Gene: THA.LOC104814092
General Information
Structural Information
- Species Tarenaya hassleriana
- Gene Identifier THA.LOC104814092
- Transcript Identifier THA.XM_010541957.2
- Gene Type Coding gene
- Location NW_010965390.1 : 141061-143650 : positive
Gene Family Information
- ID HOM05D006490
- #Genes/#Species 123/92
- Phylogenetic origin
- ID ORTHO05D008301
- #Genes/#Species 121/92
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- GeneID 104814092
- RefSeq XP_010540259.1
- RefSeq XM_010541957.2
- tid rna17748
- id gene11559
Descriptions
- Description ribosomal RNA small subunit methyltransferase, chloroplastic
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006364 | IEA | InterPro | rRNA processing | |
| GO:0000154 | IEA | InterPro | rRNA modification | |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT1G01860 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000179 | IEA | InterPro | rRNA (adenine-N6,N6-)-dimethyltransferase activity | |
| GO:0008649 | IEA | InterPro | rRNA methyltransferase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR023165 | rRNA adenine dimethylase-like, C-terminal |
| IPR001737 | Ribosomal RNA adenine methyltransferase KsgA/Erm |
| IPR011530 | Ribosomal RNA adenine dimethylase |
| IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase |
| IPR020598 | Ribosomal RNA adenine methylase transferase, N-terminal |
| Mapman id | Description |
|---|---|
| 17.1.1.2.1.3 | Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.rRNA adenosine dimethylase (PFC) |