Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold151G36753 Striga asiatica HOM05D000567 ORTHO05D000767 1.9e-75 285.8 147 100.0
SGA_v2.0_scaffold157G37406 Striga asiatica HOM05D000567 ORTHO05D000767 7.7e-53 210.7 175 70.3
SGA_v2.0_scaffold198G41101 Striga asiatica HOM05D000567 ORTHO05D000767 1.5e-48 196.4 168 68.5
MSTRG.12159 Avicennia marina HOM05D000567 ORTHO05D000767 5.4e-14 81.6 191 41.9
CSS0004820 Camellia sinensis var. sinensis HOM05D000567 ORTHO05D000767 4.5e-13 78.6 150 42.0
TAR629G2212 Trochodendron aralioides HOM05D000567 ORTHO05D000767 6.6e-12 74.7 154 40.9
TAR636G0516 Trochodendron aralioides HOM05D000567 ORTHO05D000767 1.9e-11 73.2 146 42.5
TAR374G0488 Trochodendron aralioides HOM05D000567 ORTHO05D000767 1.6e-10 70.1 147 38.1
COL.COLO4_17030 Corchorus olitorius HOM05D000567 ORTHO05D000767 2.1e-10 69.7 155 41.3
Atru.chr6.1707 Acer truncatum HOM05D000567 ORTHO05D000767 4.7e-10 68.6 158 36.7
SGA_v2.0_scaffold20G09257 Striga asiatica HOM05D000567 ORTHO05D000767 4.7e-10 68.6 169 37.9
Dinv28959 Davidia involucrata HOM05D000567 ORTHO05D000767 1.4e-09 67.0 152 39.5
SalBow6G2333 Salvia bowleyana HOM05D000567 ORTHO05D000767 1.8e-09 66.6 63 58.7
Migut.E00934 Erythranthe guttata HOM05D000567 ORTHO05D000767 2.3e-09 66.2 163 38.0
Cpa.g.sc71.72 Carica papaya HOM05D000567 ORTHO05D000767 4.0e-09 65.5 154 40.9
unitig_699.g19782 Utricularia gibba HOM05D000567 ORTHO05D000767 4.0e-09 65.5 180 36.1
MBI04_g23599_MAGBIO Magnolia biondii HOM05D000567 ORTHO05D000767 5.2e-09 65.1 158 37.3
Thecc.03G227500 Theobroma cacao HOM05D000567 ORTHO05D000767 5.2e-09 65.1 167 36.5
Aa31LG2G13350 Aethionema arabicum HOM05D000567 ORTHO05D000767 8.9e-09 64.3 169 37.3
Gohir.A08G156400 Gossypium hirsutum HOM05D000567 ORTHO05D000767 8.9e-09 64.3 166 36.1
Lj8A300T31 Lonicera japonica HOM05D000567 ORTHO05D000767 8.9e-09 64.3 174 36.2
Manes.17G016000 Manihot esculenta HOM05D000567 ORTHO05D000767 8.9e-09 64.3 156 39.1
Potri.003G092200 Populus trichocarpa HOM05D000567 ORTHO05D000767 8.9e-09 64.3 164 37.8
Sed0021616 Sechium edule HOM05D000567 ORTHO05D000767 8.9e-09 64.3 153 37.9
THA.LOC104806708 Tarenaya hassleriana HOM05D000567 ORTHO05D000767 1.2e-08 63.9 180 35.0
CSS0029111 Camellia sinensis var. sinensis HOM05D000567 ORTHO05D000767 1.5e-08 63.5 103 44.7
CSS0047466 Camellia sinensis var. sinensis HOM05D000567 ORTHO05D000767 1.5e-08 63.5 103 44.7
ClCG10G001590 Citrullus lanatus HOM05D000567 ORTHO05D000767 1.5e-08 63.5 160 37.5
MELO3C013851.2 Cucumis melo HOM05D000567 ORTHO05D000767 1.5e-08 63.5 160 37.5
Dinv25216 Davidia involucrata HOM05D000567 ORTHO05D000767 1.5e-08 63.5 154 40.3
Lj4g0009423 Lotus japonicus HOM05D000567 ORTHO05D000767 1.5e-08 63.5 157 38.2
Oeu017027.1 Olea europaea HOM05D000567 ORTHO05D000767 1.5e-08 63.5 145 38.6
Haze_08226 Corylus avellana HOM05D000567 ORTHO05D000767 2.0e-08 63.2 179 34.1
Manes.15G182700 Manihot esculenta HOM05D000567 ORTHO05D000767 2.0e-08 63.2 159 37.1
Potri.001G142200 Populus trichocarpa HOM05D000567 ORTHO05D000767 2.6e-08 62.8 160 37.5
THA.LOC104812743 Tarenaya hassleriana HOM05D000567 ORTHO05D000767 2.6e-08 62.8 168 38.1
Gorai.004G184800 Gossypium raimondii HOM05D000567 ORTHO05D000767 3.4e-08 62.4 166 35.5
CsaV3_3G001710 Cucumis sativus L. HOM05D000567 ORTHO05D000767 4.4e-08 62.0 110 42.7
Gohir.D08G176900 Gossypium hirsutum HOM05D000567 ORTHO05D000767 4.4e-08 62.0 155 36.1
VMungo0251G0761 Vigna mungo HOM05D000567 ORTHO05D000767 4.4e-08 62.0 178 37.1
Actinidia25964 Actinidia chinensis HOM05D000567 ORTHO05D000767 5.8e-08 61.6 141 41.1
Ca_22640_v3 Cicer arietinum L. HOM05D000567 ORTHO05D000767 5.8e-08 61.6 172 36.6
Solyc08g076930.1 Solanum lycopersicum HOM05D000567 ORTHO05D000767 5.8e-08 61.6 133 38.3
Sopen08g025500 Solanum pennellii HOM05D000567 ORTHO05D000767 5.8e-08 61.6 133 38.3
THA.LOC104807948 Tarenaya hassleriana HOM05D000567 ORTHO05D000767 5.8e-08 61.6 147 36.1
MSTRG.1986 Avicennia marina HOM05D000567 ORTHO05D000767 7.5e-08 61.2 119 39.5
Oeu062967.2 Olea europaea HOM05D000567 ORTHO05D000767 7.5e-08 61.2 139 38.1
BcaC05g27836 Brassica carinata HOM05D000567 ORTHO05D000767 9.8e-08 60.8 146 37.0
C05p38350 Brassica napus HOM05D000567 ORTHO05D000767 9.8e-08 60.8 146 37.0
BolC5t32569H Brassica oleracea HOM05D000567 ORTHO05D000767 9.8e-08 60.8 146 37.0
Duzib084G0664 Durio zibethinus HOM05D000567 ORTHO05D000767 9.8e-08 60.8 157 36.9
PGSC0003DMG400017535 Solanum tuberosum HOM05D000567 ORTHO05D000767 9.8e-08 60.8 124 39.5
BcaB03g12193 Brassica carinata HOM05D000567 ORTHO05D000767 1.3e-07 60.5 144 36.8
Cfa003007 Carpinus fangiana HOM05D000567 ORTHO05D000767 1.3e-07 60.5 164 36.0
Peaxi162Scf00460g00011 Petunia axillaris HOM05D000567 ORTHO05D000767 1.3e-07 60.5 157 35.0
Phvul.003G285700 Phaseolus vulgaris HOM05D000567 ORTHO05D000767 1.3e-07 60.5 177 36.7
arahy.Tifrunner.gnm1.ann1.0RH9QK Arachis hypogaea HOM05D000567 ORTHO05D000767 1.7e-07 60.1 143 36.4
arahy.Tifrunner.gnm1.ann1.D615WN Arachis hypogaea HOM05D000567 ORTHO05D000767 1.7e-07 60.1 143 36.4
CANSAT21G0209 Cannabis sativa HOM05D000567 ORTHO05D000767 2.2e-07 59.7 101 43.6
THA.LOC104812829 Tarenaya hassleriana HOM05D000567 ORTHO05D000767 2.2e-07 59.7 150 34.0
Actinidia14806 Actinidia chinensis HOM05D000567 ORTHO05D000767 2.9e-07 59.3 143 38.5
Glyma.01G018400 Glycine max HOM05D000567 ORTHO05D000767 2.9e-07 59.3 143 37.1
Glyma.01G096600 Glycine max HOM05D000567 ORTHO05D000767 2.9e-07 59.3 81 50.6
CAN.G298.8 Capsicum annuum HOM05D000567 ORTHO05D000767 3.7e-07 58.9 157 35.7
CiPaw.12G064000 Carya illinoinensis HOM05D000567 ORTHO05D000767 3.7e-07 58.9 151 37.7
Glyma.09G204500 Glycine max HOM05D000567 ORTHO05D000767 3.7e-07 58.9 142 38.0
QL12p005169 Quercus lobata HOM05D000567 ORTHO05D000767 3.7e-07 58.9 187 35.8
unitig_22.g5501 Utricularia gibba HOM05D000567 ORTHO05D000767 3.7e-07 58.9 105 39.0
BcaC07g37596 Brassica carinata HOM05D000567 ORTHO05D000767 4.9e-07 58.5 144 34.7
Thhalv10007075m.g Eutrema salsugineum HOM05D000567 ORTHO05D000767 4.9e-07 58.5 168 35.1
Lalb_Chr05g0224061 Lupinus albus HOM05D000567 ORTHO05D000767 4.9e-07 58.5 138 37.7
Nitab4.5_0001012g0020 Nicotiana tabacum HOM05D000567 ORTHO05D000767 4.9e-07 58.5 126 39.7
Nitab4.5_0001765g0050 Nicotiana tabacum HOM05D000567 ORTHO05D000767 4.9e-07 58.5 126 39.7
BolC8t47950H Brassica oleracea HOM05D000567 ORTHO05D000767 6.4e-07 58.2 144 34.7
Nitab4.5_0002539g0040 Nicotiana tabacum HOM05D000567 ORTHO05D000767 6.4e-07 58.2 120 38.3
Rhsim12G0162700 Rhododendron simsii HOM05D000567 ORTHO05D000767 6.4e-07 58.2 145 35.9
Sopen08g001070 Solanum pennellii HOM05D000567 ORTHO05D000767 6.4e-07 58.2 142 38.0
arahy.Tifrunner.gnm1.ann1.6187DS Arachis hypogaea HOM05D000567 ORTHO05D000767 8.3e-07 57.8 99 43.4
arahy.Tifrunner.gnm1.ann1.96VLZ9 Arachis hypogaea HOM05D000567 ORTHO05D000767 8.3e-07 57.8 99 43.4
BcaB03g13718 Brassica carinata HOM05D000567 ORTHO05D000767 8.3e-07 57.8 146 37.0
A05p24680 Brassica napus HOM05D000567 ORTHO05D000767 8.3e-07 57.8 146 36.3
BraA05t21352Z Brassica rapa HOM05D000567 ORTHO05D000767 8.3e-07 57.8 146 36.3
CARHR032070 Cardamine hirsuta HOM05D000567 ORTHO05D000767 8.3e-07 57.8 152 35.5
CiPaw.11G093600 Carya illinoinensis HOM05D000567 ORTHO05D000767 8.3e-07 57.8 143 38.5
Lj3g0017241 Lotus japonicus HOM05D000567 ORTHO05D000767 8.3e-07 57.8 71 53.5
Sabra03G0061600 Salix brachista HOM05D000567 ORTHO05D000767 8.3e-07 57.8 161 36.0
Nitab4.5_0000804g0160 Nicotiana tabacum HOM05D000567 ORTHO05D000767 1.1e-06 57.4 151 35.1
PSO782G1392 Papaver somniferum HOM05D000567 ORTHO05D000767 1.1e-06 57.4 153 36.6
Peaxi162Scf00045g00011 Petunia axillaris HOM05D000567 ORTHO05D000767 1.1e-06 57.4 147 34.7
Lj2P239T15 Lonicera japonica HOM05D000567 ORTHO05D000767 1.4e-06 57.0 136 35.3
PSO063G2343 Papaver somniferum HOM05D000567 ORTHO05D000767 1.4e-06 57.0 154 36.4
AT1G32640 Arabidopsis thaliana HOM05D000567 ORTHO05D000767 1.9e-06 56.6 155 35.5
Glyma.08G271900 Glycine max HOM05D000567 ORTHO05D000767 1.9e-06 56.6 162 35.2
Lj2g0027797 Lotus japonicus HOM05D000567 ORTHO05D000767 1.9e-06 56.6 143 37.1
Sabra01G0110800 Salix brachista HOM05D000567 ORTHO05D000767 1.9e-06 56.6 155 34.2
CARHR224600 Cardamine hirsuta HOM05D000567 ORTHO05D000767 2.4e-06 56.2 96 40.6
Ca_06081_v3 Cicer arietinum L. HOM05D000567 ORTHO05D000767 2.4e-06 56.2 140 36.4
Ciclev10011214m.g Citrus clementina HOM05D000567 ORTHO05D000767 2.4e-06 56.2 165 33.9
FAN08G1577 Fragaria x ananassa HOM05D000567 ORTHO05D000767 2.4e-06 56.2 173 34.7
Solyc08g005050.4 Solanum lycopersicum HOM05D000567 ORTHO05D000767 2.4e-06 56.2 157 35.7
SGA_v2.0_scaffold6G03158 Striga asiatica HOM05D000567 ORTHO05D000767 2.4e-06 56.2 169 33.7
TWI81G0935 Tripterygium wilfordii HOM05D000567 ORTHO05D000767 2.4e-06 56.2 136 38.2
Gohir.D03G171500 Gossypium hirsutum HOM05D000567 ORTHO05D000767 3.2e-06 55.8 142 33.8
Prupe.5G035400 Prunus persica HOM05D000567 ORTHO05D000767 3.2e-06 55.8 177 34.5
PGSC0003DMG400001161 Solanum tuberosum HOM05D000567 ORTHO05D000767 3.2e-06 55.8 109 38.5
THA.LOC104827760 Tarenaya hassleriana HOM05D000567 ORTHO05D000767 3.2e-06 55.8 176 32.4
Zm00001eb390330 Zea mays HOM05D000567 ORTHO05D000767 3.2e-06 55.8 154 35.7
AL1G46900 Arabidopsis lyrata HOM05D000567 ORTHO05D000767 4.1e-06 55.5 157 34.4
COL.COLO4_05294 Corchorus olitorius HOM05D000567 ORTHO05D000767 4.1e-06 55.5 48 62.5
Phvul.002G141500 Phaseolus vulgaris HOM05D000567 ORTHO05D000767 4.1e-06 55.5 161 36.0
THA.LOC104814446 Tarenaya hassleriana HOM05D000567 ORTHO05D000767 4.1e-06 55.5 84 46.4
Gorai.003G182100 Gossypium raimondii HOM05D000567 ORTHO05D000767 5.4e-06 55.1 142 33.8
Medtr8g067280 Medicago truncatula HOM05D000567 ORTHO05D000767 5.4e-06 55.1 88 42.0
Sp1g28280 Schrenkiella parvula HOM05D000567 ORTHO05D000767 5.4e-06 55.1 158 34.8
BcaB07g32956 Brassica carinata HOM05D000567 ORTHO05D000767 7.0e-06 54.7 149 36.2
FvH4_4g17280 Fragaria vesca HOM05D000567 ORTHO05D000767 7.0e-06 54.7 100 41.0
FvH4_5g22100 Fragaria vesca HOM05D000567 ORTHO05D000767 7.0e-06 54.7 177 33.9
FAN04G1775 Fragaria x ananassa HOM05D000567 ORTHO05D000767 7.0e-06 54.7 177 33.9
FAN13G0531 Fragaria x ananassa HOM05D000567 ORTHO05D000767 7.0e-06 54.7 177 33.9
FAN13G0763 Fragaria x ananassa HOM05D000567 ORTHO05D000767 7.0e-06 54.7 177 33.9
FAN18G1563 Fragaria x ananassa HOM05D000567 ORTHO05D000767 7.0e-06 54.7 177 33.9
TWI15G0875 Tripterygium wilfordii HOM05D000567 ORTHO05D000767 7.0e-06 54.7 135 35.6
TWI60G0750 Tripterygium wilfordii HOM05D000567 ORTHO05D000767 7.0e-06 54.7 133 36.1
VMungo1215G2379 Vigna mungo HOM05D000567 ORTHO05D000767 7.0e-06 54.7 133 39.8
Duzib205G1461 Durio zibethinus HOM05D000567 ORTHO05D000767 9.2e-06 54.3 167 32.9
PGR042G0932 Punica granatum HOM05D000567 ORTHO05D000767 9.2e-06 54.3 109 40.4
Rhsim07G0127300 Rhododendron simsii HOM05D000567 ORTHO05D000767 9.2e-06 54.3 150 36.0
unitig_8.g3920 Utricularia gibba HOM05D000567 ORTHO05D000767 9.2e-06 54.3 143 35.0


User provided reference genes

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