Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold127G33986 Striga asiatica HOM05D009140 ORTHO05D000004 7.9e-120 433.7 208 100.0
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 4.9e-21 105.5 154 39.0
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 4.9e-21 105.5 177 36.2
SGA_v2.0_scaffold127G33968 Striga asiatica HOM05D009140 ORTHO05D000004 1.2e-19 100.9 146 38.4
SGA_v2.0_scaffold134G34731 Striga asiatica HOM05D009140 ORTHO05D000004 1.0e-18 97.8 153 35.3
SGA_v2.0_scaffold53G19333 Striga asiatica HOM05D009140 ORTHO05D010636 1.0e-18 97.8 153 35.9
SGA_v2.0_scaffold12G06017 Striga asiatica HOM05D009140 ORTHO05D010636 3.0e-18 96.3 149 34.2
SGA_v2.0_scaffold67G22642 Striga asiatica HOM05D000407 ORTHO05D000004 3.1e-15 86.3 137 34.3
SGA_v2.0_scaffold93G28364 Striga asiatica HOM05D009140 ORTHO05D010636 7.6e-14 81.6 119 37.0
SGA_v2.0_scaffold132G34546 Striga asiatica HOM05D010565 ORTHO05D011213 1.9e-12 77.0 81 43.2
SGA_v2.0_scaffold54G19606 Striga asiatica HOM05D009140 ORTHO05D010215 3.2e-12 76.3 134 32.8
SGA_v2.0_scaffold43G16501 Striga asiatica HOM05D000007 ORTHO05D021020 7.1e-12 75.1 158 31.6
SGA_v2.0_scaffold11G05791 Striga asiatica HOM05D000563 ORTHO05D000536 1.2e-11 74.3 158 30.4
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 1.6e-11 73.9 157 29.3
SGA_v2.0_scaffold380G50369 Striga asiatica HOM05D010565 ORTHO05D011213 1.6e-11 73.9 158 27.2
SGA_v2.0_scaffold6G03466 Striga asiatica HOM05D000003 ORTHO05D000004 3.5e-11 72.8 154 32.5
SGA_v2.0_scaffold76G25079 Striga asiatica HOM05D009140 ORTHO05D000004 6.0e-11 72.0 166 31.3
SGA_v2.0_scaffold61G21170 Striga asiatica HOM05D009140 ORTHO05D010215 2.3e-10 70.1 107 37.4
BcaB01g02064 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-10 69.7 154 30.5
BolC8t47524H Brassica oleracea HOM05D000003 ORTHO05D000004 3.0e-10 69.7 153 26.1
Aa31LG5G23430 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.7e-10 68.6 156 28.2
BcaC09g49394 Brassica carinata HOM05D000003 ORTHO05D000411 6.7e-10 68.6 170 27.6
BcaNung00070 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-09 67.4 150 26.0
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 1.5e-09 67.4 158 29.7
CiPaw.16G041700 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.9e-09 67.0 173 26.6
Sp6g08450 Schrenkiella parvula HOM05D000003 ORTHO05D024751 2.5e-09 66.6 154 29.9
SGA_v2.0_scaffold26G11238 Striga asiatica HOM05D008147 ORTHO05D010215 2.5e-09 66.6 122 34.4
CANSAT01G1147 Cannabis sativa HOM05D000003 ORTHO05D000004 3.3e-09 66.2 206 26.2
BolC5t31424H Brassica oleracea HOM05D001350 ORTHO05D001091 5.6e-09 65.5 153 28.1
SGA_v2.0_scaffold38G15008 Striga asiatica HOM05D000429 ORTHO05D021023 5.6e-09 65.5 209 27.8
Aa31sc74G100 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.4e-09 65.1 249 24.1
EL10Ac1g02001 Beta vulgaris HOM05D018654 ORTHO05D018414 7.4e-09 65.1 149 26.8
COL.COLO4_28522 Corchorus olitorius HOM05D000003 ORTHO05D000126 9.6e-09 64.7 156 25.6
SGA_v2.0_scaffold279G46783 Striga asiatica HOM05D005209 ORTHO05D006188 9.6e-09 64.7 165 25.5
SGA_v2.0_scaffold120G33020 Striga asiatica HOM05D000003 ORTHO05D000004 1.3e-08 64.3 90 36.7
Aa31LG11G5340 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.6e-08 63.9 152 27.6
CANSAT80G0199 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-08 63.5 187 26.2
Aa31sc142G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.8e-08 63.2 149 28.2
EL10Ac7g17531 Beta vulgaris HOM05D000003 ORTHO05D000004 2.8e-08 63.2 147 27.2
QL01p005053 Quercus lobata HOM05D000003 ORTHO05D000004 2.8e-08 63.2 151 27.2
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 2.8e-08 63.2 156 27.6
BcaC05g28073 Brassica carinata HOM05D000003 ORTHO05D000411 3.7e-08 62.8 161 24.8
SGA_v2.0_scaffold122G33296 Striga asiatica HOM05D000003 ORTHO05D000004 3.7e-08 62.8 161 27.3
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 3.7e-08 62.8 157 26.1
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 3.7e-08 62.8 113 32.7
Sp1g34520 Schrenkiella parvula HOM05D000003 ORTHO05D000004 4.8e-08 62.4 139 28.1
SGA_v2.0_scaffold104G30166 Striga asiatica HOM05D000003 ORTHO05D000004 4.8e-08 62.4 147 27.9
Aa31LG1G9570 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.1e-08 61.6 147 27.9
Aa31sc256G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.1e-08 61.6 155 30.3
BcaB04g17886 Brassica carinata HOM05D000003 ORTHO05D000004 1.1e-07 61.2 150 27.3
SGA_v2.0_scaffold16G07893 Striga asiatica HOM05D016777 ORTHO05D026198 1.1e-07 61.2 146 28.1
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 1.1e-07 61.2 124 31.5
Aa31LG8G16480 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.4e-07 60.8 150 26.7
BcaC09g51489 Brassica carinata HOM05D000003 ORTHO05D000411 1.4e-07 60.8 144 28.5
CiPaw.14G093100 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.4e-07 60.8 173 24.9
SGA_v2.0_scaffold403G51004 Striga asiatica HOM05D011754 ORTHO05D014689 1.4e-07 60.8 151 27.2
SGA_v2.0_scaffold65G22183 Striga asiatica HOM05D009140 ORTHO05D010215 1.4e-07 60.8 54 51.9
EL10Ac4g08380 Beta vulgaris HOM05D000003 ORTHO05D000004 1.8e-07 60.5 133 27.8
QL09p015564 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-07 60.5 151 25.8
BcaB05g25247 Brassica carinata HOM05D000003 ORTHO05D000411 2.4e-07 60.1 156 26.3
CiPaw.08G120100 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.4e-07 60.1 173 24.3
Aa31LG9G6950 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.1e-07 59.7 152 28.3
BcaB02g10370 Brassica carinata HOM05D000003 ORTHO05D000411 3.1e-07 59.7 155 26.5
Cc04_g14660 Coffea canephora HOM05D000003 ORTHO05D000167 3.1e-07 59.7 65 41.5
SGA_v2.0_scaffold5G02882 Striga asiatica HOM05D001043 ORTHO05D001555 3.1e-07 59.7 151 31.8
Aa31sc51G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.0e-07 59.3 107 31.8
Aqoxy2G01928 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.0e-07 59.3 214 23.8
EL10Ac1g01349 Beta vulgaris HOM05D003468 ORTHO05D002806 4.0e-07 59.3 118 29.7
BolC7t41032H Brassica oleracea HOM05D000003 ORTHO05D000004 4.0e-07 59.3 178 23.0
Aa31LG10G2340 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.3e-07 58.9 170 28.8
Aa31LG3G5890 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.3e-07 58.9 65 40.0
EL10Ac1g01308 Beta vulgaris HOM05D000003 ORTHO05D000167 5.3e-07 58.9 138 26.8
CANSAT21G1403 Cannabis sativa HOM05D000003 ORTHO05D000004 5.3e-07 58.9 268 22.8
Aa31LG9G9420 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.9e-07 58.5 65 36.9
Aa31sc210G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.9e-07 58.5 84 38.1
EL10Ac1g01950 Beta vulgaris HOM05D000003 ORTHO05D000004 6.9e-07 58.5 151 27.8
BcaB05g24728 Brassica carinata HOM05D000003 ORTHO05D001498 6.9e-07 58.5 153 25.5
BcaB07g33522 Brassica carinata HOM05D000003 ORTHO05D001498 6.9e-07 58.5 152 26.3
BcaC06g36253 Brassica carinata HOM05D000496 ORTHO05D000411 6.9e-07 58.5 139 25.9
SGA_v2.0_scaffold16G07830 Striga asiatica HOM05D035830 ORTHO05D010215 6.9e-07 58.5 64 40.6
CANSAT35G1149 Cannabis sativa HOM05D000003 ORTHO05D000004 9.0e-07 58.2 145 25.5
BcaB02g11015 Brassica carinata HOM05D000003 ORTHO05D000004 1.2e-06 57.8 129 30.2
COL.COLO4_05866 Corchorus olitorius HOM05D012148 ORTHO05D000004 1.2e-06 57.8 149 25.5
PSO017G3512 Papaver somniferum HOM05D000003 ORTHO05D000004 1.2e-06 57.8 151 27.2
PSO063G5400 Papaver somniferum HOM05D000003 ORTHO05D000004 1.2e-06 57.8 140 27.9
SGA_v2.0_scaffold139G35388 Striga asiatica HOM05D028223 ORTHO05D051408 1.2e-06 57.8 51 49.0
Aa31LG7G12940 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.5e-06 57.4 152 27.0
BcaC09g51180 Brassica carinata HOM05D000003 ORTHO05D001091 1.5e-06 57.4 194 24.2
Cc08_g06220 Coffea canephora HOM05D000003 ORTHO05D000004 1.5e-06 57.4 89 31.5
Sp6g38460 Schrenkiella parvula HOM05D000003 ORTHO05D009772 1.5e-06 57.4 65 41.5
Aa31sc85G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.0e-06 57.0 186 24.7
EL10Ac5g11069 Beta vulgaris HOM05D000003 ORTHO05D000004 2.0e-06 57.0 142 28.2
COL.COLO4_20039 Corchorus olitorius HOM05D000003 ORTHO05D000004 2.0e-06 57.0 68 33.8
QL12p025805 Quercus lobata HOM05D000967 ORTHO05D000796 2.0e-06 57.0 151 25.2
TWI81G0116 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.0e-06 57.0 217 24.4
Aa31LG6G10540 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.6e-06 56.6 65 36.9
QL04p088840 Quercus lobata HOM05D000003 ORTHO05D000004 2.6e-06 56.6 161 25.5
SGA_v2.0_scaffold83G26428 Striga asiatica HOM05D000003 ORTHO05D051420 2.6e-06 56.6 67 38.8
PSO832G3491 Papaver somniferum HOM05D000003 ORTHO05D000004 3.4e-06 56.2 151 25.8
Aa31LG11G6710 Aethionema arabicum HOM05D000003 ORTHO05D009772 4.5e-06 55.8 115 30.4
Aa31LG8G12860 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.5e-06 55.8 153 24.8
QL05p014002 Quercus lobata HOM05D000003 ORTHO05D000004 4.5e-06 55.8 153 24.8
Aa31LG7G12380 Aethionema arabicum HOM05D000003 ORTHO05D009772 5.8e-06 55.5 65 40.0
EL10Ac2g04418 Beta vulgaris HOM05D000003 ORTHO05D000004 5.8e-06 55.5 66 33.3
PSO170G2698 Papaver somniferum HOM05D000003 ORTHO05D001026 5.8e-06 55.5 147 28.6
QL11p053175 Quercus lobata HOM05D000003 ORTHO05D000004 5.8e-06 55.5 151 25.8
Aa31LG7G2740 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.6e-06 55.1 150 26.7
Aqoxy2G01350 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.6e-06 55.1 152 27.6
BcaC05g28305 Brassica carinata HOM05D000003 ORTHO05D001091 7.6e-06 55.1 69 37.7
QL04p067637 Quercus lobata HOM05D000003 ORTHO05D000004 7.6e-06 55.1 152 26.3
QL09p031838 Quercus lobata HOM05D000003 ORTHO05D000004 7.6e-06 55.1 165 26.1
Aa31LG3G4270 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.9e-06 54.7 155 28.4
Aa31sc18G100 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.9e-06 54.7 65 35.4


User provided reference genes

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