Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold133G34659 Striga asiatica HOM05D000003 ORTHO05D000126 1.0e-99 366.7 178 100.0
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 2.3e-19 99.8 76 50.0
SGA_v2.0_scaffold7G03666 Striga asiatica HOM05D000198 ORTHO05D005702 2.8e-17 92.8 73 54.8
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 6.9e-16 88.2 71 52.1
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 2.0e-10 70.1 74 32.4
Dinv11369 Davidia involucrata HOM05D000003 ORTHO05D000126 9.7e-10 67.8 77 39.0
Dinv12691 Davidia involucrata HOM05D000003 ORTHO05D000126 1.3e-09 67.4 77 40.3
Dinv13290 Davidia involucrata HOM05D000003 ORTHO05D000126 1.3e-09 67.4 80 40.0
Dinv24168 Davidia involucrata HOM05D000723 ORTHO05D001760 1.3e-09 67.4 90 38.9
Dinv31372 Davidia involucrata HOM05D000003 ORTHO05D000126 1.3e-09 67.4 90 38.9
Dinv44808 Davidia involucrata HOM05D000003 ORTHO05D000126 1.7e-09 67.0 90 38.9
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 1.7e-09 67.0 44 61.4
Dinv03294 Davidia involucrata HOM05D000003 ORTHO05D000126 2.8e-09 66.2 86 37.2
Ah.11g039260 Amaranthus hybridus HOM05D000003 ORTHO05D000126 1.8e-08 63.5 59 42.4
Sc12g0003020 Simmondsia chinensis HOM05D000003 ORTHO05D000126 1.8e-08 63.5 75 30.7
Lj5g0024244 Lotus japonicus HOM05D000003 ORTHO05D000126 5.3e-08 62.0 86 30.2
Dinv12507 Davidia involucrata HOM05D022672 ORTHO05D000126 7.0e-08 61.6 71 35.2
Dinv24368 Davidia involucrata HOM05D000003 ORTHO05D000126 7.0e-08 61.6 86 32.6
LjContig00312_ERROPOS870357g0011324 Lotus japonicus HOM05D000003 ORTHO05D000126 7.0e-08 61.6 97 29.9
QL09p041419 Quercus lobata HOM05D000003 ORTHO05D000126 7.0e-08 61.6 66 37.9
Ah.00g237970 Amaranthus hybridus HOM05D000003 ORTHO05D000126 9.1e-08 61.2 59 40.7
Dinv09809 Davidia involucrata HOM05D000003 ORTHO05D000126 9.1e-08 61.2 80 37.5
Ah.04g157460 Amaranthus hybridus HOM05D000003 ORTHO05D000126 1.2e-07 60.8 69 36.2
Dinv34280 Davidia involucrata HOM05D000003 ORTHO05D000126 1.2e-07 60.8 70 38.6
Lj6g0025856 Lotus japonicus HOM05D000003 ORTHO05D000126 1.2e-07 60.8 97 28.9
Atru.chr1.3557 Acer truncatum HOM05D000003 ORTHO05D000126 1.6e-07 60.5 70 35.7
Rhsim06G0043400 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.6e-07 60.5 86 33.7
vmacro02127 Vaccinium macrocarpon HOM05D000003 ORTHO05D000004 1.6e-07 60.5 71 32.4
Dinv26582 Davidia involucrata HOM05D055339 ORTHO05D000126 2.0e-07 60.1 73 35.6
QL12p040656 Quercus lobata HOM05D000003 ORTHO05D000126 2.0e-07 60.1 96 35.4
Dinv19479 Davidia involucrata HOM05D000077 ORTHO05D000339 2.6e-07 59.7 71 33.8
Dinv32967 Davidia involucrata HOM05D000280 ORTHO05D003998 2.6e-07 59.7 71 33.8
QL02p008707 Quercus lobata HOM05D000003 ORTHO05D000126 2.6e-07 59.7 77 29.9
Ah.06g186500 Amaranthus hybridus HOM05D000003 ORTHO05D000126 3.5e-07 59.3 63 36.5
Ah.09g230460 Amaranthus hybridus HOM05D000003 ORTHO05D000126 5.9e-07 58.5 105 29.5
AUR62006131 Chenopodium quinoa HOM05D000003 ORTHO05D000126 5.9e-07 58.5 115 30.4
QL02p014714 Quercus lobata HOM05D000003 ORTHO05D000126 5.9e-07 58.5 99 32.3
Haze_09938 Corylus avellana HOM05D000003 ORTHO05D000126 7.7e-07 58.2 107 28.0
Atru.chr6.1085 Acer truncatum HOM05D000003 ORTHO05D000126 1.0e-06 57.8 70 35.7
AUR62022274 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.0e-06 57.8 67 38.8
AUR62036218 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.0e-06 57.8 67 34.3
AUR62005685 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.3e-06 57.4 67 34.3
AUR62022378 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.3e-06 57.4 67 34.3
Dinv17959 Davidia involucrata HOM05D000003 ORTHO05D000126 1.3e-06 57.4 77 32.5
QL05p063735 Quercus lobata HOM05D000003 ORTHO05D000126 1.3e-06 57.4 86 29.1
Atru.chr6.1097 Acer truncatum HOM05D000003 ORTHO05D000126 1.7e-06 57.0 70 35.7
Lj3g0007232 Lotus japonicus HOM05D000003 ORTHO05D000126 1.7e-06 57.0 83 27.7
QL06p037254 Quercus lobata HOM05D000003 ORTHO05D000126 1.7e-06 57.0 80 27.5
Dinv06062 Davidia involucrata HOM05D000003 ORTHO05D000126 2.2e-06 56.6 69 30.4
Lj4g0024219 Lotus japonicus HOM05D000003 ORTHO05D000126 2.2e-06 56.6 79 24.1
QL04p045400 Quercus lobata HOM05D000003 ORTHO05D000126 2.2e-06 56.6 80 30.0
QL12p015288 Quercus lobata HOM05D000003 ORTHO05D000126 2.2e-06 56.6 74 31.1
QL93p2011_0013 Quercus lobata HOM05D000003 ORTHO05D000126 2.2e-06 56.6 74 31.1
Aa31sc387G10 Aethionema arabicum HOM05D000496 ORTHO05D000411 2.9e-06 56.2 81 30.9
AUR62031375 Chenopodium quinoa HOM05D000003 ORTHO05D000006 2.9e-06 56.2 67 34.3
AUR62039640 Chenopodium quinoa HOM05D000003 ORTHO05D000126 2.9e-06 56.2 67 34.3
Dinv23120 Davidia involucrata HOM05D000003 ORTHO05D000126 2.9e-06 56.2 71 29.6
Lj4C700T0 Lonicera japonica HOM05D000003 ORTHO05D000126 2.9e-06 56.2 72 31.9
Rhsim04G0089300 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.9e-06 56.2 69 31.9
RhsimUnG0029000 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.9e-06 56.2 69 31.9
AUR62030222 Chenopodium quinoa HOM05D000003 ORTHO05D000126 3.8e-06 55.8 67 35.8
AUR62040080 Chenopodium quinoa HOM05D000003 ORTHO05D000126 3.8e-06 55.8 62 37.1
QL03p012601 Quercus lobata HOM05D000003 ORTHO05D000126 3.8e-06 55.8 72 36.1
QL08p033637 Quercus lobata HOM05D000003 ORTHO05D000006 3.8e-06 55.8 81 34.6
QL09p045602 Quercus lobata HOM05D000003 ORTHO05D000126 3.8e-06 55.8 69 33.3
RhsimUnG0010100 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.8e-06 55.8 68 33.8
SHI30882 Sapria himalayana HOM05D000003 ORTHO05D000126 3.8e-06 55.8 84 26.2
Dinv08166 Davidia involucrata HOM05D000003 ORTHO05D000126 5.0e-06 55.5 71 35.2
Dinv10075 Davidia involucrata HOM05D000003 ORTHO05D000126 5.0e-06 55.5 77 28.6
Rhsim06G0052000 Rhododendron simsii HOM05D000003 ORTHO05D000126 5.0e-06 55.5 69 31.9
Ah.10g024870 Amaranthus hybridus HOM05D005498 ORTHO05D006719 6.5e-06 55.1 69 31.9
QL02p016877 Quercus lobata HOM05D000003 ORTHO05D000126 6.5e-06 55.1 72 30.6
QL04p092364 Quercus lobata HOM05D000003 ORTHO05D000126 6.5e-06 55.1 81 34.6
CSS0003648 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 8.5e-06 54.7 62 38.7
Dinv10341 Davidia involucrata HOM05D001724 ORTHO05D007284 8.5e-06 54.7 69 29.0
Dinv15867 Davidia involucrata HOM05D000003 ORTHO05D000126 8.5e-06 54.7 69 29.0
SGA_v2.0_scaffold88G27261 Striga asiatica HOM05D000198 ORTHO05D000126 8.5e-06 54.7 40 57.5


User provided reference genes

Program Settings