Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 0.0e+00 1168.7 568 100.0
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 8.1e-260 900.2 602 74.6
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 1.2e-247 859.8 595 74.1
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 2.1e-247 859.0 595 73.9
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 7.4e-237 823.9 554 74.4
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 5.9e-234 814.3 605 68.9
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 5.9e-234 814.3 600 70.2
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 1.9e-232 809.3 605 68.6
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 4.2e-232 808.1 591 70.4
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 1.7e-228 796.2 559 71.4
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 3.1e-227 792.0 591 68.2
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 6.9e-227 790.8 606 66.8
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 1.2e-226 790.0 602 66.9
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 1.5e-226 789.6 583 69.3
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 1.3e-225 786.6 606 66.2
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 3.8e-225 785.0 572 69.8
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 6.5e-225 784.3 579 69.9
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 2.5e-224 782.3 608 67.1
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 3.0e-222 775.4 605 66.8
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 5.1e-222 774.6 608 66.4
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 1.5e-221 773.1 553 70.5
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 3.3e-221 771.9 556 70.1
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 1.7e-220 769.6 581 67.8
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 6.3e-220 767.7 590 66.8
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 1.1e-219 766.9 603 65.5
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 2.4e-219 765.8 587 67.8
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 2.4e-219 765.8 580 66.9
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 5.3e-219 764.6 552 69.7
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 1.2e-218 763.5 590 66.6
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 1.2e-218 763.5 552 69.6
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 1.3e-217 760.0 587 67.3
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 2.2e-217 759.2 558 68.1
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 2.2e-217 759.2 598 65.6
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 2.2e-217 759.2 587 66.6
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 2.9e-217 758.8 581 65.7
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.9e-217 758.8 580 67.2
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 3.8e-217 758.4 560 68.6
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 3.8e-217 758.4 554 68.8
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 6.5e-217 757.7 563 68.0
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 8.5e-217 757.3 552 70.5
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 1.1e-216 756.9 585 67.2
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 1.9e-216 756.1 552 68.3
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 3.2e-216 755.4 580 66.7
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 4.2e-216 755.0 553 69.4
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 9.4e-216 753.8 583 68.1
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 9.4e-216 753.8 572 66.4
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.2e-215 753.4 560 68.4
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 2.1e-215 752.7 572 68.0
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 2.1e-215 752.7 599 64.9
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 4.7e-215 751.5 551 69.0
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 1.0e-214 750.4 585 66.0
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 3.9e-214 748.4 555 67.9
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.1e-213 746.9 575 66.1
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 1.1e-213 746.9 555 67.7
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 3.3e-213 745.3 566 66.6
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 5.7e-213 744.6 608 63.7
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 7.4e-213 744.2 627 63.3
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 1.3e-212 743.4 600 64.2
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 1.4e-211 740.0 567 67.0
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 2.4e-211 739.2 567 67.4
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 4.1e-211 738.4 597 64.8
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 5.3e-211 738.0 592 64.9
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 9.1e-211 737.3 597 64.8
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 9.1e-211 737.3 597 64.8
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 9.1e-211 737.3 555 68.5
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 2.0e-210 736.1 597 64.5
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 2.0e-210 736.1 597 64.5
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 2.0e-210 736.1 602 63.1
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 2.6e-210 735.7 597 64.5
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 2.6e-210 735.7 566 66.6
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 3.5e-210 735.3 589 64.0
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 1.0e-209 733.8 590 65.1
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 1.3e-209 733.4 586 64.3
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 1.7e-209 733.0 586 64.5
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 2.2e-209 732.6 590 64.4
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 2.5e-208 729.2 589 63.8
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 9.4e-208 727.2 590 64.1
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 6.1e-207 724.5 601 64.1
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 4.0e-206 721.8 594 62.5
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 2.2e-204 716.1 542 66.6
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 8.5e-201 704.1 594 63.3
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 9.4e-200 700.7 571 64.3
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 1.6e-199 699.9 553 65.1
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 8.8e-198 694.1 696 55.9
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 2.8e-196 689.1 479 71.2
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 4.0e-190 668.7 713 53.3
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 6.8e-190 667.9 480 71.0
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 3.4e-189 665.6 605 59.8
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 4.9e-188 661.8 583 61.7
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 4.1e-187 658.7 477 70.4
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 5.4e-187 658.3 533 64.4
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 8.6e-185 651.0 552 61.1
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 6.1e-183 644.8 476 69.1
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 1.2e-165 587.4 599 53.8
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 2.2e-156 556.6 423 66.7
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 9.2e-155 551.2 692 47.7
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 9.9e-149 531.2 380 70.5
unitig_0.g1070 Utricularia gibba HOM05D006589 ORTHO05D008350 1.1e-123 448.0 293 74.4
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 3.0e-121 439.9 453 52.5
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 1.2e-101 374.8 529 44.8
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 5.5e-99 365.9 295 64.1
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 3.0e-97 360.1 285 63.2
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 3.0e-97 360.1 285 63.2
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 2.0e-96 357.5 561 39.8
ATR0060G001 Amborella trichopoda HOM05D006589 ORTHO05D008350 2.2e-84 317.4 268 60.4
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 2.2e-79 300.8 236 66.9
RcHm_v2.0_Chr1g0380381 Rosa chinensis HOM05D006589 ORTHO05D008350 4.2e-75 286.6 236 64.8
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 1.2e-72 278.5 227 61.7
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 1.3e-68 265.0 557 33.4
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 2.1e-45 188.0 579 29.4
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 7.6e-40 169.5 172 54.1
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 2.2e-39 167.9 254 39.8
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 1.1e-35 155.6 143 56.6
HPP92_003575 Vanilla planifolia HOM05D006589 ORTHO05D008350 3.4e-32 144.1 185 47.6
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 1.1e-30 139.0 124 55.6
FAN25G1587 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.4e-17 94.7 49 85.7
MCO14G318 Micromonas commoda HOM05D006589 ORTHO05D008350 1.5e-08 65.5 103 37.9
Cre07.g348500 Chlamydomonas reinhardtii HOM05D006589 ORTHO05D008350 5.5e-06 57.0 84 35.7


User provided reference genes

Program Settings