Gene: Solyc08g005050.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g005050.4
  • Transcript Identifier Solyc08g005050.4.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 48017-49909 : negative

Gene Family Information

  • ID HOM05D000567
  • #Genes/#Species 974/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g005050.4.1
  • uniprot A0A060KY90
  • gene_id Solyc08g005050

Descriptions

  • Description transcription factor MYC2 (AHRD V3.3 *-* R4S7B4_NICAT)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009269
ISO
PLAZA Integrative Orthologyresponse to desiccation AT1G32640
GO:0051090
ISO
PLAZA Integrative Orthologyregulation of DNA-binding transcription factor activity AT1G32640
GO:0051289
ISO
PLAZA Integrative Orthologyprotein homotetramerization AT1G32640
GO:2000652
ISO
PLAZA Integrative Orthologyregulation of secondary cell wall biogenesis AT4G17880
GO:0010374
ISO
PLAZA Integrative Orthologystomatal complex development AT5G46760
GO:0043619
ISO
PLAZA Integrative Orthologyregulation of transcription from RNA polymerase II promoter in response to oxidative stress AT1G32640
GO:0009963
ISO
PLAZA Integrative Orthologypositive regulation of flavonoid biosynthetic process AT1G32640
GO:0006568
ISO
PLAZA Integrative Orthologytryptophan metabolic process AT1G32640
GO:0006952
ISO
PLAZA Integrative Orthologydefense response AT5G46760
GO:0009867
ISO
PLAZA Integrative Orthologyjasmonic acid mediated signaling pathway AT1G32640
GO:0009718
ISO
PLAZA Integrative Orthologyanthocyanin-containing compound biosynthetic process AT5G46760
GO:0009759
ISO
PLAZA Integrative Orthologyindole glucosinolate biosynthetic process AT1G32640
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT1G32640
GO:2000068
ISO
PLAZA Integrative Orthologyregulation of defense response to insect AT1G32640
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT1G32640
GO:0106167
ISO
PLAZA Integrative Orthologyextracellular ATP signaling AT5G46760
GO:0010090
IMP
GOA Databasetrichome morphogenesis
GO:0006355
IBA
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0045893
IDA
GOA Databasepositive regulation of transcription, DNA-templated
GO:0042538
ISO
PLAZA Integrative Orthologyhyperosmotic salinity response AT5G46830
GO:0090357
ISO
PLAZA Integrative Orthologyregulation of tryptophan metabolic process AT1G32640
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT5G46830
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT1G32640
GO:0009753
ISO
PLAZA Integrative Orthologyresponse to jasmonic acid AT5G46760

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043425
ISO
PLAZA Integrative OrthologybHLH transcription factor binding AT5G46760
GO:0005509
ISO
PLAZA Integrative Orthologycalcium ion binding AT5G46830
GO:0019900
ISO
PLAZA Integrative Orthologykinase binding AT1G32640
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G46760
GO:0003700
IBA
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0046983
IEA
GOA Databaseprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0043565
IDA
GOA Databasesequence-specific DNA binding
GO:0000976
IBA
GOA Databasetranscription cis-regulatory region binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR045084 Transcription factor AIB/MYC-like
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR025610 Transcription factor MYC/MYB N-terminal
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)