301 2.2e-25 119.4 107 59.8
RcHm_v2.0_Chr1g0352201 Rosa chinensis HOM05D006490 ORTHO05D008301 2.2e-25 119.4 102 59.8
CSS0016422 Camellia sinensis var. sinensis HOM05D006490 ORTHO05D008301 2.9e-25 119.0 112 58.0
Ca_07866_v3 Cicer arietinum L. HOM05D006490 ORTHO05D008301 2.9e-25 119.0 107 57.9
FAN10G3169 Fragaria x ananassa HOM05D006490 ORTHO05D008301 2.9e-25 119.0 102 59.8
FAN10G0695 Fragaria x ananassa HOM05D006490 ORTHO05D008301 3.7e-25 118.6 102 59.8
BraA09t42265Z Brassica rapa HOM05D002904 ORTHO05D003206 4.9e-25 118.2 107 58.9
FvH4_7g13110 Fragaria vesca HOM05D006490 ORTHO05D008301 4.9e-25 118.2 102 58.8
FAN06G2547 Fragaria x ananassa HOM05D006490 ORTHO05D008301 4.9e-25 118.2 102 58.8
Sp1g00430 Schrenkiella parvula HOM05D006490 ORTHO05D008301 4.9e-25 118.2 107 58.9
CDE12G0440 Ceratophyllum demersum HOM05D006490 ORTHO05D008301 6.3e-25 117.9 112 58.0
ATR0757G055 Amborella trichopoda HOM05D006490 ORTHO05D008301 1.1e-24 117.1 107 58.9
FAN01G0731 Fragaria x ananassa HOM05D006490 ORTHO05D008301 1.4e-24 116.7 102 58.8
FAN03G0539 Fragaria x ananassa HOM05D006490 ORTHO05D008301 1.4e-24 116.7 102 58.8
THA.LOC104814092 Tarenaya hassleriana HOM05D006490 ORTHO05D008301 2.4e-24 115.9 91 63.7
Ah.05g176030 Amaranthus hybridus HOM05D006490 ORTHO05D008301 3.2e-24 115.5 107 57.0
MD07G1128700 Malus domestica HOM05D006490 ORTHO05D008301 3.2e-24 115.5 105 59.0
Prupe.2G154300 Prunus persica HOM05D006490 ORTHO05D008301 4.1e-24 115.2 102 59.8
Aa31LG1G11190 Aethionema arabicum HOM05D006373 ORTHO05D008145 7.0e-24 114.4 107 57.0
ECA236G2797 Erigeron canadensis HOM05D006490 ORTHO05D008301 1.6e-23 113.2 107 56.1
CiPaw.01G023700 Carya illinoinensis HOM05D006490 ORTHO05D008301 7.8e-23 110.9 115 53.9
FAN06G1200 Fragaria x ananassa HOM05D006490 ORTHO05D008301 1.0e-22 110.5 111 54.1
Zm00001eb208500 Zea mays HOM05D006490 ORTHO05D008301 1.7e-22 109.8 107 53.3
Sabra14G0055100 Salix brachista HOM05D006490 ORTHO05D008301 1.1e-21 107.1 152 44.7
SGA_v2.0_scaffold35G14106 Striga asiatica HOM05D006490 ORTHO05D405018 1.5e-21 106.7 61 90.2
EL10Ac1g00964 Beta vulgaris HOM05D006490 ORTHO05D008301 1.2e-20 103.6 127 48.0
BolC8t52902H Brassica oleracea HOM05D002904 ORTHO05D003206 3.6e-20 102.1 134 47.0
vmacro20973 Vaccinium macrocarpon HOM05D006490 ORTHO05D008301 8.0e-20 100.9 131 47.3
Pp3c10_22230 Physcomitrium patens HOM05D006490 ORTHO05D008301 4.0e-19 98.6 107 48.6
PGR031G3648 Punica granatum HOM05D006490 ORTHO05D008301 4.0e-19 98.6 102 53.9
HPP92_016044 Vanilla planifolia HOM05D006490 ORTHO05D008301 6.8e-19 97.8 126 45.2
Hund27326 Selenicereus undatus HOM05D006490 ORTHO05D008301 8.9e-19 97.4 146 41.8
Haze_15229 Corylus avellana HOM05D006490 ORTHO05D008301 4.4e-18 95.1 81 61.7
Mapoly0057s0065 Marchantia polymorpha HOM05D006490 ORTHO05D008301 4.4e-18 95.1 107 47.7
SMO244G0093 Selaginella moellendorffii HOM05D006490 ORTHO05D008301 2.9e-17 92.4 107 44.9
Gorai.009G376300 Gossypium raimondii HOM05D006490 ORTHO05D008301 6.4e-17 91.3 74 62.2
Cpa.g.sc18.199 Carica papaya HOM05D006490 ORTHO05D008301 3.3e-13 79.0 64 60.9
MBI12_g25032_MAGBIO Magnolia biondii HOM05D006490 ORTHO05D008301 1.1e-11 73.9 58 62.1
MCO10G251 Micromonas commoda HOM05D006490 ORTHO05D008301 3.0e-06 55.8 110 29.1
Sed0027884 Sechium edule HOM05D006490 ORTHO05D008301 3.0e-06 55.8 46 60.9


User provided reference genes

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