Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold131G34424 Striga asiatica HOM05D001715 ORTHO05D004824 9.9e-92 340.1 174 100.0
SGA_v2.0_scaffold47G17520 Striga asiatica HOM05D001715 ORTHO05D004824 9.4e-50 200.7 159 72.3
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 3.0e-40 169.1 262 45.0
MSTRG.24047 Avicennia marina HOM05D001715 ORTHO05D004824 7.5e-39 164.5 270 44.1
Dinv33423 Davidia involucrata HOM05D001715 ORTHO05D004824 6.3e-38 161.4 270 41.9
FAN26G1929 Fragaria x ananassa HOM05D001715 ORTHO05D004824 1.4e-37 160.2 154 56.5
Cc07_g00030 Coffea canephora HOM05D001715 ORTHO05D004824 4.5e-36 155.2 270 41.5
Lsat_1_v5_gn_4_184360 Lactuca sativa HOM05D001715 ORTHO05D004824 7.7e-36 154.5 270 41.5
Glyma.19G055900 Glycine max HOM05D001715 ORTHO05D004824 1.0e-35 154.1 273 38.8
HanXRQChr15g0486831 Helianthus annuus HOM05D001715 ORTHO05D004824 1.0e-35 154.1 255 42.0
Hma1.2p1_1747F.1_g300590 Hydrangea macrophylla HOM05D001715 ORTHO05D004824 1.0e-35 154.1 270 40.7
Actinidia05979 Actinidia chinensis HOM05D001715 ORTHO05D004824 2.2e-35 152.9 271 40.2
AL5G16870 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 2.2e-35 152.9 273 37.7
CSS0010910 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 2.9e-35 152.5 271 40.6
Ciclev10016259m.g Citrus clementina HOM05D001715 ORTHO05D004824 5.0e-35 151.8 270 39.3
Phvul.001G096400 Phaseolus vulgaris HOM05D001715 ORTHO05D004824 6.5e-35 151.4 273 37.4
MSTRG.3136 Avicennia marina HOM05D001715 ORTHO05D004824 1.1e-34 150.6 270 41.5
Actinidia36126 Actinidia chinensis HOM05D001715 ORTHO05D004824 1.9e-34 149.8 179 48.6
Lj1g0020864 Lotus japonicus HOM05D001715 ORTHO05D004824 2.5e-34 149.4 271 37.6
Duzib147G1449 Durio zibethinus HOM05D001715 ORTHO05D004824 3.2e-34 149.1 272 40.1
Carub.0005s0587 Capsella rubella HOM05D001715 ORTHO05D004824 5.5e-34 148.3 273 39.6
Thecc.04G019800 Theobroma cacao HOM05D001715 ORTHO05D004824 5.5e-34 148.3 271 39.9
Aa31LG2G5160 Aethionema arabicum HOM05D001715 ORTHO05D004824 7.2e-34 147.9 271 39.1
Lju41A43T27 Lonicera japonica HOM05D001715 ORTHO05D004824 7.2e-34 147.9 282 38.3
BcaC06g30988 Brassica carinata HOM05D001715 ORTHO05D004824 1.2e-33 147.1 273 35.9
BolC7t44170H Brassica oleracea HOM05D001715 ORTHO05D004824 1.2e-33 147.1 273 35.9
COL.COLO4_29175 Corchorus olitorius HOM05D001715 ORTHO05D004824 1.2e-33 147.1 271 38.0
THA.LOC104825315 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 1.2e-33 147.1 273 39.2
A06p41160 Brassica napus HOM05D001715 ORTHO05D003849 1.6e-33 146.7 272 35.7
C07p36500 Brassica napus HOM05D001715 ORTHO05D003849 1.6e-33 146.7 272 35.7
Migut.H00070 Erythranthe guttata HOM05D001715 ORTHO05D004824 1.6e-33 146.7 272 41.2
CARHR148830 Cardamine hirsuta HOM05D001715 ORTHO05D004824 2.1e-33 146.4 272 39.0
HanXRQChr09g0255491 Helianthus annuus HOM05D001715 ORTHO05D004824 2.1e-33 146.4 271 40.6
MD09G1022400 Malus domestica HOM05D001715 ORTHO05D004824 2.1e-33 146.4 268 39.6
THA.LOC104805361 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 2.1e-33 146.4 273 38.8
BcaC06g33817 Brassica carinata HOM05D001715 ORTHO05D004824 2.7e-33 146.0 271 37.6
Ca_10003_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 2.7e-33 146.0 272 39.3
Thhalv10004728m.g Eutrema salsugineum HOM05D001715 ORTHO05D004824 2.7e-33 146.0 286 35.0
Gohir.A07G224000 Gossypium hirsutum HOM05D001715 ORTHO05D004824 3.6e-33 145.6 271 38.0
Gohir.D07G231300 Gossypium hirsutum HOM05D001715 ORTHO05D004824 3.6e-33 145.6 271 38.0
Gorai.001G266400 Gossypium raimondii HOM05D001715 ORTHO05D004824 3.6e-33 145.6 271 38.0
Atru.chr6.2434 Acer truncatum HOM05D001715 ORTHO05D004824 4.7e-33 145.2 266 38.0
AT5G40550 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 4.7e-33 145.2 273 37.7
Glyma.16G069000 Glycine max HOM05D001715 ORTHO05D004824 4.7e-33 145.2 271 38.7
MD17G1021800 Malus domestica HOM05D001715 ORTHO05D004824 4.7e-33 145.2 271 38.7
Sp2g16670 Schrenkiella parvula HOM05D001715 ORTHO05D004824 4.7e-33 145.2 270 36.7
Potri.001G342700 Populus trichocarpa HOM05D001715 ORTHO05D004824 6.1e-33 144.8 271 38.0
Prupe.3G294200 Prunus persica HOM05D001715 ORTHO05D004824 6.1e-33 144.8 273 39.2
TAR374G1502 Trochodendron aralioides HOM05D001715 ORTHO05D004824 6.1e-33 144.8 272 39.7
Carub.0007s3497 Capsella rubella HOM05D001715 ORTHO05D004824 8.0e-33 144.4 274 37.6
Aqoxy5G03737 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 1.0e-32 144.1 274 39.4
TPR.G1113 Trifolium pratense HOM05D001715 ORTHO05D004824 1.0e-32 144.1 270 38.9
Gohir.D11G070100 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.4e-32 143.7 271 38.7
Gorai.007G075200 Gossypium raimondii HOM05D001715 ORTHO05D004824 1.4e-32 143.7 271 38.7
CSS0002803 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 2.3e-32 142.9 175 48.6
DCAR_015064 Daucus carota HOM05D001715 ORTHO05D004824 2.3e-32 142.9 269 37.5
RcHm_v2.0_Chr2g0123161 Rosa chinensis HOM05D001715 ORTHO05D004824 2.3e-32 142.9 270 39.3
AL7G49260 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 3.0e-32 142.5 274 37.2
FAN28G2154 Fragaria x ananassa HOM05D001715 ORTHO05D004824 3.0e-32 142.5 271 38.0
Psat3g166200 Pisum sativum HOM05D001715 ORTHO05D004824 3.0e-32 142.5 273 39.2
Rhsim10G0017400 Rhododendron simsii HOM05D001715 ORTHO05D004824 3.0e-32 142.5 144 59.0
CARHR261430 Cardamine hirsuta HOM05D001715 ORTHO05D004824 4.0e-32 142.1 272 36.8
PGR142G0496 Punica granatum HOM05D001715 ORTHO05D004824 4.0e-32 142.1 265 38.9
Medtr7g033200 Medicago truncatula HOM05D001715 ORTHO05D004824 5.2e-32 141.7 270 38.1
CANSAT64G1664 Cannabis sativa HOM05D001715 ORTHO05D004824 6.8e-32 141.4 272 39.3
VMungo1383G3508 Vigna mungo HOM05D001715 ORTHO05D004824 6.8e-32 141.4 272 37.9
Gohir.D04G058700 Gossypium hirsutum HOM05D001715 ORTHO05D004824 8.8e-32 141.0 271 38.0
Gorai.012G065400 Gossypium raimondii HOM05D001715 ORTHO05D004824 1.2e-31 140.6 273 37.4
CiPaw.03G045800 Carya illinoinensis HOM05D001715 ORTHO05D004824 1.5e-31 140.2 271 37.6
Manes.17G110800 Manihot esculenta HOM05D001715 ORTHO05D004824 1.5e-31 140.2 271 37.3
PGR083G0973 Punica granatum HOM05D001715 ORTHO05D004824 1.5e-31 140.2 271 37.3
Lalb_Chr22g0360701 Lupinus albus HOM05D001715 ORTHO05D004824 2.0e-31 139.8 270 36.7
GSVIVG01032368001 Vitis vinifera HOM05D001715 ORTHO05D004824 2.0e-31 139.8 179 45.8
Gohir.A05G354400 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.6e-31 139.4 273 37.0
BcaC03g17465 Brassica carinata HOM05D001715 ORTHO05D003849 4.4e-31 138.7 250 39.2
Lalb_Chr24g0403561 Lupinus albus HOM05D001715 ORTHO05D004824 4.4e-31 138.7 270 37.4
FAN19G0324 Fragaria x ananassa HOM05D001715 ORTHO05D004824 5.7e-31 138.3 265 36.6
MD17G1021900 Malus domestica HOM05D001715 ORTHO05D004824 9.8e-31 137.5 269 38.3
TWI12G0217 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 9.8e-31 137.5 273 37.7
FAN23G2554 Fragaria x ananassa HOM05D001715 ORTHO05D004824 1.3e-30 137.1 281 36.7
Sabra16G0222300 Salix brachista HOM05D001715 ORTHO05D004824 1.7e-30 136.7 183 43.2
unitig_748.g6979 Utricularia gibba HOM05D001715 ORTHO05D004824 1.7e-30 136.7 255 41.6
C02p54210 Brassica napus HOM05D001715 ORTHO05D003849 2.2e-30 136.3 272 36.4
FvH4_1g25240 Fragaria vesca HOM05D001715 ORTHO05D004824 2.2e-30 136.3 273 35.9
PGSC0003DMG400012610 Solanum tuberosum HOM05D001715 ORTHO05D004824 2.2e-30 136.3 270 37.8
Cfa007336 Carpinus fangiana HOM05D001715 ORTHO05D004824 3.7e-30 135.6 274 36.1
Rhsim10G0014300 Rhododendron simsii HOM05D001715 ORTHO05D004824 3.7e-30 135.6 275 38.2
CDE04G1703 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 4.8e-30 135.2 172 49.4
Solyc02g093490.3 Solanum lycopersicum HOM05D001715 ORTHO05D004824 4.8e-30 135.2 270 37.4
arahy.Tifrunner.gnm1.ann1.Q5RJ9B Arachis hypogaea HOM05D001715 ORTHO05D004824 6.3e-30 134.8 272 39.7
CDE07G0729 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 1.1e-29 134.0 172 48.8
Hund15533 Selenicereus undatus HOM05D001715 ORTHO05D004824 1.1e-29 134.0 273 38.5
PSO063G0233 Papaver somniferum HOM05D001715 ORTHO05D004824 1.4e-29 133.7 267 37.8
PSO754G0079 Papaver somniferum HOM05D001715 ORTHO05D004824 1.4e-29 133.7 267 37.8
TWI12G0250 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 1.4e-29 133.7 273 36.6
TWI12G0380 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 1.4e-29 133.7 273 36.6
Haze_14762 Corylus avellana HOM05D001715 ORTHO05D004824 1.8e-29 133.3 221 37.1
Oeu035801.2 Olea europaea HOM05D001715 ORTHO05D004824 2.4e-29 132.9 177 44.6
THA.LOC104823958 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 2.4e-29 132.9 272 34.9
vmacro07988 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 2.4e-29 132.9 178 46.1
Ah.02g128230 Amaranthus hybridus HOM05D001715 ORTHO05D004824 3.1e-29 132.5 269 36.4
TWI12G0372 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 3.1e-29 132.5 179 43.0
arahy.Tifrunner.gnm1.ann1.VP8W98 Arachis hypogaea HOM05D001715 ORTHO05D004824 4.1e-29 132.1 270 38.5
Duzib187G0149 Durio zibethinus HOM05D001715 ORTHO05D004824 4.1e-29 132.1 184 42.9
Duzib187G0323 Durio zibethinus HOM05D001715 ORTHO05D004824 4.1e-29 132.1 210 39.5
Eucgr.J02260 Eucalyptus grandis HOM05D001715 ORTHO05D004824 5.4e-29 131.7 265 36.2
Sopen02g038180 Solanum pennellii HOM05D001715 ORTHO05D004824 5.4e-29 131.7 269 37.9
SGA_v2.0_scaffold18G08270 Striga asiatica HOM05D001715 ORTHO05D004824 5.4e-29 131.7 259 39.4
Peaxi162Scf00420g00131 Petunia axillaris HOM05D001715 ORTHO05D004824 7.0e-29 131.3 297 34.3
TAR622G0120 Trochodendron aralioides HOM05D001715 ORTHO05D004824 7.0e-29 131.3 273 36.3
A02p35490 Brassica napus HOM05D001715 ORTHO05D003849 2.7e-28 129.4 272 34.9
Dinv25723 Davidia involucrata HOM05D001715 ORTHO05D004510 7.7e-28 127.9 257 38.9
Sc03g0007260 Simmondsia chinensis HOM05D001715 ORTHO05D004824 7.7e-28 127.9 180 43.9
Lj7A601T103 Lonicera japonica HOM05D001715 ORTHO05D004824 2.9e-27 125.9 291 31.6
HPP92_019596 Vanilla planifolia HOM05D001715 ORTHO05D004824 5.0e-27 125.2 181 44.2
AT3G27460 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 8.6e-27 124.4 180 45.0
ClCG10G013770 Citrullus lanatus HOM05D001715 ORTHO05D004824 8.6e-27 124.4 269 38.3
CsaV3_3G042890 Cucumis sativus L. HOM05D001715 ORTHO05D004824 1.5e-26 123.6 269 37.5
MELO3C026589.2 Cucumis melo HOM05D001715 ORTHO05D004824 1.9e-26 123.2 266 38.3
Ca_12396_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 2.5e-26 122.9 214 36.9
SHI03767 Sapria himalayana HOM05D001715 ORTHO05D004824 3.3e-26 122.5 170 42.4
Zm00001eb409000 Zea mays HOM05D001715 ORTHO05D004824 3.3e-26 122.5 209 42.1
QL05p032480 Quercus lobata HOM05D001715 ORTHO05D004824 5.5e-26 121.7 306 33.0
QL05p033603 Quercus lobata HOM05D001715 ORTHO05D004824 5.5e-26 121.7 306 33.0
ATR0824G003 Amborella trichopoda HOM05D001715 ORTHO05D004824 7.2e-26 121.3 277 35.0
BraA06t27038Z Brassica rapa HOM05D001715 ORTHO05D004824 2.8e-25 119.4 182 39.6
BolC2t11484H Brassica oleracea HOM05D001715 ORTHO05D004824 4.7e-25 118.6 273 34.4
Duzib264G0165 Durio zibethinus HOM05D001715 ORTHO05D004824 4.0e-24 115.5 178 43.8
Cpa.g.sc108.80 Carica papaya HOM05D001715 ORTHO05D004824 6.8e-24 114.8 204 38.7
Gohir.A11G065900 Gossypium hirsutum HOM05D001715 ORTHO05D004824 6.8e-24 114.8 204 40.7
CAN.G473.27 Capsicum annuum HOM05D001715 ORTHO05D004824 8.9e-24 114.4 119 52.9
Gorai.001G266500 Gossypium raimondii HOM05D001715 ORTHO05D004824 1.5e-23 113.6 171 41.5
Manes.15G152100 Manihot esculenta HOM05D001715 ORTHO05D004824 1.5e-23 113.6 180 41.7
Medtr7g033170 Medicago truncatula HOM05D001715 ORTHO05D004824 1.5e-23 113.6 172 42.4
Os12g0290600 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D004824 5.7e-23 111.7 180 42.8
BraA02t08550Z Brassica rapa HOM05D001715 ORTHO05D003849 7.5e-23 111.3 316 31.0
QL02p073949 Quercus lobata HOM05D001715 ORTHO05D004824 2.8e-22 109.4 87 62.1
BcaB07g30155 Brassica carinata HOM05D001715 ORTHO05D004824 1.8e-21 106.7 214 37.4
Nitab4.5_0006683g0120 Nicotiana tabacum HOM05D001715 ORTHO05D004824 7.0e-21 104.8 234 38.5
arahy.Tifrunner.gnm1.ann1.3H0FM5 Arachis hypogaea HOM05D001715 ORTHO05D004824 2.0e-20 103.2 224 33.5
ECA232G3480 Erigeron canadensis HOM05D001715 ORTHO05D004824 3.5e-20 102.4 70 70.0
MBI11_g21317_MAGBIO Magnolia biondii HOM05D001715 ORTHO05D004824 3.5e-20 102.4 88 60.2
Oeu021199.1 Olea europaea HOM05D001715 ORTHO05D004824 4.5e-20 102.1 86 61.6
Nn4g22578 Nelumbo nucifera HOM05D001715 ORTHO05D004824 7.8e-20 101.3 134 47.8
SEGI_05213 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 3.8e-19 99.0 189 37.0
BolC2t11492H Brassica oleracea HOM05D001715 ORTHO05D004824 5.0e-19 98.6 160 40.6
Peaxi162Scf00700g00435 Petunia axillaris HOM05D001715 ORTHO05D004824 2.5e-18 96.3 158 42.4
Sed0015141 Sechium edule HOM05D001715 ORTHO05D004824 3.3e-18 95.9 202 37.6
SMO119G0416 Selaginella moellendorffii HOM05D001715 ORTHO05D004824 7.3e-18 94.7 181 34.3
PSO478G2184 Papaver somniferum HOM05D001715 ORTHO05D004824 2.8e-17 92.8 148 38.5
EL10As9g23941 Beta vulgaris HOM05D001715 ORTHO05D004824 3.6e-17 92.4 168 36.3
AUR62041236 Chenopodium quinoa HOM05D001715 ORTHO05D004824 2.3e-16 89.7 95 47.4
Pp3c21_7830 Physcomitrium patens HOM05D001715 ORTHO05D004824 2.3e-16 89.7 257 30.4
Rhsim08G0048300 Rhododendron simsii HOM05D001715 ORTHO05D004824 3.0e-16 89.4 88 51.1
SEGI_27231 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 3.0e-16 89.4 86 54.7
Oeu043035.1 Olea europaea HOM05D001715 ORTHO05D004824 4.0e-16 89.0 75 60.0
AUR62033204 Chenopodium quinoa HOM05D001715 ORTHO05D004824 5.2e-16 88.6 215 31.2
Nitab4.5_0001562g0140 Nicotiana tabacum HOM05D001715 ORTHO05D004824 6.8e-16 88.2 163 39.9
C02p54270 Brassica napus HOM05D001715 ORTHO05D004824 8.9e-16 87.8 151 39.7
CBR_g1018 Chara braunii HOM05D001161 ORTHO05D000497 5.8e-15 85.1 139 38.1
Mapoly0074s0018 Marchantia polymorpha HOM05D001715 ORTHO05D004824 1.3e-14 84.0 185 36.2
vmacro18295 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 2.2e-14 83.2 88 50.0
AagrBONN_evm.TU.Sc2ySwM_344.5345 Anthoceros agrestis HOM05D001715 ORTHO05D004824 2.9e-14 82.8 95 47.4
CSS0027227 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 6.4e-14 81.6 81 58.0
Pp3c18_8800 Physcomitrium patens HOM05D001715 ORTHO05D004824 6.4e-14 81.6 257 29.2
Gohir.D07G231366 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.5e-10 70.5 121 38.8
Cc07_g20220 Coffea canephora HOM05D001715 ORTHO05D004824 2.5e-10 69.7 194 32.5
HPP92_019650 Vanilla planifolia HOM05D001715 ORTHO05D004824 2.8e-09 66.2 79 51.9
vmacro18296 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 3.4e-07 59.3 163 32.5
Oeu033726.1 Olea europaea HOM05D001715 ORTHO05D004824 7.5e-07 58.2 34 85.3
vmacro18298 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 2.9e-06 56.2 75 40.0


User provided reference genes

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