Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold124G33625 Striga asiatica HOM05D003406 ORTHO05D004026 1.5e-256 889.4 599 100.0
Dinv09276 Davidia involucrata HOM05D003406 ORTHO05D004026 7.0e-161 571.6 543 64.8
FAN06G4607 Fragaria x ananassa HOM05D003406 ORTHO05D004026 1.5e-158 563.9 537 73.7
arahy.Tifrunner.gnm1.ann1.07MYST Arachis hypogaea HOM05D003406 ORTHO05D004026 3.4e-155 552.7 485 82.5
Peaxi162Scf00341g00714 Petunia axillaris HOM05D003406 ORTHO05D004026 5.9e-152 542.0 541 69.5
SalBow5G0382 Salvia bowleyana HOM05D003406 ORTHO05D004026 1.5e-150 537.3 607 75.6
SalBow5G3900 Salvia bowleyana HOM05D003406 ORTHO05D004026 3.2e-150 536.2 608 75.8
MD02G1288700 Malus domestica HOM05D003406 ORTHO05D004026 7.2e-150 535.0 552 70.5
MSTRG.16987 Avicennia marina HOM05D003406 ORTHO05D004026 1.6e-149 533.9 604 74.8
Migut.B01223 Erythranthe guttata HOM05D003406 ORTHO05D004026 3.5e-144 516.2 619 72.1
Actinidia06245 Actinidia chinensis HOM05D003406 ORTHO05D004026 2.3e-143 513.5 613 70.3
Nitab4.5_0001669g0120 Nicotiana tabacum HOM05D003406 ORTHO05D004026 1.5e-139 500.7 579 68.7
vmacro13749 Vaccinium macrocarpon HOM05D003406 ORTHO05D004026 1.7e-138 497.3 637 57.9
Nitab4.5_0000151g0240 Nicotiana tabacum HOM05D003406 ORTHO05D004026 2.4e-137 493.4 550 70.2
Dinv32032 Davidia involucrata HOM05D003406 ORTHO05D004026 2.7e-136 490.0 534 74.3
GSVIVG01013527001 Vitis vinifera HOM05D003406 ORTHO05D004026 3.9e-135 486.1 527 73.4
Actinidia10165 Actinidia chinensis HOM05D003406 ORTHO05D004026 6.6e-135 485.3 514 53.7
Rhsim07G0066700 Rhododendron simsii HOM05D003406 ORTHO05D004026 4.3e-134 482.6 660 51.4
Duzib114G0281 Durio zibethinus HOM05D003406 ORTHO05D004026 1.6e-133 480.7 601 60.7
Ciclev10004445m.g Citrus clementina HOM05D003406 ORTHO05D004026 3.1e-132 476.5 522 73.8
CiPaw.13G012800 Carya illinoinensis HOM05D003406 ORTHO05D004026 8.9e-132 474.9 527 72.9
Prupe.2G034300 Prunus persica HOM05D003406 ORTHO05D004026 1.2e-131 474.6 578 67.8
CANSAT25G0328 Cannabis sativa HOM05D003406 ORTHO05D004026 4.4e-131 472.6 571 68.3
ClCG01G007460 Citrullus lanatus HOM05D003406 ORTHO05D004026 5.8e-131 472.2 684 60.1
Sabra01G0019600 Salix brachista HOM05D003406 ORTHO05D004026 5.8e-131 472.2 604 52.6
TAR369G0157 Trochodendron aralioides HOM05D003406 ORTHO05D004026 7.5e-131 471.9 525 73.0
Cc00_g06910 Coffea canephora HOM05D003406 ORTHO05D004026 1.3e-130 471.1 534 73.2
CiPaw.14G007200 Carya illinoinensis HOM05D003406 ORTHO05D004026 3.2e-129 466.5 522 72.2
QL04p014603 Quercus lobata HOM05D003406 ORTHO05D004026 9.2e-129 464.9 522 72.4
QL04p014965 Quercus lobata HOM05D003406 ORTHO05D004026 9.2e-129 464.9 522 72.4
Hund13347 Selenicereus undatus HOM05D003406 ORTHO05D004026 9.2e-129 464.9 503 73.4
TWI63G0701 Tripterygium wilfordii HOM05D003406 ORTHO05D004026 7.8e-128 461.8 581 67.6
Potri.001G026800 Populus trichocarpa HOM05D003406 ORTHO05D004026 5.0e-127 459.1 523 71.3
Eucgr.G03238 Eucalyptus grandis HOM05D003406 ORTHO05D004026 1.1e-126 458.0 483 75.8
MD07G1038200 Malus domestica HOM05D003406 ORTHO05D004026 5.6e-126 455.7 543 69.8
Nn7g36639 Nelumbo nucifera HOM05D003406 ORTHO05D004026 1.6e-125 454.1 580 66.4
Cfa010885 Carpinus fangiana HOM05D003406 ORTHO05D004026 2.8e-125 453.4 514 72.8
Thecc.10G162300 Theobroma cacao HOM05D003406 ORTHO05D004026 4.7e-125 452.6 484 75.0
BolC3t13203H Brassica oleracea HOM05D003406 ORTHO05D004026 8.1e-125 451.8 539 65.9
PGR031G1802 Punica granatum HOM05D003406 ORTHO05D004026 1.4e-124 451.1 523 70.6
CSS0014544 Camellia sinensis var. sinensis HOM05D003406 ORTHO05D004026 3.1e-124 449.9 509 71.9
PSO063G0746 Papaver somniferum HOM05D003406 ORTHO05D004026 8.9e-124 448.4 516 71.5
PSO561G0002 Papaver somniferum HOM05D003406 ORTHO05D004026 1.5e-123 447.6 516 71.7
Manes.11G004700 Manihot esculenta HOM05D003406 ORTHO05D004026 3.4e-123 446.4 491 74.5
Sc14g0005750 Simmondsia chinensis HOM05D003406 ORTHO05D004026 9.8e-123 444.9 515 71.1
VMungo1127G0085 Vigna mungo HOM05D003406 ORTHO05D004026 1.3e-122 444.5 518 63.9
FAN03G3378 Fragaria x ananassa HOM05D003406 ORTHO05D004026 8.3e-122 441.8 535 69.7
Gorai.011G213900 Gossypium raimondii HOM05D003406 ORTHO05D004026 8.3e-122 441.8 489 74.6
FvH4_7g02880 Fragaria vesca HOM05D003406 ORTHO05D004026 1.1e-121 441.4 534 70.0
Gohir.A10G183800 Gossypium hirsutum HOM05D003406 ORTHO05D004026 1.1e-121 441.4 523 71.1
Hma1.2p1_1396F.1_g280640 Hydrangea macrophylla HOM05D003406 ORTHO05D004026 1.4e-121 441.0 366 92.9
RcHm_v2.0_Chr1g0323831 Rosa chinensis HOM05D003406 ORTHO05D004026 3.2e-121 439.9 534 69.7
Haze_03074 Corylus avellana HOM05D003406 ORTHO05D004026 1.2e-120 438.0 505 72.5
Potri.003G197900 Populus trichocarpa HOM05D003406 ORTHO05D004026 1.2e-120 438.0 511 71.6
Glyma.13G198200 Glycine max HOM05D003406 ORTHO05D004026 2.7e-120 436.8 565 66.9
Gohir.D10G190800 Gossypium hirsutum HOM05D003406 ORTHO05D004026 3.5e-120 436.4 489 74.2
unitig_26.g9605 Utricularia gibba HOM05D003406 ORTHO05D004026 6.0e-120 435.6 514 58.0
CsaV3_5G024420 Cucumis sativus L. HOM05D003406 ORTHO05D004026 2.3e-119 433.7 592 67.9
Potri.T125206 Populus trichocarpa HOM05D003406 ORTHO05D004026 2.3e-119 433.7 519 69.7
HPP92_025009 Vanilla planifolia HOM05D003406 ORTHO05D004026 3.0e-119 433.3 538 69.1
THA.LOC104826724 Tarenaya hassleriana HOM05D003406 ORTHO05D004026 6.6e-119 432.2 518 70.5
ECA248G2072 Erigeron canadensis HOM05D003406 ORTHO05D004026 1.5e-118 431.0 520 70.4
Glyma.15G236500 Glycine max HOM05D003406 ORTHO05D004026 1.9e-118 430.6 484 73.3
MELO3C005161.2 Cucumis melo HOM05D003406 ORTHO05D004026 3.3e-118 429.9 589 67.9
Psat4g192120 Pisum sativum HOM05D003406 ORTHO05D004026 2.1e-117 427.2 585 65.0
EL10Ac2g02817 Beta vulgaris HOM05D003406 ORTHO05D004026 2.8e-117 426.8 493 71.4
Sed0018149 Sechium edule HOM05D003406 ORTHO05D004026 3.6e-117 426.4 581 68.5
HanXRQChr01g0004511 Helianthus annuus HOM05D003406 ORTHO05D004026 8.1e-117 425.2 507 71.4
Phvul.011G207400 Phaseolus vulgaris HOM05D003406 ORTHO05D004026 8.1e-117 425.2 517 69.8
Aqoxy4G02704 Aquilegia oxysepala HOM05D003406 ORTHO05D004026 1.4e-116 424.5 566 66.3
Duzib106G0689 Durio zibethinus HOM05D003406 ORTHO05D004026 1.4e-116 424.5 508 71.1
HanXRQChr15g0463071 Helianthus annuus HOM05D003406 ORTHO05D004026 4.0e-116 422.9 508 71.3
Lalb_Chr01g0007801 Lupinus albus HOM05D003406 ORTHO05D004026 5.2e-116 422.5 527 69.1
Zm00001eb140970 Zea mays HOM05D003406 ORTHO05D004026 6.8e-116 422.2 527 68.3
Ca_23943_v3 Cicer arietinum L. HOM05D003406 ORTHO05D004026 8.9e-116 421.8 517 69.4
Atru.chr12.1360 Acer truncatum HOM05D003406 ORTHO05D004026 7.6e-115 418.7 534 68.5
THA.LOC104819128 Tarenaya hassleriana HOM05D003406 ORTHO05D004026 2.2e-114 417.2 525 69.0
AUR62026878 Chenopodium quinoa HOM05D003406 ORTHO05D004026 6.4e-114 415.6 469 72.5
Lsat_1_v5_gn_1_115021 Lactuca sativa HOM05D003406 ORTHO05D004026 2.3e-111 407.1 526 69.0
Medtr8g038550 Medicago truncatula HOM05D003406 ORTHO05D004026 8.6e-111 405.2 581 64.5
Lalb_Chr19g0132381 Lupinus albus HOM05D003406 ORTHO05D004026 1.1e-110 404.8 537 66.9
Solyc08g067040.4 Solanum lycopersicum HOM05D003406 ORTHO05D004026 2.1e-109 400.6 538 67.8
Sopen08g020990 Solanum pennellii HOM05D003406 ORTHO05D004026 6.2e-109 399.1 538 67.7
AUR62037187 Chenopodium quinoa HOM05D003406 ORTHO05D004026 2.4e-108 397.1 473 66.2
Manes.04G160100 Manihot esculenta HOM05D003406 ORTHO05D004026 8.9e-108 395.2 480 71.0
Thhalv10012890m.g Eutrema salsugineum HOM05D003406 ORTHO05D004026 2.9e-106 390.2 572 63.6
AL6G24100 Arabidopsis lyrata HOM05D003406 ORTHO05D004026 1.1e-105 388.3 526 67.1
arahy.Tifrunner.gnm1.ann1.P8HZNX Arachis hypogaea HOM05D003406 ORTHO05D004026 1.1e-105 388.3 492 67.5
ATR0745G072 Amborella trichopoda HOM05D003406 ORTHO05D004026 4.6e-104 382.9 493 68.6
AT5G13480 Arabidopsis thaliana HOM05D003406 ORTHO05D004026 5.1e-103 379.4 530 66.4
A03p06010 Brassica napus HOM05D003406 ORTHO05D004026 1.1e-102 378.3 526 66.3
C03p07050 Brassica napus HOM05D003406 ORTHO05D004026 4.3e-102 376.3 526 66.3
Carub.0006s1164 Capsella rubella HOM05D003406 ORTHO05D004026 5.6e-102 375.9 516 66.9
BcaB01g05356 Brassica carinata HOM05D003406 ORTHO05D004026 1.8e-100 370.9 526 65.6
BraA03t09938Z Brassica rapa HOM05D003406 ORTHO05D004026 5.8e-99 365.9 548 63.9
Sp6g30540 Schrenkiella parvula HOM05D003406 ORTHO05D004026 3.5e-96 356.7 570 62.1
Aa31LG11G7380 Aethionema arabicum HOM05D003406 ORTHO05D004026 5.6e-94 349.4 506 64.0
Sabra03G0147300 Salix brachista HOM05D003406 ORTHO05D004026 4.8e-93 346.3 583 60.2
C02p06160 Brassica napus HOM05D003406 ORTHO05D004026 2.4e-89 334.0 510 64.3
Lj7A583T43 Lonicera japonica HOM05D003406 ORTHO05D004026 5.5e-89 332.8 465 66.7
CDE04G3459 Ceratophyllum demersum HOM05D003406 ORTHO05D004026 9.3e-89 332.0 337 74.2
BcaNung01887 Brassica carinata HOM05D003406 ORTHO05D004026 1.2e-88 331.6 511 64.6
BolC2t06560H Brassica oleracea HOM05D003406 ORTHO05D004026 3.5e-88 330.1 515 63.3
BcaNung01149 Brassica carinata HOM05D003406 ORTHO05D004026 7.9e-88 328.9 514 63.4
A02p01970 Brassica napus HOM05D003406 ORTHO05D004026 7.9e-88 328.9 511 63.8
AagrBONN_evm.TU.Sc2ySwM_369.461 Anthoceros agrestis HOM05D003406 ORTHO05D004026 1.0e-87 328.6 436 52.5
BraA02t05170Z Brassica rapa HOM05D003406 ORTHO05D004026 1.0e-87 328.6 515 63.1
PSO782G3285 Papaver somniferum HOM05D003406 ORTHO05D004026 2.8e-85 320.5 470 62.6
Mapoly0029s0111 Marchantia polymorpha HOM05D003406 ORTHO05D004026 1.1e-84 318.5 461 65.7
MBI02_g23406_MAGBIO Magnolia biondii HOM05D003406 ORTHO05D004026 3.2e-81 307.0 306 67.3
DCAR_031832 Daucus carota HOM05D003406 ORTHO05D004026 1.1e-76 292.0 242 81.4
Lj3g0018542 Lotus japonicus HOM05D003406 ORTHO05D004026 7.9e-72 275.8 432 63.9
RcHm_v2.0_Chr5g0010661 Rosa chinensis HOM05D003406 ORTHO05D004026 1.9e-70 271.2 457 63.7
SMO353G0072 Selaginella moellendorffii HOM05D003406 ORTHO05D004026 3.7e-69 266.9 423 64.8
Pp3c16_16500 Physcomitrium patens HOM05D003406 ORTHO05D004026 2.6e-67 260.8 498 58.0
MCO04G412 Micromonas commoda HOM05D003406 ORTHO05D004026 5.0e-66 256.5 364 55.8
SHI03990 Sapria himalayana HOM05D003406 ORTHO05D004026 1.1e-65 255.4 349 53.6
CARHR199960 Cardamine hirsuta HOM05D003406 ORTHO05D004026 6.7e-63 246.1 304 62.8
CBR_g16799 Chara braunii HOM05D003406 ORTHO05D004026 2.5e-62 244.2 429 61.8
FAN28G2604 Fragaria x ananassa HOM05D003406 ORTHO05D004026 3.7e-61 240.4 454 60.6
CBR_g22487 Chara braunii HOM05D003406 ORTHO05D004026 1.4e-60 238.4 427 61.4
FAN19G0629 Fragaria x ananassa HOM05D003406 ORTHO05D004026 5.3e-60 236.5 454 61.0
TPR.G36904 Trifolium pratense HOM05D003406 ORTHO05D004026 9.1e-60 235.7 173 67.1
TPR.G24634 Trifolium pratense HOM05D003406 ORTHO05D004026 4.5e-59 233.4 174 65.5
TPR.G36971 Trifolium pratense HOM05D003406 ORTHO05D004026 5.9e-59 233.0 218 60.1
FAN26G1924 Fragaria x ananassa HOM05D003406 ORTHO05D004026 7.7e-59 232.6 453 55.0
Ah.10g030390 Amaranthus hybridus HOM05D003406 ORTHO05D004026 2.5e-57 227.6 148 79.1
FAN09G0535 Fragaria x ananassa HOM05D003406 ORTHO05D004026 4.2e-57 226.9 427 52.7
AUR62037192 Chenopodium quinoa HOM05D003406 ORTHO05D004026 3.0e-55 220.7 189 58.2
SEGI_13935 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 1.8e-52 211.5 131 77.1
PRCOL_00004312 Prasinoderma coloniale HOM05D003406 ORTHO05D004026 4.2e-49 200.3 363 50.7
Aqoxy2G01593 Aquilegia oxysepala HOM05D003406 ORTHO05D004026 5.2e-47 193.4 378 34.9
FAN09G3514 Fragaria x ananassa HOM05D003406 ORTHO05D004026 1.7e-45 188.3 301 62.8
FAN27G1752 Fragaria x ananassa HOM05D003406 ORTHO05D004026 1.7e-45 188.3 301 62.8
FAN16G0070 Fragaria x ananassa HOM05D003406 ORTHO05D004026 3.1e-44 184.1 301 62.5
FAN23G2061 Fragaria x ananassa HOM05D003406 ORTHO05D004026 5.3e-44 183.3 244 43.4
FAN06G0645 Fragaria x ananassa HOM05D003406 ORTHO05D004026 1.6e-43 181.8 301 62.1
FAN16G0123 Fragaria x ananassa HOM05D003406 ORTHO05D004026 2.5e-41 174.5 301 55.1
Cre06.g251951 Chlamydomonas reinhardtii HOM05D003406 ORTHO05D004026 5.5e-41 173.3 389 37.8
AUR62037193 Chenopodium quinoa HOM05D003406 ORTHO05D015410 9.4e-41 172.6 251 39.4
FAN14G5538 Fragaria x ananassa HOM05D003406 ORTHO05D004026 1.6e-40 171.8 457 31.9
FvH4_6g22190 Fragaria vesca HOM05D003406 ORTHO05D004026 3.6e-40 170.6 351 33.9
RcHm_v2.0_Chr4g0404661 Rosa chinensis HOM05D003406 ORTHO05D004026 5.2e-39 166.8 432 48.1
SHI03989 Sapria himalayana HOM05D003406 ORTHO05D004026 5.7e-38 163.3 117 67.5
FAN11G1841 Fragaria x ananassa HOM05D003406 ORTHO05D004026 4.8e-37 160.2 301 55.8
Haze_26561 Corylus avellana HOM05D003406 ORTHO05D004026 6.3e-37 159.8 300 37.7
Os01g0951000 Oryza sativa ssp. japonica HOM05D003406 ORTHO05D004026 8.3e-37 159.5 104 75.0
ATR0568G096 Amborella trichopoda HOM05D003406 ORTHO05D004026 1.3e-34 152.1 190 50.0
RcHm_v2.0_Chr3g0482981 Rosa chinensis HOM05D003406 ORTHO05D004026 2.1e-32 144.8 371 60.1
RcHm_v2.0_Chr3g0482821 Rosa chinensis HOM05D003406 ORTHO05D004026 8.0e-32 142.9 372 59.7
FAN23G2758 Fragaria x ananassa HOM05D003406 ORTHO05D004026 3.0e-31 141.0 179 80.4
RcHm_v2.0_Chr3g0486211 Rosa chinensis HOM05D003406 ORTHO05D004026 3.0e-31 141.0 266 62.4
FAN14G3483 Fragaria x ananassa HOM05D003406 ORTHO05D004026 9.8e-30 136.0 175 46.3
FAN13G0969 Fragaria x ananassa HOM05D003406 ORTHO05D004026 2.2e-29 134.8 136 49.3
FAN11G4032 Fragaria x ananassa HOM05D003406 ORTHO05D004026 4.9e-29 133.7 175 45.1
FAN18G4486 Fragaria x ananassa HOM05D003406 ORTHO05D004026 8.3e-29 132.9 136 48.5
PSO782G3453 Papaver somniferum HOM05D003406 ORTHO05D004026 3.1e-28 131.0 150 51.3
FvH4_5g25490 Fragaria vesca HOM05D003406 ORTHO05D004026 4.1e-28 130.6 136 47.8
FvH4_5g25550 Fragaria vesca HOM05D003406 ORTHO05D004026 4.1e-28 130.6 136 47.8
DCAR_031833 Daucus carota HOM05D003406 ORTHO05D004026 1.7e-26 125.2 134 57.5
SEGI_30282 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 6.1e-24 116.7 88 59.1
FAN19G1643 Fragaria x ananassa HOM05D003406 ORTHO05D004026 2.0e-22 111.7 309 39.5
SMO231G0014 Selaginella moellendorffii HOM05D003406 ORTHO05D004026 2.2e-21 108.2 172 36.0
PSO561G0005 Papaver somniferum HOM05D003406 ORTHO05D004026 6.4e-21 106.7 118 55.1
SEGI_35311 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 5.9e-19 100.1 141 48.2
SEGI_34701 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 3.9e-18 97.4 53 73.6
Actinidia10171 Actinidia chinensis HOM05D003406 ORTHO05D004026 5.0e-18 97.1 102 59.8
SEGI_28183 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 1.5e-17 95.5 158 43.7
PGSC0003DMG400023151 Solanum tuberosum HOM05D003406 ORTHO05D004026 3.6e-16 90.9 105 50.5
BcaC05g28071 Brassica carinata HOM05D003406 ORTHO05D004026 4.7e-16 90.5 56 78.6
SEGI_28398 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 4.7e-16 90.5 62 67.7
Gohir.D10G058700 Gossypium hirsutum HOM05D003406 ORTHO05D004026 8.9e-15 86.3 64 68.8
C07p49630 Brassica napus HOM05D003406 ORTHO05D004026 7.5e-14 83.2 92 52.2
TPR.G20465 Trifolium pratense HOM05D003406 ORTHO05D004026 7.5e-14 83.2 53 79.2
Gorai.011G062800 Gossypium raimondii HOM05D003406 ORTHO05D004026 9.8e-14 82.8 107 48.6
C03p43350 Brassica napus HOM05D003406 ORTHO05D004026 1.7e-13 82.0 47 83.0
BolC3t16605H Brassica oleracea HOM05D003406 ORTHO05D004026 1.7e-13 82.0 47 83.0
FAN19G2649 Fragaria x ananassa HOM05D003406 ORTHO05D004026 1.1e-09 69.3 156 58.3
Gohir.D04G052700 Gossypium hirsutum HOM05D003406 ORTHO05D004026 1.1e-09 69.3 49 69.4
Gorai.012G058900 Gossypium raimondii HOM05D003406 ORTHO05D004026 1.1e-09 69.3 49 69.4
SEGI_32752 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 3.3e-09 67.8 32 90.6
Prupe.2G034000 Prunus persica HOM05D003614 ORTHO05D004156 2.8e-08 64.7 49 67.3
Actinidia13019 Actinidia chinensis HOM05D003406 ORTHO05D004026 4.7e-08 63.9 65 63.1
Actinidia19465 Actinidia chinensis HOM05D003406 ORTHO05D004026 4.7e-08 63.9 65 63.1
Aa31LG8G12390 Aethionema arabicum HOM05D003406 ORTHO05D030983 1.1e-07 62.8 74 41.9
C05p40950 Brassica napus HOM05D003406 ORTHO05D004026 6.8e-07 60.1 39 71.8


User provided reference genes

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