Gene: BraA09t42265Z
General Information
Structural Information
- Species Brassica rapa
- Gene Identifier BraA09t42265Z
- Transcript Identifier BraA09t42265Z
- Gene Type Coding gene
- Location A09 : 57579371-57583163 : negative
Gene Family Information
- ID HOM05D002904
- #Genes/#Species 238/99
- Phylogenetic origin
- ID ORTHO05D003206
- #Genes/#Species 238/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- uniprot A0A3P5YM66
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0044375 | ISO | PLAZA Integrative Orthology | regulation of peroxisome size | AT1G01820 |
| GO:0006364 | IEA | GOA Database | rRNA processing | |
| GO:0006364 | IEA | InterPro | rRNA processing | |
| GO:0016559 | IEA | GOA Database | peroxisome fission | |
| GO:0016559 | IEA | InterPro | peroxisome fission | |
| GO:0000154 | IEA | GOA Database | rRNA modification | |
| GO:0000154 | IEA | InterPro | rRNA modification | |
| GO:0032259 | IEA | GOA Database | methylation | |
| GO:0007031 | IEA | GOA Database | peroxisome organization | |
| GO:0031167 | IEA | GOA Database | rRNA methylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G01820 |
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT1G01820 |
| GO:0008649 | IEA | GOA Database | rRNA methyltransferase activity | |
| GO:0008649 | IEA | InterPro | rRNA methyltransferase activity | |
| GO:0000179 | IEA | GOA Database | rRNA (adenine-N6,N6-)-dimethyltransferase activity | |
| GO:0000179 | IEA | InterPro | rRNA (adenine-N6,N6-)-dimethyltransferase activity | |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0008168 | IEA | GOA Database | methyltransferase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005779 | IEA | GOA Database | integral component of peroxisomal membrane | |
| GO:0005779 | IEA | InterPro | integral component of peroxisomal membrane | |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G01820 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005777 | IEA | GOA Database | peroxisome | |
| GO:0005778 | IEA | GOA Database | peroxisomal membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR020598 | Ribosomal RNA adenine methylase transferase, N-terminal |
| IPR023165 | rRNA adenine dimethylase-like, C-terminal |
| IPR001737 | Ribosomal RNA adenine methyltransferase KsgA/Erm |
| IPR008733 | Peroxisomal biogenesis factor 11 |
| IPR011530 | Ribosomal RNA adenine dimethylase |
| IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase |
| Mapman id | Description |
|---|---|
| 13.6.2.5 | Cell cycle organisation.organelle division.mitochondrion and peroxisome division.peroxisomal fission factor (PEX11) |
| 17.1.1.2.1.3 | Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.rRNA adenosine dimethylase (PFC) |