Gene: Sopen08g025500

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g025500
  • Transcript Identifier Sopen08g025500.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 65278261-65280330 : positive

Gene Family Information

  • ID HOM05D000567
  • #Genes/#Species 974/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g025500.1

Descriptions

  • Description Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue lightñmediated photomorphogenic growth and blue and far-red-lightñregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression. | MYC2 | FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity | INVOLVED IN: in 13 processes | LOCATED IN: nucleus | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: Basic helix-loop-helix (bHLH) DNA-binding family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:2000652
ISO
PLAZA Integrative Orthologyregulation of secondary cell wall biogenesis AT4G17880
GO:0010374
ISO
PLAZA Integrative Orthologystomatal complex development AT5G46760
GO:0043619
ISO
PLAZA Integrative Orthologyregulation of transcription from RNA polymerase II promoter in response to oxidative stress AT1G32640
GO:0009963
ISO
PLAZA Integrative Orthologypositive regulation of flavonoid biosynthetic process AT1G32640
GO:0009269
ISO
PLAZA Integrative Orthologyresponse to desiccation AT1G32640
GO:0006952
ISO
PLAZA Integrative Orthologydefense response AT5G46760
GO:0009867
ISO
PLAZA Integrative Orthologyjasmonic acid mediated signaling pathway AT1G32640
GO:0009718
ISO
PLAZA Integrative Orthologyanthocyanin-containing compound biosynthetic process AT5G46760
GO:0009759
ISO
PLAZA Integrative Orthologyindole glucosinolate biosynthetic process AT1G32640
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT1G32640
GO:2000068
ISO
PLAZA Integrative Orthologyregulation of defense response to insect AT1G32640
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT1G32640
GO:0106167
ISO
PLAZA Integrative Orthologyextracellular ATP signaling AT5G46760
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated Solyc08g076930.1
GO:0051289
ISO
PLAZA Integrative Orthologyprotein homotetramerization AT1G32640
GO:0051090
ISO
PLAZA Integrative Orthologyregulation of DNA-binding transcription factor activity AT1G32640
GO:0006568
ISO
PLAZA Integrative Orthologytryptophan metabolic process AT1G32640
GO:0009753
ISO
PLAZA Integrative Orthologyresponse to jasmonic acid AT5G46760
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT1G32640
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT5G46830
GO:0090357
ISO
PLAZA Integrative Orthologyregulation of tryptophan metabolic process AT1G32640
GO:0042538
ISO
PLAZA Integrative Orthologyhyperosmotic salinity response AT5G46830
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019900
ISO
PLAZA Integrative Orthologykinase binding AT1G32640
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT5G46830
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Solyc08g076930.1
GO:0046983
IEA
InterProprotein dimerization activity
GO:0005509
ISO
PLAZA Integrative Orthologycalcium ion binding AT5G46830
GO:0043425
ISO
PLAZA Integrative OrthologybHLH transcription factor binding AT5G46760
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding Solyc08g076930.1
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT4G17880
GO:0003700
IEA
InterProDNA-binding transcription factor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G46830

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR025610 Transcription factor MYC/MYB N-terminal
IPR045084 Transcription factor AIB/MYC-like
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)