Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold135G34914 Striga asiatica HOM05D001715 ORTHO05D004824 2.1e-113 412.5 237 100.0
SGA_v2.0_scaffold18G08270 Striga asiatica HOM05D001715 ORTHO05D004824 4.0e-51 205.7 139 83.5
Migut.H00070 Erythranthe guttata HOM05D001715 ORTHO05D004824 7.5e-50 201.4 133 81.2
MSTRG.24047 Avicennia marina HOM05D001715 ORTHO05D004824 6.6e-46 188.3 133 77.4
Dinv33423 Davidia involucrata HOM05D001715 ORTHO05D004824 1.5e-45 187.2 133 73.7
Lsat_1_v5_gn_4_184360 Lactuca sativa HOM05D001715 ORTHO05D004824 2.5e-45 186.4 133 73.7
unitig_748.g6979 Utricularia gibba HOM05D001715 ORTHO05D004824 3.3e-45 186.0 133 73.7
HanXRQChr15g0486831 Helianthus annuus HOM05D001715 ORTHO05D004824 4.3e-45 185.7 133 72.9
Hma1.2p1_1747F.1_g300590 Hydrangea macrophylla HOM05D001715 ORTHO05D004824 5.6e-45 185.3 131 73.3
Cc07_g00030 Coffea canephora HOM05D001715 ORTHO05D004824 2.1e-44 183.3 133 73.7
Dinv25723 Davidia involucrata HOM05D001715 ORTHO05D004510 2.1e-44 183.3 133 73.7
Nitab4.5_0001562g0140 Nicotiana tabacum HOM05D001715 ORTHO05D004824 6.1e-44 181.8 133 72.9
HanXRQChr09g0255491 Helianthus annuus HOM05D001715 ORTHO05D004824 1.8e-43 180.3 134 70.9
Lju41A43T27 Lonicera japonica HOM05D001715 ORTHO05D004824 2.3e-43 179.9 132 70.5
MSTRG.3136 Avicennia marina HOM05D001715 ORTHO05D004824 4.0e-43 179.1 133 74.4
Peaxi162Scf00420g00131 Petunia axillaris HOM05D001715 ORTHO05D004824 4.0e-43 179.1 131 72.5
CANSAT64G1664 Cannabis sativa HOM05D001715 ORTHO05D004824 6.8e-43 178.3 133 70.7
PGSC0003DMG400012610 Solanum tuberosum HOM05D001715 ORTHO05D004824 6.8e-43 178.3 133 71.4
Manes.15G152100 Manihot esculenta HOM05D001715 ORTHO05D004824 1.2e-42 177.6 133 70.7
Manes.17G110800 Manihot esculenta HOM05D001715 ORTHO05D004824 1.5e-42 177.2 133 71.4
CSS0010910 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 2.0e-42 176.8 133 69.2
Solyc02g093490.3 Solanum lycopersicum HOM05D001715 ORTHO05D004824 4.4e-42 175.6 133 69.9
Nitab4.5_0006683g0120 Nicotiana tabacum HOM05D001715 ORTHO05D004824 5.8e-42 175.3 133 69.9
AT3G27460 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 1.7e-41 173.7 131 71.0
DCAR_015064 Daucus carota HOM05D001715 ORTHO05D004824 1.7e-41 173.7 131 64.9
AL5G16870 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 2.2e-41 173.3 133 71.4
Sopen02g038180 Solanum pennellii HOM05D001715 ORTHO05D004824 2.9e-41 172.9 132 68.9
THA.LOC104825315 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 3.7e-41 172.6 135 69.6
Cpa.g.sc108.80 Carica papaya HOM05D001715 ORTHO05D004824 6.4e-41 171.8 131 69.5
SGA_v2.0_scaffold45G16985 Striga asiatica HOM05D001383 ORTHO05D000309 8.3e-41 171.4 106 99.1
Aa31LG2G5160 Aethionema arabicum HOM05D001715 ORTHO05D004824 1.1e-40 171.0 129 69.8
CARHR148830 Cardamine hirsuta HOM05D001715 ORTHO05D004824 1.1e-40 171.0 132 71.2
MD17G1021800 Malus domestica HOM05D001715 ORTHO05D004824 1.4e-40 170.6 136 67.6
Cfa007336 Carpinus fangiana HOM05D001715 ORTHO05D004824 1.9e-40 170.2 133 69.2
Sp2g16670 Schrenkiella parvula HOM05D001715 ORTHO05D004824 1.9e-40 170.2 130 70.0
Actinidia36126 Actinidia chinensis HOM05D001715 ORTHO05D004824 2.4e-40 169.9 133 67.7
CAN.G473.27 Capsicum annuum HOM05D001715 ORTHO05D004824 2.4e-40 169.9 133 66.9
COL.COLO4_29175 Corchorus olitorius HOM05D001715 ORTHO05D004824 2.4e-40 169.9 133 66.9
Thhalv10004728m.g Eutrema salsugineum HOM05D001715 ORTHO05D004824 2.4e-40 169.9 133 69.2
Potri.001G342700 Populus trichocarpa HOM05D001715 ORTHO05D004824 2.4e-40 169.9 133 67.7
THA.LOC104805361 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 3.2e-40 169.5 135 68.1
Actinidia05979 Actinidia chinensis HOM05D001715 ORTHO05D004824 5.4e-40 168.7 133 66.9
BcaC06g33817 Brassica carinata HOM05D001715 ORTHO05D004824 5.4e-40 168.7 131 67.9
Carub.0005s0587 Capsella rubella HOM05D001715 ORTHO05D004824 5.4e-40 168.7 133 70.7
FAN19G0324 Fragaria x ananassa HOM05D001715 ORTHO05D004824 5.4e-40 168.7 133 66.2
SGA_v2.0_scaffold364G49972 Striga asiatica HOM05D001383 ORTHO05D000309 5.4e-40 168.7 106 97.2
Duzib147G1449 Durio zibethinus HOM05D001715 ORTHO05D004824 7.0e-40 168.3 133 66.2
Lj1g0020864 Lotus japonicus HOM05D001715 ORTHO05D004824 7.0e-40 168.3 129 65.9
SGA_v2.0_scaffold4913G54564 Striga asiatica HOM05D001383 ORTHO05D000309 7.0e-40 168.3 105 98.1
SGA_v2.0_scaffold88G27322 Striga asiatica HOM05D002720 ORTHO05D002901 7.0e-40 168.3 105 98.1
SGA_v2.0_scaffold51G18897 Striga asiatica HOM05D001383 ORTHO05D000309 9.2e-40 167.9 104 98.1
FAN23G2554 Fragaria x ananassa HOM05D001715 ORTHO05D004824 1.2e-39 167.5 133 66.2
Glyma.16G069000 Glycine max HOM05D001715 ORTHO05D004824 1.2e-39 167.5 133 64.7
Gohir.D11G070100 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.7e-39 166.4 133 65.4
Gorai.007G075200 Gossypium raimondii HOM05D001715 ORTHO05D004824 2.7e-39 166.4 133 65.4
Phvul.001G096400 Phaseolus vulgaris HOM05D001715 ORTHO05D004824 2.7e-39 166.4 135 63.0
A06p41160 Brassica napus HOM05D001715 ORTHO05D003849 3.5e-39 166.0 133 66.9
BraA06t27038Z Brassica rapa HOM05D001715 ORTHO05D004824 3.5e-39 166.0 133 66.9
Gohir.A07G224000 Gossypium hirsutum HOM05D001715 ORTHO05D004824 3.5e-39 166.0 133 64.7
Gohir.D07G231300 Gossypium hirsutum HOM05D001715 ORTHO05D004824 3.5e-39 166.0 133 64.7
Gorai.001G266400 Gossypium raimondii HOM05D001715 ORTHO05D004824 3.5e-39 166.0 133 64.7
Atru.chr6.2434 Acer truncatum HOM05D001715 ORTHO05D004824 4.6e-39 165.6 134 65.7
Lalb_Chr22g0360701 Lupinus albus HOM05D001715 ORTHO05D004824 4.6e-39 165.6 134 64.9
Medtr7g033200 Medicago truncatula HOM05D001715 ORTHO05D004824 4.6e-39 165.6 171 53.8
TWI12G0217 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 4.6e-39 165.6 135 65.9
CiPaw.03G045800 Carya illinoinensis HOM05D001715 ORTHO05D004824 6.0e-39 165.2 133 64.7
FvH4_1g25240 Fragaria vesca HOM05D001715 ORTHO05D004824 6.0e-39 165.2 132 64.4
Lalb_Chr24g0403561 Lupinus albus HOM05D001715 ORTHO05D004824 6.0e-39 165.2 134 64.9
BcaC06g30988 Brassica carinata HOM05D001715 ORTHO05D004824 7.8e-39 164.9 133 66.9
C07p36500 Brassica napus HOM05D001715 ORTHO05D003849 7.8e-39 164.9 133 66.9
BolC7t44170H Brassica oleracea HOM05D001715 ORTHO05D004824 7.8e-39 164.9 133 66.9
vmacro07988 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 7.8e-39 164.9 148 64.2
Duzib264G0165 Durio zibethinus HOM05D001715 ORTHO05D004824 1.3e-38 164.1 133 63.9
Gohir.A11G065900 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.3e-38 164.1 133 63.9
Psat3g166200 Pisum sativum HOM05D001715 ORTHO05D004824 1.7e-38 163.7 172 52.9
TPR.G1113 Trifolium pratense HOM05D001715 ORTHO05D004824 1.7e-38 163.7 171 52.6
MD09G1022400 Malus domestica HOM05D001715 ORTHO05D004824 2.3e-38 163.3 132 65.9
Thecc.04G019800 Theobroma cacao HOM05D001715 ORTHO05D004824 2.3e-38 163.3 133 64.7
TWI12G0372 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 2.3e-38 163.3 135 65.2
FAN28G2154 Fragaria x ananassa HOM05D001715 ORTHO05D004824 3.0e-38 162.9 133 65.4
Prupe.3G294200 Prunus persica HOM05D001715 ORTHO05D004824 3.0e-38 162.9 133 66.2
TWI12G0250 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 3.0e-38 162.9 135 64.4
TWI12G0380 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 3.0e-38 162.9 135 64.4
CARHR261430 Cardamine hirsuta HOM05D001715 ORTHO05D004824 3.9e-38 162.5 132 65.9
Glyma.19G055900 Glycine max HOM05D001715 ORTHO05D004824 3.9e-38 162.5 135 63.7
PGR083G0973 Punica granatum HOM05D001715 ORTHO05D004824 3.9e-38 162.5 133 63.9
QL05p032480 Quercus lobata HOM05D001715 ORTHO05D004824 3.9e-38 162.5 133 63.2
QL05p033603 Quercus lobata HOM05D001715 ORTHO05D004824 3.9e-38 162.5 133 63.2
Ciclev10016259m.g Citrus clementina HOM05D001715 ORTHO05D004824 5.0e-38 162.2 129 65.1
RcHm_v2.0_Chr2g0123161 Rosa chinensis HOM05D001715 ORTHO05D004824 5.0e-38 162.2 133 66.9
AT5G40550 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 6.6e-38 161.8 134 66.4
Carub.0007s3497 Capsella rubella HOM05D001715 ORTHO05D004824 8.6e-38 161.4 136 65.4
AL7G49260 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 1.9e-37 160.2 136 64.7
VMungo1383G3508 Vigna mungo HOM05D001715 ORTHO05D004824 1.9e-37 160.2 134 61.2
Ca_10003_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 2.5e-37 159.8 174 52.9
Rhsim10G0014300 Rhododendron simsii HOM05D001715 ORTHO05D004824 2.5e-37 159.8 133 66.2
MD17G1021900 Malus domestica HOM05D001715 ORTHO05D004824 4.3e-37 159.1 132 65.2
PGR142G0496 Punica granatum HOM05D001715 ORTHO05D004824 5.6e-37 158.7 183 51.4
Duzib187G0323 Durio zibethinus HOM05D001715 ORTHO05D004824 1.2e-36 157.5 133 63.2
Sabra16G0222300 Salix brachista HOM05D001715 ORTHO05D004824 1.6e-36 157.1 151 57.6
SGA_v2.0_scaffold25G11077 Striga asiatica HOM05D001383 ORTHO05D000309 2.1e-36 156.8 96 100.0
Lj7A601T103 Lonicera japonica HOM05D001715 ORTHO05D004824 3.6e-36 156.0 133 58.6
FAN26G1929 Fragaria x ananassa HOM05D001715 ORTHO05D004824 4.7e-36 155.6 147 59.2
Gorai.012G065400 Gossypium raimondii HOM05D001715 ORTHO05D004824 4.7e-36 155.6 133 60.9
Gohir.D04G058700 Gossypium hirsutum HOM05D001715 ORTHO05D004824 6.2e-36 155.2 133 61.7
SGA_v2.0_scaffold89G27595 Striga asiatica HOM05D001383 ORTHO05D000309 1.1e-35 154.5 101 95.0
arahy.Tifrunner.gnm1.ann1.VP8W98 Arachis hypogaea HOM05D001715 ORTHO05D004824 1.4e-35 154.1 132 62.1
Gohir.A05G354400 Gossypium hirsutum HOM05D001715 ORTHO05D004824 3.1e-35 152.9 133 60.9
GSVIVG01032368001 Vitis vinifera HOM05D001715 ORTHO05D004824 8.9e-35 151.4 145 59.3
Ah.02g128230 Amaranthus hybridus HOM05D001715 ORTHO05D004824 1.5e-34 150.6 132 60.6
SHI03767 Sapria himalayana HOM05D001715 ORTHO05D004824 2.6e-34 149.8 133 57.9
arahy.Tifrunner.gnm1.ann1.Q5RJ9B Arachis hypogaea HOM05D001715 ORTHO05D004824 4.4e-34 149.1 134 61.2
Hund15533 Selenicereus undatus HOM05D001715 ORTHO05D004824 4.4e-34 149.1 132 60.6
THA.LOC104823958 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 7.5e-34 148.3 131 61.8
Ca_12396_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 9.8e-34 147.9 205 44.9
C02p54210 Brassica napus HOM05D001715 ORTHO05D003849 1.3e-33 147.5 128 61.7
A02p35490 Brassica napus HOM05D001715 ORTHO05D003849 3.7e-33 146.0 129 59.7
TAR374G1502 Trochodendron aralioides HOM05D001715 ORTHO05D004824 4.9e-33 145.6 135 59.3
Eucgr.J02260 Eucalyptus grandis HOM05D001715 ORTHO05D004824 1.1e-32 144.4 133 60.2
BolC2t11484H Brassica oleracea HOM05D001715 ORTHO05D004824 3.2e-32 142.9 141 56.7
TAR622G0120 Trochodendron aralioides HOM05D001715 ORTHO05D004824 7.1e-32 141.7 136 58.8
MBI11_g21317_MAGBIO Magnolia biondii HOM05D001715 ORTHO05D004824 4.6e-31 139.0 135 59.3
PSO063G0233 Papaver somniferum HOM05D001715 ORTHO05D004824 1.0e-30 137.9 135 56.3
PSO754G0079 Papaver somniferum HOM05D001715 ORTHO05D004824 1.0e-30 137.9 135 56.3
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 1.0e-30 137.9 134 61.2
ClCG10G013770 Citrullus lanatus HOM05D001715 ORTHO05D004824 1.7e-30 137.1 133 60.2
Aqoxy5G03737 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 3.0e-30 136.3 136 55.9
CsaV3_3G042890 Cucumis sativus L. HOM05D001715 ORTHO05D004824 3.9e-30 136.0 133 58.6
Haze_14762 Corylus avellana HOM05D001715 ORTHO05D004824 6.6e-30 135.2 192 46.4
MELO3C026589.2 Cucumis melo HOM05D001715 ORTHO05D004824 1.1e-29 134.4 132 59.1
Os12g0290600 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D004824 7.3e-29 131.7 130 56.9
AUR62033204 Chenopodium quinoa HOM05D001715 ORTHO05D004824 1.6e-28 130.6 143 54.5
CDE04G1703 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 2.1e-28 130.2 134 53.0
Sed0015141 Sechium edule HOM05D001715 ORTHO05D004824 2.1e-28 130.2 133 57.1
BraA02t08550Z Brassica rapa HOM05D001715 ORTHO05D003849 2.8e-28 129.8 154 50.0
CDE07G0729 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 6.2e-28 128.6 134 53.0
vmacro18298 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 3.1e-27 126.3 151 49.0
HPP92_019596 Vanilla planifolia HOM05D001715 ORTHO05D004824 3.1e-27 126.3 135 51.9
ATR0824G003 Amborella trichopoda HOM05D001715 ORTHO05D004824 8.9e-27 124.8 137 56.2
Oeu035801.2 Olea europaea HOM05D001715 ORTHO05D004824 1.5e-26 124.0 97 68.0
QL02p073949 Quercus lobata HOM05D001715 ORTHO05D004824 2.0e-26 123.6 239 37.7
BcaB07g30155 Brassica carinata HOM05D001715 ORTHO05D004824 9.9e-26 121.3 131 55.0
Rhsim08G0048300 Rhododendron simsii HOM05D001715 ORTHO05D004824 6.4e-25 118.6 170 44.1
Zm00001eb409000 Zea mays HOM05D001715 ORTHO05D004824 6.4e-25 118.6 130 46.9
vmacro18296 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 1.9e-24 117.1 133 48.9
SGA_v2.0_scaffold104G30162 Striga asiatica HOM05D001383 ORTHO05D000309 3.2e-24 116.3 87 86.2
BcaC03g17465 Brassica carinata HOM05D001715 ORTHO05D003849 7.1e-24 115.2 128 53.1
Nn4g22578 Nelumbo nucifera HOM05D001715 ORTHO05D004824 4.6e-23 112.5 134 51.5
Peaxi162Scf00700g00435 Petunia axillaris HOM05D001715 ORTHO05D004824 3.0e-22 109.8 92 60.9
SGA_v2.0_scaffold47G17520 Striga asiatica HOM05D001715 ORTHO05D004824 1.9e-21 107.1 134 52.2
Rhsim10G0017400 Rhododendron simsii HOM05D001715 ORTHO05D004824 3.3e-21 106.3 106 56.6
SGA_v2.0_scaffold131G34393 Striga asiatica HOM05D001383 ORTHO05D000309 4.7e-20 102.4 74 90.5
arahy.Tifrunner.gnm1.ann1.3H0FM5 Arachis hypogaea HOM05D001715 ORTHO05D004824 1.8e-19 100.5 94 57.4
Aqoxy3G03035 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 2.9e-17 93.2 107 48.6
AUR62041236 Chenopodium quinoa HOM05D001715 ORTHO05D004824 4.9e-17 92.4 102 52.0
SGA_v2.0_scaffold206G41860 Striga asiatica HOM05D001383 ORTHO05D000309 6.4e-17 92.0 75 90.7
Sc03g0007260 Simmondsia chinensis HOM05D001715 ORTHO05D004824 4.6e-15 85.9 92 50.0
SGA_v2.0_scaffold121G33077 Striga asiatica HOM05D001383 ORTHO05D000309 7.8e-15 85.1 75 57.3
Aa31LG9G1060 Aethionema arabicum HOM05D004782 ORTHO05D005498 3.9e-14 82.8 112 45.5
Pp3c21_7830 Physcomitrium patens HOM05D001715 ORTHO05D004824 3.3e-13 79.7 115 37.4
Pp3c18_8800 Physcomitrium patens HOM05D001715 ORTHO05D004824 6.2e-12 75.5 120 37.5
SGA_v2.0_scaffold15G07207 Striga asiatica HOM05D001383 ORTHO05D000309 9.9e-10 68.2 66 45.5
SGA_v2.0_scaffold28G12041 Striga asiatica HOM05D001383 ORTHO05D000309 1.3e-09 67.8 49 53.1
Mapoly0074s0018 Marchantia polymorpha HOM05D001715 ORTHO05D004824 4.9e-09 65.9 105 38.1
SGA_v2.0_scaffold123G33399 Striga asiatica HOM05D001383 ORTHO05D000309 4.9e-09 65.9 49 51.0
SMO119G0416 Selaginella moellendorffii HOM05D001715 ORTHO05D004824 8.4e-09 65.1 122 36.1
SEGI_05213 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 1.1e-08 64.7 139 34.5
SGA_v2.0_scaffold283G46984 Striga asiatica HOM05D001383 ORTHO05D000309 1.4e-08 64.3 59 49.2
Cc07_g20220 Coffea canephora HOM05D001715 ORTHO05D004824 7.1e-08 62.0 74 45.9
SGA_v2.0_scaffold4G02359 Striga asiatica HOM05D001383 ORTHO05D000309 9.3e-08 61.6 86 36.0
vmacro18295 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 2.7e-07 60.1 104 38.5
SGA_v2.0_scaffold310G48213 Striga asiatica HOM05D001383 ORTHO05D000309 1.0e-06 58.2 54 48.1
CSS0016932 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 1.3e-06 57.8 42 69.0
SGA_v2.0_scaffold148G36478 Striga asiatica HOM05D001383 ORTHO05D000309 5.1e-06 55.8 40 57.5
SGA_v2.0_scaffold14G07096 Striga asiatica HOM05D001383 ORTHO05D000309 5.1e-06 55.8 50 46.0
SGA_v2.0_scaffold268G46210 Striga asiatica HOM05D001383 ORTHO05D000309 6.6e-06 55.5 49 51.0
SGA_v2.0_scaffold59G20728 Striga asiatica HOM05D001383 ORTHO05D000309 6.6e-06 55.5 55 45.5
SGA_v2.0_scaffold179G39548 Striga asiatica HOM05D001383 ORTHO05D000309 8.7e-06 55.1 53 49.1


User provided reference genes

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