Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold144G35876 Striga asiatica HOM05D006835 ORTHO05D008587 2.1e-74 283.5 327 100.0
Oeu034382.1 Olea europaea HOM05D006835 ORTHO05D008587 1.2e-45 188.0 324 80.6
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 1.1e-43 181.4 325 78.5
MSTRG.1776 Avicennia marina HOM05D006835 ORTHO05D008587 1.6e-42 177.6 325 82.5
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 1.4e-41 174.5 317 78.5
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 2.0e-40 170.6 324 77.2
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 9.7e-40 168.3 323 79.6
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 9.7e-40 168.3 325 77.2
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 1.3e-39 167.9 323 62.8
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 1.3e-39 167.9 326 77.3
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 1.7e-39 167.5 323 79.9
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 3.7e-39 166.4 318 78.3
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 8.2e-39 165.2 323 80.2
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 4.1e-38 162.9 317 80.4
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 2.0e-37 160.6 325 77.5
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 2.6e-37 160.2 326 78.5
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 3.5e-37 159.8 328 76.8
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 4.5e-37 159.5 323 77.7
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 5.9e-37 159.1 322 66.1
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 5.9e-37 159.1 330 76.7
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 2.9e-36 156.8 317 80.1
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 2.9e-36 156.8 317 80.1
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 3.8e-36 156.4 326 77.9
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 1.9e-35 154.1 315 78.7
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 2.5e-35 153.7 325 78.8
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 3.2e-35 153.3 325 75.1
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 3.2e-35 153.3 331 76.1
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 4.2e-35 152.9 326 76.7
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 7.2e-35 152.1 326 77.6
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 7.2e-35 152.1 326 77.3
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 1.2e-34 151.4 324 77.5
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 1.6e-34 151.0 318 77.0
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 2.1e-34 150.6 325 71.7
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 2.1e-34 150.6 318 77.7
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 3.6e-34 149.8 325 74.5
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 3.6e-34 149.8 324 76.5
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 3.6e-34 149.8 328 75.9
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 3.6e-34 149.8 322 76.4
arahy.Tifrunner.gnm1.ann1.9A9DF4 Arachis hypogaea HOM05D006835 ORTHO05D008587 8.0e-34 148.7 327 77.1
arahy.Tifrunner.gnm1.ann1.N15UBW Arachis hypogaea HOM05D006835 ORTHO05D008587 8.0e-34 148.7 327 77.1
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 1.0e-33 148.3 325 74.2
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 1.4e-33 147.9 326 73.3
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 1.8e-33 147.5 327 68.2
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 2.3e-33 147.1 327 68.5
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 2.3e-33 147.1 317 73.5
Actinidia17982 Actinidia chinensis HOM05D006835 ORTHO05D008587 3.0e-33 146.7 318 75.8
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 4.0e-33 146.4 318 75.8
Psat7g128400 Pisum sativum HOM05D006835 ORTHO05D008587 8.8e-33 145.2 327 73.7
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 8.8e-33 145.2 315 77.5
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 2.0e-32 144.1 320 70.3
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 2.0e-32 144.1 325 70.8
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 3.3e-32 143.3 323 77.1
Ca_18740_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 9.7e-32 141.7 327 75.8
Ca_30877_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 9.7e-32 141.7 327 75.8
Medtr4g084630 Medicago truncatula HOM05D006835 ORTHO05D008587 9.7e-32 141.7 321 73.8
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 1.7e-31 141.0 323 76.5
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 2.2e-31 140.6 323 77.4
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 2.8e-31 140.2 326 77.6
Glyma.13G141500 Glycine max HOM05D006835 ORTHO05D008587 3.7e-31 139.8 324 76.2
Potri.009G170300 Populus trichocarpa HOM05D006835 ORTHO05D008587 3.7e-31 139.8 318 77.4
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 4.8e-31 139.4 326 77.6
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 8.2e-31 138.7 323 73.7
Atru.BG.81.p Acer truncatum HOM05D006835 ORTHO05D008587 1.4e-30 137.9 312 79.5
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 1.8e-30 137.5 318 77.4
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 1.8e-30 137.5 318 77.4
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 1.8e-30 137.5 325 67.4
Sc08g0001990 Simmondsia chinensis HOM05D006835 ORTHO05D008587 9.1e-30 135.2 327 72.2
Phvul.007G148200 Phaseolus vulgaris HOM05D006835 ORTHO05D008587 7.7e-29 132.1 323 74.3
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 2.9e-28 130.2 325 44.3
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 3.8e-28 129.8 324 72.8
EL10Ac9g21569 Beta vulgaris HOM05D006835 ORTHO05D008587 6.5e-28 129.0 324 71.3
PSO541G0957 Papaver somniferum HOM05D006835 ORTHO05D008587 8.5e-28 128.6 322 77.0
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 1.1e-27 128.3 322 66.5
Ah.01g010510 Amaranthus hybridus HOM05D006835 ORTHO05D008587 1.5e-27 127.9 324 73.1
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 9.4e-27 125.2 324 71.0
CARHR293940 Cardamine hirsuta HOM05D006835 ORTHO05D008587 4.7e-26 122.9 318 64.5
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 8.0e-26 122.1 325 72.9
TAR381G0995 Trochodendron aralioides HOM05D006835 ORTHO05D008587 1.4e-25 121.3 83 65.1
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 1.8e-25 120.9 368 60.3
AUR62010216 Chenopodium quinoa HOM05D006835 ORTHO05D008587 1.2e-24 118.2 327 69.7
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 1.2e-24 118.2 327 69.7
DCAR_006210 Daucus carota HOM05D006835 ORTHO05D008587 1.2e-24 118.2 318 65.4
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 2.0e-24 117.5 323 61.6
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 2.6e-24 117.1 324 60.5
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 9.8e-24 115.2 318 62.6
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 1.3e-23 114.8 322 60.9
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 2.2e-23 114.0 322 67.4
Lsat_1_v5_gn_8_70721 Lactuca sativa HOM05D006835 ORTHO05D008587 2.8e-23 113.6 309 73.5
Glyma.10G054400 Glycine max HOM05D006835 ORTHO05D008587 4.8e-23 112.8 82 57.3
MD05G1145000 Malus domestica HOM05D006835 ORTHO05D008587 6.3e-23 112.5 296 77.0
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 1.1e-22 111.7 322 62.1
FAN15G1646 Fragaria x ananassa HOM05D006835 ORTHO05D008587 7.0e-22 109.0 80 61.2
VMungo1309G0603 Vigna mungo HOM05D006835 ORTHO05D008587 7.0e-22 109.0 75 57.3
Ah.02g121760 Amaranthus hybridus HOM05D006835 ORTHO05D008587 1.6e-21 107.8 87 54.0
C07p46880 Brassica napus HOM05D006835 ORTHO05D008587 7.7e-21 105.5 326 66.3
BolC7t45204H Brassica oleracea HOM05D006835 ORTHO05D008587 7.7e-21 105.5 326 66.3
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 7.7e-21 105.5 328 67.7
SalBow3G3248 Salvia bowleyana HOM05D006835 ORTHO05D008587 1.7e-20 104.4 325 70.2
A03p48790 Brassica napus HOM05D006835 ORTHO05D008587 2.2e-20 104.0 326 66.3
BraA03t13979Z Brassica rapa HOM05D006835 ORTHO05D008587 5.0e-20 102.8 326 66.0
ClCG02G010730 Citrullus lanatus HOM05D006835 ORTHO05D008587 5.5e-19 99.4 85 52.9
SalBow8G1833 Salvia bowleyana HOM05D006835 ORTHO05D008587 7.2e-19 99.0 63 66.7
SalBow4G0758 Salvia bowleyana HOM05D006835 ORTHO05D008587 4.7e-18 96.3 325 69.2
CDE04G0383 Ceratophyllum demersum HOM05D006835 ORTHO05D008587 8.0e-18 95.5 313 51.4
CSS0014591 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 2.3e-17 94.0 277 77.6
CSS0013930 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 8.8e-17 92.0 58 70.7
Os08g0515800 Oryza sativa ssp. japonica HOM05D006835 ORTHO05D008587 6.3e-15 85.9 58 65.5
TAR381G1325 Trochodendron aralioides HOM05D006835 ORTHO05D008587 4.1e-14 83.2 56 62.5
vmacro17000 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 1.6e-13 81.3 82 46.3
HPP92_022026 Vanilla planifolia HOM05D006835 ORTHO05D008587 1.6e-13 81.3 58 62.1
SEGI_34779 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 3.5e-13 80.1 58 56.9
AagrBONN_evm.TU.Sc2ySwM_344.3279 Anthoceros agrestis HOM05D006835 ORTHO05D008587 4.4e-08 63.2 81 37.0
Mapoly0015s0200 Marchantia polymorpha HOM05D006835 ORTHO05D008587 4.4e-08 63.2 86 33.7
Solyc03g124040.3 Solanum lycopersicum HOM05D005956 ORTHO05D007197 2.9e-07 60.5 55 43.6
CAN.G790.4 Capsicum annuum HOM05D005956 ORTHO05D007197 3.7e-07 60.1 55 43.6
FAN09G1770 Fragaria x ananassa HOM05D005956 ORTHO05D007197 3.7e-07 60.1 54 44.4
PGSC0003DMG400009194 Solanum tuberosum HOM05D005956 ORTHO05D007197 3.7e-07 60.1 55 43.6
FvH4_4g20570 Fragaria vesca HOM05D005956 ORTHO05D006468 6.4e-07 59.3 54 44.4
Actinidia20590 Actinidia chinensis HOM05D006835 ORTHO05D008587 8.3e-07 58.9 38 65.8
Nitab4.5_0005679g0020 Nicotiana tabacum HOM05D005956 ORTHO05D007197 8.3e-07 58.9 55 45.5
PGR083G0114 Punica granatum HOM05D005956 ORTHO05D007197 8.3e-07 58.9 54 44.4
FvH4_6g36600 Fragaria vesca HOM05D005956 ORTHO05D007197 1.1e-06 58.5 54 42.6
FAN02G1317 Fragaria x ananassa HOM05D005956 ORTHO05D007197 1.1e-06 58.5 54 42.6
FAN14G1696 Fragaria x ananassa HOM05D005956 ORTHO05D007197 1.1e-06 58.5 54 42.6
Nitab4.5_0000499g0110 Nicotiana tabacum HOM05D005956 ORTHO05D007197 1.4e-06 58.2 55 43.6
SEGI_18890 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 1.4e-06 58.2 42 57.1
Duzib192G0068 Durio zibethinus HOM05D005956 ORTHO05D007197 1.8e-06 57.8 56 39.3
Sopen03g041770 Solanum pennellii HOM05D005956 ORTHO05D007197 1.8e-06 57.8 55 41.8
Actinidia21896 Actinidia chinensis HOM05D005956 ORTHO05D007197 2.4e-06 57.4 54 42.6
Manes.14G006900 Manihot esculenta HOM05D005956 ORTHO05D007197 3.2e-06 57.0 55 41.8
arahy.Tifrunner.gnm1.ann1.XHCR8J Arachis hypogaea HOM05D005956 ORTHO05D007197 4.1e-06 56.6 54 40.7
AUR62034384 Chenopodium quinoa HOM05D002901 ORTHO05D003183 4.1e-06 56.6 53 45.3
Rhsim08G0251500 Rhododendron simsii HOM05D005956 ORTHO05D007197 4.1e-06 56.6 55 45.5
Dinv08767 Davidia involucrata HOM05D005956 ORTHO05D007197 5.4e-06 56.2 54 40.7
AT1G78930 Arabidopsis thaliana HOM05D005956 ORTHO05D007197 7.0e-06 55.8 54 42.6
Cc07_g21430 Coffea canephora HOM05D005956 ORTHO05D007197 7.0e-06 55.8 56 39.3
Peaxi162Scf00038g02615 Petunia axillaris HOM05D005956 ORTHO05D007197 7.0e-06 55.8 55 41.8
CSS0006169 Camellia sinensis var. sinensis HOM05D002901 ORTHO05D003183 9.2e-06 55.5 53 43.4
DCAR_030820 Daucus carota HOM05D005956 ORTHO05D007197 9.2e-06 55.5 54 44.4


User provided reference genes

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