Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold146G36126 Striga asiatica HOM05D003810 ORTHO05D004416 0.0e+00 1206.8 612 100.0
MSTRG.13036 Avicennia marina HOM05D003810 ORTHO05D004416 4.7e-197 691.8 597 62.6
Oeu062684.4 Olea europaea HOM05D003810 ORTHO05D004416 1.9e-190 669.8 691 55.3
Cc00_g20590 Coffea canephora HOM05D003810 ORTHO05D004416 1.1e-188 664.1 599 60.3
CAN.G492.44 Capsicum annuum HOM05D003810 ORTHO05D004416 1.1e-185 654.1 597 59.8
Nitab4.5_0001622g0070 Nicotiana tabacum HOM05D003810 ORTHO05D004416 1.9e-185 653.3 595 59.8
Sopen10g001850 Solanum pennellii HOM05D003810 ORTHO05D004416 1.3e-183 647.1 596 59.4
Nitab4.5_0000611g0250 Nicotiana tabacum HOM05D003810 ORTHO05D004416 2.3e-183 646.4 595 59.7
Solyc10g005900.3 Solanum lycopersicum HOM05D003810 ORTHO05D004416 2.3e-183 646.4 597 59.1
Peaxi162Scf00212g00616 Petunia axillaris HOM05D003810 ORTHO05D004416 6.6e-183 644.8 591 59.4
CSS0024914 Camellia sinensis var. sinensis HOM05D003810 ORTHO05D004416 9.6e-182 641.0 598 58.9
Migut.H01729 Erythranthe guttata HOM05D003810 ORTHO05D004416 9.6e-182 641.0 591 58.7
HanXRQChr05g0160211 Helianthus annuus HOM05D003810 ORTHO05D004416 6.0e-176 621.7 595 57.0
GSVIVG01014785001 Vitis vinifera HOM05D003810 ORTHO05D004416 1.0e-175 620.9 596 56.9
Rhsim04G0009500 Rhododendron simsii HOM05D003810 ORTHO05D004416 1.5e-174 617.1 599 56.1
Dinv40895 Davidia involucrata HOM05D003810 ORTHO05D004416 1.1e-169 600.9 575 57.9
Hma1.2p1_0193F.1_g084130 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 2.7e-168 596.3 623 54.9
Gorai.001G127200 Gossypium raimondii HOM05D003810 ORTHO05D004416 2.2e-162 576.6 596 53.0
Gohir.D07G118250 Gossypium hirsutum HOM05D003810 ORTHO05D004416 2.9e-162 576.2 595 52.9
vmacro22299 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 4.2e-161 572.4 731 46.8
Thecc.09G267400 Theobroma cacao HOM05D003810 ORTHO05D004416 5.5e-161 572.0 595 52.4
Duzib150G1314 Durio zibethinus HOM05D003810 ORTHO05D004416 1.6e-160 570.5 589 53.8
Sc14g0003560 Simmondsia chinensis HOM05D003810 ORTHO05D004416 3.5e-160 569.3 599 51.8
CANSAT11G0157 Cannabis sativa HOM05D003810 ORTHO05D004416 1.8e-159 567.0 604 53.0
CsaV3_4G027560 Cucumis sativus L. HOM05D003810 ORTHO05D004416 7.4e-158 561.6 590 52.7
unitig_61.g26129 Utricularia gibba HOM05D003810 ORTHO05D004416 9.6e-158 561.2 595 53.9
ECA246G2898 Erigeron canadensis HOM05D003810 ORTHO05D004416 1.3e-157 560.8 595 52.1
SGA_v2.0_scaffold42G15939 Striga asiatica HOM05D003810 ORTHO05D004416 1.6e-157 560.5 660 49.8
Nn2g14662 Nelumbo nucifera HOM05D003810 ORTHO05D004416 2.8e-157 559.7 605 52.2
MELO3C020474.2 Cucumis melo HOM05D003810 ORTHO05D004416 4.8e-157 558.9 590 52.9
Eucgr.J01409 Eucalyptus grandis HOM05D003810 ORTHO05D004416 1.8e-156 557.0 597 52.4
Sed0019869 Sechium edule HOM05D003810 ORTHO05D004416 1.8e-156 557.0 590 52.5
Cfa016940 Carpinus fangiana HOM05D003810 ORTHO05D004416 2.4e-156 556.6 605 51.4
Actinidia00838 Actinidia chinensis HOM05D003810 ORTHO05D004416 7.6e-155 551.6 549 55.7
Haze_09895 Corylus avellana HOM05D003810 ORTHO05D004416 1.9e-153 547.0 615 50.4
DCAR_017597 Daucus carota HOM05D003810 ORTHO05D004416 2.5e-153 546.6 598 52.3
COL.COLO4_25217 Corchorus olitorius HOM05D003810 ORTHO05D004416 5.5e-153 545.4 594 50.8
QL08p001596 Quercus lobata HOM05D003810 ORTHO05D004416 2.1e-152 543.5 614 49.8
CiPaw.11G208700 Carya illinoinensis HOM05D003810 ORTHO05D004416 1.0e-151 541.2 597 50.6
AUR62017624 Chenopodium quinoa HOM05D003810 ORTHO05D004416 1.3e-151 540.8 588 52.6
PSO063G0853 Papaver somniferum HOM05D003810 ORTHO05D004416 1.3e-151 540.8 600 50.8
arahy.Tifrunner.gnm1.ann1.KKS8QY Arachis hypogaea HOM05D003810 ORTHO05D004416 1.8e-151 540.4 578 51.9
vmacro09609 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 3.9e-151 539.3 708 45.9
RcHm_v2.0_Chr7g0221221 Rosa chinensis HOM05D003810 ORTHO05D004416 1.1e-150 537.7 598 49.5
PSO782G5597 Papaver somniferum HOM05D003810 ORTHO05D004416 1.9e-150 537.0 600 50.3
Lj3A773G17 Lonicera japonica HOM05D003810 ORTHO05D004416 2.5e-150 536.6 582 52.6
Ciclev10007802m.g Citrus clementina HOM05D003810 ORTHO05D004416 4.3e-150 535.8 594 51.3
Aqoxy3G00950 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 8.2e-149 531.6 602 50.5
TPR.G13386 Trifolium pratense HOM05D003810 ORTHO05D004416 8.2e-149 531.6 590 50.8
Lj5g0018758 Lotus japonicus HOM05D003810 ORTHO05D004416 1.8e-148 530.4 595 50.6
PGR042G2745 Punica granatum HOM05D003810 ORTHO05D004416 1.8e-148 530.4 599 48.6
Atru.chr2.3847 Acer truncatum HOM05D003810 ORTHO05D004416 1.5e-147 527.3 599 51.1
Ca_10408_v3 Cicer arietinum L. HOM05D003810 ORTHO05D004416 2.0e-147 526.9 616 48.7
Lsat_1_v5_gn_1_66020 Lactuca sativa HOM05D003810 ORTHO05D004416 2.6e-147 526.6 605 50.9
ClCG04G003010 Citrullus lanatus HOM05D003810 ORTHO05D004416 5.9e-147 525.4 576 51.2
ATR0751G036 Amborella trichopoda HOM05D003810 ORTHO05D004416 2.2e-146 523.5 591 50.4
Cpa.g.sc181.12 Carica papaya HOM05D003810 ORTHO05D004416 3.8e-146 522.7 565 52.6
arahy.Tifrunner.gnm1.ann1.60T2A8 Arachis hypogaea HOM05D003810 ORTHO05D004416 6.5e-146 521.9 572 50.9
Medtr1g090110 Medicago truncatula HOM05D003810 ORTHO05D004416 3.2e-145 519.6 591 49.9
Atru.chr12.1053 Acer truncatum HOM05D003810 ORTHO05D004416 7.2e-145 518.5 595 50.1
Aqoxy2G00893 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 9.3e-145 518.1 599 49.1
Psat6g170400 Pisum sativum HOM05D003810 ORTHO05D004416 1.2e-144 517.7 587 49.7
Phvul.007G134900 Phaseolus vulgaris HOM05D003810 ORTHO05D004416 2.1e-144 516.9 592 49.8
Ah.01g013210 Amaranthus hybridus HOM05D003810 ORTHO05D004416 3.6e-144 516.2 537 54.0
VMungo0720G2836 Vigna mungo HOM05D003810 ORTHO05D004416 4.6e-144 515.8 596 49.7
Glyma.20G197500 Glycine max HOM05D003810 ORTHO05D004416 1.3e-143 514.2 595 48.9
Lj3C711T10 Lonicera japonica HOM05D003810 ORTHO05D004416 1.9e-142 510.4 482 57.7
FAN04G0096 Fragaria x ananassa HOM05D003810 ORTHO05D004416 2.5e-142 510.0 594 48.1
MBI15_g00877_MAGBIO Magnolia biondii HOM05D003810 ORTHO05D004416 2.5e-142 510.0 596 50.0
MD15G1441400 Malus domestica HOM05D003810 ORTHO05D004416 1.3e-141 507.7 590 49.7
Aa31LG10G490 Aethionema arabicum HOM05D003810 ORTHO05D004416 6.3e-141 505.4 593 48.4
Thhalv10011333m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 6.3e-141 505.4 588 48.5
THA.LOC104815683 Tarenaya hassleriana HOM05D003810 ORTHO05D004416 1.1e-140 504.6 597 48.9
AL1G63840 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 3.1e-140 503.1 596 48.8
Os08g0338200 Oryza sativa ssp. japonica HOM05D003810 ORTHO05D004416 3.1e-140 503.1 602 48.5
AUR62015172 Chenopodium quinoa HOM05D003810 ORTHO05D004416 1.2e-139 501.1 562 51.6
CARHR045410 Cardamine hirsuta HOM05D003810 ORTHO05D004416 1.5e-139 500.7 593 48.2
Carub.0001s4426 Capsella rubella HOM05D003810 ORTHO05D004416 1.0e-138 498.0 597 47.9
Prupe.1G583500 Prunus persica HOM05D003810 ORTHO05D004416 1.9e-137 493.8 604 48.0
FAN08G2973 Fragaria x ananassa HOM05D003810 ORTHO05D004416 4.2e-137 492.7 594 47.6
EL10Ac9g22878 Beta vulgaris HOM05D003810 ORTHO05D004416 6.1e-136 488.8 600 47.7
BcaB05g24435 Brassica carinata HOM05D003810 ORTHO05D004416 1.8e-135 487.3 583 47.7
CDE04G2581 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 1.8e-135 487.3 585 48.9
TWI23G0485 Tripterygium wilfordii HOM05D003810 ORTHO05D004416 5.1e-135 485.7 601 47.9
Sp5g24310 Schrenkiella parvula HOM05D003810 ORTHO05D004416 1.1e-134 484.6 583 47.5
Manes.02G224100 Manihot esculenta HOM05D003810 ORTHO05D004416 1.5e-134 484.2 545 50.1
Glyma.10G193000 Glycine max HOM05D003810 ORTHO05D004416 2.0e-134 483.8 580 49.0
Sabra07G0088100 Salix brachista HOM05D003810 ORTHO05D004416 3.3e-134 483.0 665 44.4
AT3G61420 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 2.2e-133 480.3 585 47.4
BraA02t06637Z Brassica rapa HOM05D003810 ORTHO05D004416 2.8e-133 479.9 583 47.2
A02p15760 Brassica napus HOM05D003810 ORTHO05D004416 1.1e-132 478.0 583 47.0
BcaC03g15064 Brassica carinata HOM05D003810 ORTHO05D004416 3.1e-132 476.5 584 47.3
C02p26210 Brassica napus HOM05D003810 ORTHO05D004416 3.1e-132 476.5 584 47.3
BolC2t08687H Brassica oleracea HOM05D003810 ORTHO05D004416 3.1e-132 476.5 584 47.3
FvH4_5g28910 Fragaria vesca HOM05D003810 ORTHO05D004416 3.1e-132 476.5 535 48.2
AL5G43720 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 5.3e-132 475.7 584 47.6
FAN18G3759 Fragaria x ananassa HOM05D003810 ORTHO05D004416 2.6e-131 473.4 718 40.3
Dinv10375 Davidia involucrata HOM05D003810 ORTHO05D004416 1.3e-130 471.1 577 49.6
HPP92_028601 Vanilla planifolia HOM05D003810 ORTHO05D004416 8.5e-130 468.4 592 47.6
Medtr6g071555 Medicago truncatula HOM05D003810 ORTHO05D004416 2.5e-129 466.8 588 46.6
AT1G55750 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 1.1e-124 451.4 533 48.4
Lsat_1_v5_gn_9_33460 Lactuca sativa HOM05D003810 ORTHO05D004416 2.0e-123 447.2 599 46.6
Potri.007G107400 Populus trichocarpa HOM05D003810 ORTHO05D004416 1.6e-120 437.6 540 47.8
Lj1A897G41 Lonicera japonica HOM05D003810 ORTHO05D004416 3.3e-118 429.9 403 57.6
Zm00001eb172700 Zea mays HOM05D003810 ORTHO05D004416 1.0e-114 418.3 473 49.5
Duzib168G0397 Durio zibethinus HOM05D003810 ORTHO05D004416 2.6e-110 403.7 403 54.8
Aqoxy7G03331 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 5.7e-110 402.5 483 48.4
FAN14G4445 Fragaria x ananassa HOM05D003810 ORTHO05D004416 7.7e-107 392.1 603 41.1
TAR629G3163 Trochodendron aralioides HOM05D003810 ORTHO05D004416 5.0e-106 389.4 448 50.2
Mapoly0009s0093 Marchantia polymorpha HOM05D003810 ORTHO05D004416 1.4e-103 381.3 610 39.0
Lalb_Chr06g0169751 Lupinus albus HOM05D003810 ORTHO05D004416 3.4e-102 376.7 383 53.3
TAR627G1185 Trochodendron aralioides HOM05D003810 ORTHO05D004416 1.2e-99 368.2 368 55.4
Gohir.A07G114448 Gossypium hirsutum HOM05D003810 ORTHO05D004416 1.9e-97 360.9 364 54.4
Pp3c26_14480 Physcomitrium patens HOM05D003810 ORTHO05D004416 6.4e-93 345.9 594 36.0
AagrBONN_evm.TU.Sc2ySwM_117.3105 Anthoceros agrestis HOM05D003810 ORTHO05D004416 1.6e-91 341.3 600 37.7
FvH4_6g25000 Fragaria vesca HOM05D003810 ORTHO05D004416 3.9e-90 336.7 409 46.9
CARHR219980 Cardamine hirsuta HOM05D003810 ORTHO05D004416 1.1e-84 318.5 373 50.7
Prupe.5G213500 Prunus persica HOM05D003810 ORTHO05D004416 5.4e-84 316.2 475 43.6
BcaB07g33855 Brassica carinata HOM05D003810 ORTHO05D004416 5.0e-82 309.7 565 37.7
Prupe.5G046900 Prunus persica HOM05D003810 ORTHO05D004416 2.5e-81 307.4 471 42.7
CiPaw.14G066900 Carya illinoinensis HOM05D003810 ORTHO05D004416 4.3e-81 306.6 346 49.4
Potri.005G061432 Populus trichocarpa HOM05D003810 ORTHO05D004416 1.8e-79 301.2 367 48.2
Thhalv10011448m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 1.6e-75 288.1 540 37.8
SMO228G0023 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 3.5e-75 287.0 606 33.5
BcaC08g42928 Brassica carinata HOM05D003810 ORTHO05D004416 1.5e-70 271.6 474 39.0
QL04p000617 Quercus lobata HOM05D003810 ORTHO05D004416 1.9e-68 264.6 448 41.1
FAN02G0111 Fragaria x ananassa HOM05D003810 ORTHO05D004416 6.0e-59 233.0 463 36.9
MD08G1246300 Malus domestica HOM05D003810 ORTHO05D004416 8.7e-58 229.2 226 56.2
FAN02G0356 Fragaria x ananassa HOM05D003810 ORTHO05D004416 2.2e-53 214.5 426 36.4
BolC6t35297H Brassica oleracea HOM05D003810 ORTHO05D004416 2.9e-53 214.2 306 43.8
FAN05G0299 Fragaria x ananassa HOM05D003810 ORTHO05D010162 2.9e-53 214.2 193 58.0
Gohir.A07G114432 Gossypium hirsutum HOM05D003810 ORTHO05D004416 7.1e-52 209.5 212 53.8
RcHm_v2.0_Chr2g0090241 Rosa chinensis HOM05D003810 ORTHO05D004416 7.1e-52 209.5 491 34.4
Hma1.2p1_2995F.1_g331440 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 2.7e-51 207.6 325 43.7
Lj1A897G42 Lonicera japonica HOM05D003810 ORTHO05D004416 1.3e-50 205.3 219 52.5
FAN02G2818 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.6e-48 198.4 343 37.0
Lj3g0026478 Lotus japonicus HOM05D003810 ORTHO05D004416 4.8e-48 196.8 275 44.0
Rhsim05G0134800 Rhododendron simsii HOM05D003492 ORTHO05D005115 2.0e-46 191.4 367 37.9
Potri.005G061366 Populus trichocarpa HOM05D003810 ORTHO05D004416 6.4e-45 186.4 207 49.8
FAN09G2262 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.4e-44 185.3 349 37.5
TAR627G1127 Trochodendron aralioides HOM05D003810 ORTHO05D004416 2.7e-43 181.0 182 54.4
Hma1.2p1_2995F.1_g331430 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 1.0e-42 179.1 185 54.1
SHI21694 Sapria himalayana HOM05D003810 ORTHO05D004416 5.1e-42 176.8 205 48.8
CAN.G306.2 Capsicum annuum HOM05D003810 ORTHO05D004416 8.2e-40 169.5 166 58.4
CAN.G306.3 Capsicum annuum HOM05D003810 ORTHO05D004416 3.1e-39 167.5 166 58.4
CiPaw.14G066700 Carya illinoinensis HOM05D003810 ORTHO05D004416 1.5e-38 165.2 184 47.8
Lalb_Chr06g0169761 Lupinus albus HOM05D003810 ORTHO05D004416 1.0e-37 162.5 194 45.9
Actinidia03659 Actinidia chinensis HOM05D003810 ORTHO05D004416 1.0e-34 152.5 142 54.9
Oeu005536.2 Olea europaea HOM05D003810 ORTHO05D004416 3.3e-33 147.5 164 50.0
CBR_g28523 Chara braunii HOM05D000019 ORTHO05D000002 7.4e-33 146.4 223 39.0
MD08G1246400 Malus domestica HOM05D003810 ORTHO05D004416 7.4e-33 146.4 171 48.5
HPP92_016056 Vanilla planifolia HOM05D003810 ORTHO05D004416 1.6e-32 145.2 94 73.4
SGA_v2.0_scaffold126G33829 Striga asiatica HOM05D003810 ORTHO05D004416 6.9e-31 139.8 338 35.8
ECA233G1945 Erigeron canadensis HOM05D000449 ORTHO05D003939 1.2e-30 139.0 220 41.4
CAN.G790.44 Capsicum annuum HOM05D000872 ORTHO05D000777 8.8e-26 122.9 176 44.9
Hund17709 Selenicereus undatus HOM05D003810 ORTHO05D004416 9.1e-23 112.8 213 37.1
CAN.G312.5 Capsicum annuum HOM05D003810 ORTHO05D000001 2.6e-22 111.3 141 47.5
CAN.G1057.19 Capsicum annuum HOM05D000222 ORTHO05D004416 5.5e-20 103.6 73 69.9
CAN.G1328.7 Capsicum annuum HOM05D003810 ORTHO05D004416 5.5e-20 103.6 72 70.8
CAN.G289.45 Capsicum annuum HOM05D002177 ORTHO05D004416 6.1e-19 100.1 76 64.5
QL12p013194 Quercus lobata HOM05D003810 ORTHO05D004416 1.4e-18 99.0 202 36.6
TPR.G30194 Trifolium pratense HOM05D003810 ORTHO05D004416 1.4e-18 99.0 183 37.2
PRCOL_00004489 Prasinoderma coloniale HOM05D003810 ORTHO05D004416 3.3e-17 94.4 651 23.2
SMO031G0001 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 3.5e-14 84.3 124 37.9
SHI21692 Sapria himalayana HOM05D003810 ORTHO05D004416 4.5e-14 84.0 113 38.9
CAN.G11.19 Capsicum annuum HOM05D003810 ORTHO05D004416 6.5e-13 80.1 56 66.1
SalBow3G3831 Salvia bowleyana HOM05D003810 ORTHO05D004416 1.4e-12 79.0 116 43.1
CDE07G1690 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 1.2e-11 75.9 138 37.0
TAR629G2180 Trochodendron aralioides HOM05D003810 ORTHO05D004416 2.7e-11 74.7 65 60.0
CAN.G479.68 Capsicum annuum HOM05D000222 ORTHO05D004387 8.0e-11 73.2 53 64.2
SHI21696 Sapria himalayana HOM05D003810 ORTHO05D004416 5.7e-09 67.0 93 44.1
CAN.G1034.2 Capsicum annuum HOM05D000222 ORTHO05D011077 7.4e-09 66.6 204 28.9
Nitab4.5_0001303g0160 Nicotiana tabacum HOM05D003810 ORTHO05D004416 7.4e-09 66.6 174 32.2
CAN.G1077.9 Capsicum annuum HOM05D000222 ORTHO05D012343 9.7e-09 66.2 137 38.7
Actinidia36698 Actinidia chinensis HOM05D004019 ORTHO05D005136 2.8e-08 64.7 173 33.5
Hund17711 Selenicereus undatus HOM05D003810 ORTHO05D004416 4.8e-08 63.9 43 69.8
ClCG09G022970 Citrullus lanatus HOM05D003810 ORTHO05D004416 8.2e-08 63.2 51 64.7
CAN.G523.5 Capsicum annuum HOM05D000222 ORTHO05D012343 5.3e-07 60.5 63 49.2
TPR.G30768 Trifolium pratense HOM05D003810 ORTHO05D004416 3.5e-06 57.8 43 67.4
SalBow3G0229 Salvia bowleyana HOM05D003810 ORTHO05D004416 5.9e-06 57.0 99 35.4
MCO14G434 Micromonas commoda HOM05D003810 ORTHO05D004416 7.7e-06 56.6 710 21.1


User provided reference genes

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