Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold154G37170 Striga asiatica HOM05D005515 ORTHO05D006620 4.8e-87 324.7 192 100.0
MSTRG.15568 Avicennia marina HOM05D005515 ORTHO05D006620 2.8e-23 112.8 106 83.0
Migut.K01462 Erythranthe guttata HOM05D005515 ORTHO05D006620 1.1e-19 100.9 104 71.2
Dinv25661 Davidia involucrata HOM05D005515 ORTHO05D006620 6.1e-18 95.1 101 63.4
Eucgr.I01648 Eucalyptus grandis HOM05D005515 ORTHO05D006620 1.4e-17 94.0 111 64.0
Sc07g0003980 Simmondsia chinensis HOM05D005515 ORTHO05D006620 4.0e-17 92.4 114 62.3
Nitab4.5_0003376g0030 Nicotiana tabacum HOM05D005515 ORTHO05D006620 5.2e-17 92.0 101 75.2
Nitab4.5_0008640g0020 Nicotiana tabacum HOM05D005515 ORTHO05D006620 5.2e-17 92.0 101 75.2
PGSC0003DMG401006926 Solanum tuberosum HOM05D005515 ORTHO05D006620 5.2e-17 92.0 91 76.9
Peaxi162Scf00881g00228 Petunia axillaris HOM05D005515 ORTHO05D006620 6.8e-17 91.7 103 71.8
Atru.chr11.2315 Acer truncatum HOM05D005515 ORTHO05D006620 1.2e-16 90.9 102 73.5
Solyc02g068110.4 Solanum lycopersicum HOM05D005515 ORTHO05D006620 2.6e-16 89.7 94 74.5
SalBow7G1491 Salvia bowleyana HOM05D005515 ORTHO05D006620 4.4e-16 89.0 115 47.8
Rhsim10G0006500 Rhododendron simsii HOM05D005515 ORTHO05D006620 5.7e-16 88.6 101 67.3
Gohir.A05G338800 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.3e-15 87.4 109 64.2
AUR62017824 Chenopodium quinoa HOM05D005515 ORTHO05D006620 2.2e-15 86.7 94 53.2
Hund04339 Selenicereus undatus HOM05D005515 ORTHO05D006620 2.2e-15 86.7 101 68.3
CSS0007323 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 2.8e-15 86.3 94 51.1
Aqoxy7G00951 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 3.7e-15 85.9 102 66.7
Dinv10962 Davidia involucrata HOM05D000504 ORTHO05D006620 3.7e-15 85.9 101 72.3
CiPaw.04G036400 Carya illinoinensis HOM05D005515 ORTHO05D006620 4.9e-15 85.5 101 51.5
Ciclev10017250m.g Citrus clementina HOM05D005515 ORTHO05D006620 4.9e-15 85.5 112 61.6
Prupe.3G305900 Prunus persica HOM05D005515 ORTHO05D006620 4.9e-15 85.5 101 68.3
GSVIVG01033096001 Vitis vinifera HOM05D005515 ORTHO05D006620 4.9e-15 85.5 112 61.6
Gohir.D04G077100 Gossypium hirsutum HOM05D005515 ORTHO05D006620 6.3e-15 85.1 101 70.3
SEGI_35944 Sequoiadendron giganteum HOM05D005515 ORTHO05D006620 6.3e-15 85.1 112 61.6
Thecc.04G035700 Theobroma cacao HOM05D005515 ORTHO05D006620 6.3e-15 85.1 112 67.0
TWI36G0725 Tripterygium wilfordii HOM05D005515 ORTHO05D006620 6.3e-15 85.1 94 71.3
EL10Ac6g15358 Beta vulgaris HOM05D005515 ORTHO05D006620 8.3e-15 84.7 112 46.4
CAN.G1300.5 Capsicum annuum HOM05D005515 ORTHO05D006620 8.3e-15 84.7 94 72.3
Ciclev10033394m.g Citrus clementina HOM05D005515 ORTHO05D006620 8.3e-15 84.7 88 77.3
Gorai.012G087000 Gossypium raimondii HOM05D005515 ORTHO05D006620 8.3e-15 84.7 102 68.6
Lalb_Chr22g0360381 Lupinus albus HOM05D005515 ORTHO05D006620 8.3e-15 84.7 104 62.5
Atru.chr6.2567 Acer truncatum HOM05D005515 ORTHO05D006620 1.1e-14 84.3 102 70.6
Cc11_g16850 Coffea canephora HOM05D005515 ORTHO05D006620 1.1e-14 84.3 101 69.3
Gohir.D07G235400 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.1e-14 84.3 101 67.3
Manes.15G160700 Manihot esculenta HOM05D005515 ORTHO05D006620 1.1e-14 84.3 101 70.3
Aqoxy5G03385 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 1.4e-14 84.0 101 66.3
Haze_14873 Corylus avellana HOM05D005515 ORTHO05D006620 1.4e-14 84.0 101 54.5
Duzib264G0697 Durio zibethinus HOM05D005515 ORTHO05D006620 1.8e-14 83.6 109 67.0
Glyma.16G056700 Glycine max HOM05D005515 ORTHO05D006620 1.8e-14 83.6 115 57.4
Oeu041666.1 Olea europaea HOM05D005515 ORTHO05D006620 1.8e-14 83.6 101 67.3
Potri.001G330400 Populus trichocarpa HOM05D005515 ORTHO05D006620 1.8e-14 83.6 101 61.4
Aqoxy2G02223 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 2.4e-14 83.2 102 64.7
Cfa009365 Carpinus fangiana HOM05D000048 ORTHO05D000445 2.4e-14 83.2 93 69.9
Glyma.19G091000 Glycine max HOM05D005515 ORTHO05D006620 2.4e-14 83.2 104 61.5
Phvul.001G093800 Phaseolus vulgaris HOM05D005515 ORTHO05D006620 2.4e-14 83.2 115 57.4
Potri.017G069200 Populus trichocarpa HOM05D005515 ORTHO05D006620 2.4e-14 83.2 103 65.0
arahy.Tifrunner.gnm1.ann1.W7YL8X Arachis hypogaea HOM05D005515 ORTHO05D006620 3.1e-14 82.8 101 68.3
arahy.Tifrunner.gnm1.ann1.Y4DWZG Arachis hypogaea HOM05D005515 ORTHO05D006620 3.1e-14 82.8 101 68.3
Gorai.001G271200 Gossypium raimondii HOM05D005515 ORTHO05D006620 4.1e-14 82.4 101 67.3
Pp3c12_14240 Physcomitrium patens HOM05D005515 ORTHO05D006620 4.1e-14 82.4 109 58.7
CANSAT11G1216 Cannabis sativa HOM05D005515 ORTHO05D006620 5.4e-14 82.0 112 56.2
Gohir.A07G228200 Gossypium hirsutum HOM05D005515 ORTHO05D006620 5.4e-14 82.0 101 67.3
PSO063G5856 Papaver somniferum HOM05D005515 ORTHO05D006620 5.4e-14 82.0 91 69.2
PSO782G3173 Papaver somniferum HOM05D005515 ORTHO05D006620 5.4e-14 82.0 91 68.1
CsaV3_6G032220 Cucumis sativus L. HOM05D005515 ORTHO05D006620 7.0e-14 81.6 101 60.4
Lsat_1_v5_gn_8_147620 Lactuca sativa HOM05D005515 ORTHO05D006620 7.0e-14 81.6 101 66.3
MD09G1011100 Malus domestica HOM05D005515 ORTHO05D006620 7.0e-14 81.6 99 55.6
Pp3c4_1860 Physcomitrium patens HOM05D005515 ORTHO05D006620 9.2e-14 81.3 101 66.3
HPP92_000347 Vanilla planifolia HOM05D005515 ORTHO05D006620 9.2e-14 81.3 102 63.7
Cpa.g.sc43.50 Carica papaya HOM05D005515 ORTHO05D006620 1.2e-13 80.9 86 73.3
TAR622G0361 Trochodendron aralioides HOM05D005515 ORTHO05D006620 1.2e-13 80.9 101 68.3
Lj1g0017105 Lotus japonicus HOM05D005515 ORTHO05D006620 1.6e-13 80.5 99 64.6
Mapoly0005s0063 Marchantia polymorpha HOM05D005515 ORTHO05D006620 2.0e-13 80.1 112 56.2
TAR374G0204 Trochodendron aralioides HOM05D005515 ORTHO05D006620 2.7e-13 79.7 115 59.1
FAN09G0415 Fragaria x ananassa HOM05D005515 ORTHO05D006620 3.5e-13 79.3 102 60.8
Psat3g175680 Pisum sativum HOM05D005515 ORTHO05D006620 3.5e-13 79.3 104 44.2
TPR.G38294 Trifolium pratense HOM05D005515 ORTHO05D006620 3.5e-13 79.3 101 45.5
FAN05G2195 Fragaria x ananassa HOM05D005515 ORTHO05D006620 4.5e-13 79.0 102 60.8
Medtr7g033490 Medicago truncatula HOM05D005515 ORTHO05D006620 4.5e-13 79.0 115 40.9
Duzib147G1212 Durio zibethinus HOM05D005515 ORTHO05D006620 5.9e-13 78.6 101 68.3
Zm00001eb364510 Zea mays HOM05D005515 ORTHO05D006620 5.9e-13 78.6 101 43.6
Sabra17G0064300 Salix brachista HOM05D005515 ORTHO05D006620 7.8e-13 78.2 114 43.9
Nn3g16471 Nelumbo nucifera HOM05D005515 ORTHO05D006620 1.0e-12 77.8 114 62.3
PGR102G1194 Punica granatum HOM05D005515 ORTHO05D006620 1.3e-12 77.4 101 64.4
Sed0013471 Sechium edule HOM05D005515 ORTHO05D006620 2.3e-12 76.6 101 45.5
THA.LOC104823981 Tarenaya hassleriana HOM05D005515 ORTHO05D006620 2.3e-12 76.6 111 59.5
FvH4_6g53480 Fragaria vesca HOM05D005515 ORTHO05D006620 2.9e-12 76.3 112 51.8
Zm00001eb143260 Zea mays HOM05D005515 ORTHO05D006620 5.0e-12 75.5 101 41.6
AL5G16230 Arabidopsis lyrata HOM05D005515 ORTHO05D006620 8.6e-12 74.7 93 62.4
Pp3c8_2660 Physcomitrium patens HOM05D005515 ORTHO05D006620 8.6e-12 74.7 109 44.0
FAN14G0031 Fragaria x ananassa HOM05D005515 ORTHO05D006620 1.1e-11 74.3 89 55.1
Manes.12G012000 Manihot esculenta HOM05D005515 ORTHO05D006620 1.1e-11 74.3 113 62.8
Os01g0920200 Oryza sativa ssp. japonica HOM05D005515 ORTHO05D006620 1.1e-11 74.3 108 52.8
FAN02G1022 Fragaria x ananassa HOM05D005515 ORTHO05D006620 1.9e-11 73.6 101 57.4
Duzib187G1157 Durio zibethinus HOM05D005515 ORTHO05D006620 2.5e-11 73.2 112 62.5
Actinidia05921 Actinidia chinensis HOM05D005515 ORTHO05D006620 7.3e-11 71.6 101 47.5
ATR1098G146 Amborella trichopoda HOM05D005515 ORTHO05D006620 1.2e-10 70.9 123 55.3
CDE02G3365 Ceratophyllum demersum HOM05D005515 ORTHO05D006620 2.8e-10 69.7 90 70.0
Migut.K00729 Erythranthe guttata HOM05D005515 ORTHO05D006620 2.8e-10 69.7 90 45.6
CARHR148320 Cardamine hirsuta HOM05D005515 ORTHO05D006620 4.7e-10 68.9 93 57.0
MSTRG.7999 Avicennia marina HOM05D005515 ORTHO05D006620 3.1e-09 66.2 107 61.7
Duzib268G1731 Durio zibethinus HOM05D005515 ORTHO05D006620 6.8e-09 65.1 94 43.6
SalBow2G3427 Salvia bowleyana HOM05D005515 ORTHO05D006620 6.8e-09 65.1 91 40.7
BcaC04g23917 Brassica carinata HOM05D005515 ORTHO05D006620 1.2e-08 64.3 93 64.5
AT3G27100 Arabidopsis thaliana HOM05D005515 ORTHO05D006620 2.0e-08 63.5 93 64.5
SMO367G0376 Selaginella moellendorffii HOM05D005515 ORTHO05D006620 2.6e-08 63.2 88 55.7
BolC9t53269H Brassica oleracea HOM05D005515 ORTHO05D006620 4.4e-08 62.4 92 64.1
A09p03280 Brassica napus HOM05D005515 ORTHO05D006620 7.5e-08 61.6 93 64.5
BraA09t35966Z Brassica rapa HOM05D005515 ORTHO05D006620 7.5e-08 61.6 122 54.9
Carub.0005s0534 Capsella rubella HOM05D005515 ORTHO05D006620 7.5e-08 61.6 91 62.6
Gohir.A05G310700 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.3e-07 60.8 86 45.3
Gorai.009G332600 Gossypium raimondii HOM05D005515 ORTHO05D006620 2.2e-07 60.1 103 40.8
unitig_8.g2909 Utricularia gibba HOM05D005515 ORTHO05D006620 2.2e-07 60.1 110 58.2
BolC7t44132H Brassica oleracea HOM05D005515 ORTHO05D006620 3.7e-07 59.3 95 47.4
Gohir.D05G311500 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.1e-06 57.8 90 42.2
Sp2g16230 Schrenkiella parvula HOM05D005515 ORTHO05D006620 1.4e-06 57.4 110 55.5
BraA06t27074Z Brassica rapa HOM05D005515 ORTHO05D006620 4.1e-06 55.8 96 58.3
Thhalv10005161m.g Eutrema salsugineum HOM05D005515 ORTHO05D006620 7.0e-06 55.1 92 58.7


User provided reference genes

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