Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold117G32378 Striga asiatica HOM05D009140 ORTHO05D011213 1.4e-138 496.1 228 100.0
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 1.7e-19 100.5 120 38.3
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 6.2e-17 92.0 120 35.8
SGA_v2.0_scaffold12G06017 Striga asiatica HOM05D009140 ORTHO05D010636 1.4e-16 90.9 104 41.3
SGA_v2.0_scaffold134G34731 Striga asiatica HOM05D009140 ORTHO05D000004 2.9e-14 83.2 133 33.8
SGA_v2.0_scaffold132G34546 Striga asiatica HOM05D010565 ORTHO05D011213 8.3e-14 81.6 120 33.3
SGA_v2.0_scaffold127G33968 Striga asiatica HOM05D009140 ORTHO05D000004 1.4e-13 80.9 133 31.6
SGA_v2.0_scaffold380G50369 Striga asiatica HOM05D010565 ORTHO05D011213 2.4e-13 80.1 124 32.3
SGA_v2.0_scaffold43G16501 Striga asiatica HOM05D000007 ORTHO05D021020 2.4e-13 80.1 125 32.8
Cc01_g07280 Coffea canephora HOM05D000003 ORTHO05D000004 9.2e-13 78.2 65 49.2
Cc11_g12030 Coffea canephora HOM05D000003 ORTHO05D000004 1.2e-12 77.8 136 33.1
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 1.2e-12 77.8 118 34.7
SGA_v2.0_scaffold335G49110 Striga asiatica HOM05D001364 ORTHO05D001316 3.5e-12 76.3 108 36.1
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 4.6e-12 75.9 128 29.7
SGA_v2.0_scaffold53G19333 Striga asiatica HOM05D009140 ORTHO05D010636 4.6e-12 75.9 132 31.8
Cc04_g14660 Coffea canephora HOM05D000003 ORTHO05D000167 1.0e-11 74.7 76 42.1
Cc08_g06220 Coffea canephora HOM05D000003 ORTHO05D000004 5.1e-11 72.4 73 39.7
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 8.6e-11 71.6 128 28.9
EL10Ac2g04418 Beta vulgaris HOM05D000003 ORTHO05D000004 1.9e-10 70.5 110 33.6
SGA_v2.0_scaffold279G46783 Striga asiatica HOM05D005209 ORTHO05D006188 2.5e-10 70.1 118 31.4
SGA_v2.0_scaffold64G21963 Striga asiatica HOM05D000003 ORTHO05D000004 2.5e-10 70.1 120 31.7
EL10Ac1g01308 Beta vulgaris HOM05D000003 ORTHO05D000167 3.3e-10 69.7 108 34.3
EL10Ac4g08380 Beta vulgaris HOM05D000003 ORTHO05D000004 3.3e-10 69.7 115 33.0
EL10Ac7g17531 Beta vulgaris HOM05D000003 ORTHO05D000004 4.3e-10 69.3 109 34.9
SGA_v2.0_scaffold120G33020 Striga asiatica HOM05D000003 ORTHO05D000004 1.2e-09 67.8 76 35.5
SGA_v2.0_scaffold122G33296 Striga asiatica HOM05D000003 ORTHO05D000004 1.2e-09 67.8 126 29.4
SGA_v2.0_scaffold83G26428 Striga asiatica HOM05D000003 ORTHO05D051420 1.2e-09 67.8 118 33.1
SGA_v2.0_scaffold16G07893 Striga asiatica HOM05D016777 ORTHO05D026198 1.6e-09 67.4 103 35.0
EL10Ac1g01349 Beta vulgaris HOM05D003468 ORTHO05D002806 3.6e-09 66.2 115 32.2
PSO782G3645 Papaver somniferum HOM05D000003 ORTHO05D001026 4.7e-09 65.9 113 33.6
EL10Ac5g11069 Beta vulgaris HOM05D000003 ORTHO05D000004 6.2e-09 65.5 109 33.9
PSO017G4915 Papaver somniferum HOM05D000003 ORTHO05D000004 1.4e-08 64.3 103 31.1
SGA_v2.0_scaffold5G02882 Striga asiatica HOM05D001043 ORTHO05D001555 1.4e-08 64.3 126 31.7
SGA_v2.0_scaffold221G42693 Striga asiatica HOM05D002835 ORTHO05D003008 1.8e-08 63.9 105 32.4
PSO675G2188 Papaver somniferum HOM05D000003 ORTHO05D000004 2.3e-08 63.5 114 27.2
SGA_v2.0_scaffold139G35388 Striga asiatica HOM05D028223 ORTHO05D051408 2.3e-08 63.5 91 36.3
Aa31sc210G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.1e-08 63.2 135 29.6
CANSAT56G1417 Cannabis sativa HOM05D000003 ORTHO05D000004 3.1e-08 63.2 165 31.5
PSO782G1635 Papaver somniferum HOM05D000003 ORTHO05D000004 3.1e-08 63.2 125 30.4
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 3.1e-08 63.2 115 28.7
Aqoxy3G02165 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.0e-08 62.8 115 32.2
Aa31LG5G23430 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.2e-08 62.4 109 32.1
TPR.G36801 Trifolium pratense HOM05D000003 ORTHO05D000004 5.2e-08 62.4 111 30.6
Aa31LG8G16480 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.9e-08 61.6 109 32.1
CANSAT54G2709 Cannabis sativa HOM05D000003 ORTHO05D000004 8.9e-08 61.6 126 29.4
SGA_v2.0_scaffold65G22183 Striga asiatica HOM05D009140 ORTHO05D010215 8.9e-08 61.6 75 37.3
Aa31LG9G9420 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.2e-07 61.2 105 31.4
EL10Ac8g19164 Beta vulgaris HOM05D000003 ORTHO05D000167 1.2e-07 61.2 123 27.6
BcaB05g22054 Brassica carinata HOM05D000003 ORTHO05D001498 1.2e-07 61.2 111 34.2
BraA08t32601Z Brassica rapa HOM05D000003 ORTHO05D000925 1.2e-07 61.2 132 32.6
SGA_v2.0_scaffold419G51290 Striga asiatica HOM05D010565 ORTHO05D011213 1.2e-07 61.2 46 45.7
Aa31LG6G10540 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.5e-07 60.8 109 31.2
BcaC05g28305 Brassica carinata HOM05D000003 ORTHO05D001091 1.5e-07 60.8 55 49.1
PSO063G6787 Papaver somniferum HOM05D000003 ORTHO05D001026 1.5e-07 60.8 121 28.1
BolC1t02319H Brassica oleracea HOM05D000003 ORTHO05D000004 2.0e-07 60.5 114 34.2
AUR62002762 Chenopodium quinoa HOM05D001201 ORTHO05D001100 2.0e-07 60.5 108 32.4
BolC3t19864H Brassica oleracea HOM05D001239 ORTHO05D000925 2.6e-07 60.1 65 46.2
PSO170G3596 Papaver somniferum HOM05D000003 ORTHO05D000004 2.6e-07 60.1 160 28.1
RcHm_v2.0_Chr7g0182091 Rosa chinensis HOM05D000003 ORTHO05D000004 2.6e-07 60.1 148 25.0
SGA_v2.0_scaffold191G40503 Striga asiatica HOM05D000003 ORTHO05D000004 2.6e-07 60.1 101 31.7
Aa31LG11G6710 Aethionema arabicum HOM05D000003 ORTHO05D009772 3.4e-07 59.7 116 27.6
QL04p041207 Quercus lobata HOM05D000003 ORTHO05D000004 3.4e-07 59.7 135 30.4
SGA_v2.0_scaffold1G00790 Striga asiatica HOM05D010565 ORTHO05D011213 3.4e-07 59.7 54 40.7
Atru.chr2.2708 Acer truncatum HOM05D000003 ORTHO05D000022 4.4e-07 59.3 134 28.4
Aa31LG11G5340 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.4e-07 59.3 104 29.8
Aa31sc142G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.4e-07 59.3 112 29.5
BcaB06g26350 Brassica carinata HOM05D001350 ORTHO05D001091 4.4e-07 59.3 57 45.6
CANSAT56G0533 Cannabis sativa HOM05D000003 ORTHO05D000004 5.8e-07 58.9 118 28.0
Aa31LG10G7630 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.6e-07 58.5 113 31.9
A05p27460 Brassica napus HOM05D000003 ORTHO05D001091 7.6e-07 58.5 127 30.7
CANSAT80G2424 Cannabis sativa HOM05D000003 ORTHO05D000004 7.6e-07 58.5 58 39.7
AUR62003020 Chenopodium quinoa HOM05D000003 ORTHO05D000004 7.6e-07 58.5 75 33.3
PSO135G0184 Papaver somniferum HOM05D000003 ORTHO05D000004 7.6e-07 58.5 96 33.3
PSO135G0230 Papaver somniferum HOM05D000003 ORTHO05D000004 7.6e-07 58.5 96 33.3
PSO170G3478 Papaver somniferum HOM05D000003 ORTHO05D000004 7.6e-07 58.5 113 31.9
Sed0012627 Sechium edule HOM05D000003 ORTHO05D000004 7.6e-07 58.5 114 28.1
Aa31sc56G70 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.9e-07 58.2 105 28.6
BcaC02g11021 Brassica carinata HOM05D000003 ORTHO05D000925 9.9e-07 58.2 63 46.0
BcaC05g27730 Brassica carinata HOM05D000003 ORTHO05D000004 9.9e-07 58.2 107 35.5
BolC6t37477H Brassica oleracea HOM05D000003 ORTHO05D001498 9.9e-07 58.2 109 31.2
QL09p012929 Quercus lobata HOM05D000003 ORTHO05D000004 9.9e-07 58.2 74 36.5
SGA_v2.0_scaffold76G25079 Striga asiatica HOM05D009140 ORTHO05D000004 9.9e-07 58.2 102 35.3
SGA_v2.0_scaffold93G28364 Striga asiatica HOM05D009140 ORTHO05D010636 9.9e-07 58.2 111 35.1
Aa31LG8G12860 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.3e-06 57.8 120 27.5
BraA02t04989Z Brassica rapa HOM05D000003 ORTHO05D000925 1.3e-06 57.8 116 31.9
SGA_v2.0_scaffold17G08016 Striga asiatica HOM05D009140 ORTHO05D010215 1.3e-06 57.8 75 36.0
Aa31LG9G15190 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.7e-06 57.4 107 27.1
Aa31sc324G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.7e-06 57.4 59 40.7
Aa31sc75G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.7e-06 57.4 60 40.0
BraA09t38717Z Brassica rapa HOM05D004976 ORTHO05D004851 1.7e-06 57.4 71 38.0
FvH4_6g16031 Fragaria vesca HOM05D000003 ORTHO05D009449 1.7e-06 57.4 116 31.9
QL02p011410 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-06 57.4 128 32.0
SGA_v2.0_scaffold67G22785 Striga asiatica HOM05D010565 ORTHO05D011213 1.7e-06 57.4 44 43.2
Atru.chr1.1484 Acer truncatum HOM05D000003 ORTHO05D000022 2.2e-06 57.0 136 27.2
Aa31LG5G22350 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.2e-06 57.0 105 28.6
Aqoxy2G00807 Aquilegia oxysepala HOM05D000003 ORTHO05D008897 2.2e-06 57.0 122 30.3
EL10Ac6g14227 Beta vulgaris HOM05D000003 ORTHO05D000004 2.2e-06 57.0 124 29.8
EL10Ac8g18990 Beta vulgaris HOM05D000003 ORTHO05D000004 2.2e-06 57.0 108 29.6
BcaNung00070 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-06 57.0 55 43.6
BraA02t06467Z Brassica rapa HOM05D001239 ORTHO05D000925 2.2e-06 57.0 120 29.2
Aa31LG10G9450 Aethionema arabicum HOM05D000003 ORTHO05D001091 2.9e-06 56.6 109 33.9
Aa31LG11G11010 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.9e-06 56.6 107 32.7
Aa31LG7G12380 Aethionema arabicum HOM05D000003 ORTHO05D009772 2.9e-06 56.6 59 37.3
BolC4t22146H Brassica oleracea HOM05D001239 ORTHO05D000925 2.9e-06 56.6 109 31.2
BolC7t41032H Brassica oleracea HOM05D000003 ORTHO05D000004 2.9e-06 56.6 108 27.8
AUR62005341 Chenopodium quinoa HOM05D000003 ORTHO05D000004 2.9e-06 56.6 60 38.3
AUR62017255 Chenopodium quinoa HOM05D000003 ORTHO05D000004 2.9e-06 56.6 117 33.3
PSO210G0419 Papaver somniferum HOM05D000003 ORTHO05D001026 2.9e-06 56.6 113 29.2
BcaB02g10370 Brassica carinata HOM05D000003 ORTHO05D000411 3.7e-06 56.2 109 30.3
Sp7g02710 Schrenkiella parvula HOM05D000003 ORTHO05D000925 3.7e-06 56.2 108 29.6
Aa31LG1G4180 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.9e-06 55.8 106 29.2
CANSAT11G0084 Cannabis sativa HOM05D000003 ORTHO05D000004 4.9e-06 55.8 108 28.7
CANSAT11G1079 Cannabis sativa HOM05D000003 ORTHO05D000004 4.9e-06 55.8 108 28.7
CANSAT54G1690 Cannabis sativa HOM05D000003 ORTHO05D000004 4.9e-06 55.8 109 28.4
COL.COLO4_05866 Corchorus olitorius HOM05D012148 ORTHO05D000004 4.9e-06 55.8 106 31.1
PSO223G0068 Papaver somniferum HOM05D001060 ORTHO05D000905 4.9e-06 55.8 97 32.0
AT4G29090 Arabidopsis thaliana HOM05D000003 ORTHO05D000004 6.4e-06 55.5 111 27.0
BcaB06g29528 Brassica carinata HOM05D000003 ORTHO05D001498 6.4e-06 55.5 109 29.4
FvH4_4g16971 Fragaria vesca HOM05D000003 ORTHO05D000004 6.4e-06 55.5 141 28.4
PSO210G6886 Papaver somniferum HOM05D000003 ORTHO05D001026 6.4e-06 55.5 118 29.7
QL04p070512 Quercus lobata HOM05D008417 ORTHO05D010741 6.4e-06 55.5 122 30.3
QL05p078226 Quercus lobata HOM05D000003 ORTHO05D000004 6.4e-06 55.5 106 28.3
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 6.4e-06 55.5 113 31.0
Aa31LG5G20940 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.4e-06 55.1 103 27.2
Aa31sc58G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.4e-06 55.1 77 36.4
BcaB01g01579 Brassica carinata HOM05D000003 ORTHO05D001498 8.4e-06 55.1 109 29.4
BraA01t03685Z Brassica rapa HOM05D001239 ORTHO05D000925 8.4e-06 55.1 59 45.8
CANSAT11G2283 Cannabis sativa HOM05D000003 ORTHO05D000004 8.4e-06 55.1 106 29.2
PSO349G0072 Papaver somniferum HOM05D003407 ORTHO05D001026 8.4e-06 55.1 61 37.7


User provided reference genes

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