Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold115G32146 Striga asiatica HOM05D004426 ORTHO05D005417 0.0e+00 4069.2 2151 100.0
Migut.J00694 Erythranthe guttata HOM05D004426 ORTHO05D005417 0.0e+00 2564.3 2229 64.6
MSTRG.5892 Avicennia marina HOM05D004426 ORTHO05D005417 0.0e+00 2518.4 2213 64.5
Oeu035645.2 Olea europaea HOM05D004426 ORTHO05D005417 0.0e+00 2209.9 2199 58.2
Dinv12344 Davidia involucrata HOM05D004426 ORTHO05D005417 0.0e+00 2097.0 2226 56.3
Cc06_g06650 Coffea canephora HOM05D004426 ORTHO05D005417 0.0e+00 2080.1 2199 55.9
GSVIVG01020162001 Vitis vinifera HOM05D004426 ORTHO05D005417 0.0e+00 2011.1 2238 53.4
Actinidia37752 Actinidia chinensis HOM05D004426 ORTHO05D005417 0.0e+00 1991.5 2235 52.5
Nitab4.5_0004363g0030 Nicotiana tabacum HOM05D004426 ORTHO05D005417 0.0e+00 1978.8 2193 54.3
Solyc03g020020.3 Solanum lycopersicum HOM05D004426 ORTHO05D005417 0.0e+00 1957.6 2235 53.2
Sopen03g029610 Solanum pennellii HOM05D004426 ORTHO05D005417 0.0e+00 1956.0 2235 53.2
Nitab4.5_0001495g0100 Nicotiana tabacum HOM05D004426 ORTHO05D005417 0.0e+00 1948.3 2201 53.7
Dinv31767 Davidia involucrata HOM05D004426 ORTHO05D005417 0.0e+00 1947.2 1717 61.7
Peaxi162Scf00171g00133 Petunia axillaris HOM05D004426 ORTHO05D005417 0.0e+00 1925.6 2178 53.0
QL07p036440 Quercus lobata HOM05D004426 ORTHO05D005417 0.0e+00 1914.8 2198 53.1
Gorai.009G393700 Gossypium raimondii HOM05D004426 ORTHO05D005417 0.0e+00 1880.9 2233 51.3
RcHm_v2.0_Chr3g0476141 Rosa chinensis HOM05D004426 ORTHO05D005417 0.0e+00 1880.9 2213 52.1
Prupe.7G093800 Prunus persica HOM05D004426 ORTHO05D005417 0.0e+00 1875.9 2220 51.4
Cfa020044 Carpinus fangiana HOM05D004426 ORTHO05D005417 0.0e+00 1873.6 2206 52.0
Atru.chr8.1340 Acer truncatum HOM05D004426 ORTHO05D005417 0.0e+00 1856.3 2226 51.0
Thecc.05G105900 Theobroma cacao HOM05D004426 ORTHO05D005417 0.0e+00 1847.4 2225 50.7
FvH4_6g20410 Fragaria vesca HOM05D004426 ORTHO05D005417 0.0e+00 1835.8 2211 50.7
Manes.09G046200 Manihot esculenta HOM05D004426 ORTHO05D005417 0.0e+00 1835.5 2217 50.4
COL.COLO4_29556 Corchorus olitorius HOM05D004426 ORTHO05D005417 0.0e+00 1834.7 2212 51.4
DCAR_020696 Daucus carota HOM05D004426 ORTHO05D005417 0.0e+00 1832.4 2156 51.3
Ciclev10010887m.g Citrus clementina HOM05D004426 ORTHO05D005417 0.0e+00 1826.6 2233 49.5
Potri.016G069100 Populus trichocarpa HOM05D004426 ORTHO05D005417 0.0e+00 1820.4 2217 50.4
CiPaw.10G018400 Carya illinoinensis HOM05D004426 ORTHO05D005417 0.0e+00 1820.1 2215 51.5
FAN05G1531 Fragaria x ananassa HOM05D004426 ORTHO05D005417 0.0e+00 1812.7 2244 50.2
arahy.Tifrunner.gnm1.ann1.C5PQVK Arachis hypogaea HOM05D004426 ORTHO05D005417 0.0e+00 1808.1 2210 50.5
TAR369G0229 Trochodendron aralioides HOM05D004426 ORTHO05D005417 0.0e+00 1804.3 2311 48.5
FAN09G4366 Fragaria x ananassa HOM05D004426 ORTHO05D005417 0.0e+00 1800.4 2273 49.4
vmacro07479 Vaccinium macrocarpon HOM05D004426 ORTHO05D005417 0.0e+00 1799.6 2255 50.3
Glyma.02G195600 Glycine max HOM05D004426 ORTHO05D005417 0.0e+00 1798.9 2207 50.3
Glyma.10G082100 Glycine max HOM05D004426 ORTHO05D005417 0.0e+00 1796.9 2196 50.5
Lj5g0003460 Lotus japonicus HOM05D004426 ORTHO05D005417 0.0e+00 1794.6 2223 50.4
FAN05G5173 Fragaria x ananassa HOM05D004426 ORTHO05D005417 0.0e+00 1793.1 2252 49.6
TWI74G0602 Tripterygium wilfordii HOM05D004426 ORTHO05D005417 0.0e+00 1788.9 2211 50.0
Phvul.007G267500 Phaseolus vulgaris HOM05D004426 ORTHO05D005417 0.0e+00 1788.5 2208 50.0
Lalb_Chr06g0172651 Lupinus albus HOM05D004426 ORTHO05D005417 0.0e+00 1784.2 2226 50.4
MD14G1040500 Malus domestica HOM05D004426 ORTHO05D005417 0.0e+00 1781.1 2213 49.8
arahy.Tifrunner.gnm1.ann1.S879XT Arachis hypogaea HOM05D004426 ORTHO05D005417 0.0e+00 1780.4 2210 50.0
CANSAT64G0287 Cannabis sativa HOM05D004426 ORTHO05D005417 0.0e+00 1778.8 2229 50.0
FAN02G2855 Fragaria x ananassa HOM05D004426 ORTHO05D005417 0.0e+00 1771.9 2287 48.9
Ca_11691_v3 Cicer arietinum L. HOM05D004426 ORTHO05D005417 0.0e+00 1770.0 2213 50.2
TPR.G2812 Trifolium pratense HOM05D004426 ORTHO05D005417 0.0e+00 1759.6 2211 49.9
Eucgr.A02578 Eucalyptus grandis HOM05D004426 ORTHO05D005417 0.0e+00 1757.7 2223 49.6
Sabra16G0070000 Salix brachista HOM05D004426 ORTHO05D005417 0.0e+00 1751.5 2258 49.0
Nn6g34673 Nelumbo nucifera HOM05D004426 ORTHO05D005417 0.0e+00 1745.3 2304 48.8
HanXRQChr13g0398531 Helianthus annuus HOM05D004426 ORTHO05D005417 0.0e+00 1738.4 2111 50.5
Sc22g0002960 Simmondsia chinensis HOM05D004426 ORTHO05D005417 0.0e+00 1731.1 1907 52.4
PGR004G1788 Punica granatum HOM05D004426 ORTHO05D005417 0.0e+00 1726.5 2190 48.9
Medtr1g056800 Medicago truncatula HOM05D004426 ORTHO05D005417 0.0e+00 1715.3 2211 48.6
ECA233G4189 Erigeron canadensis HOM05D004426 ORTHO05D005417 0.0e+00 1713.4 2146 49.1
Aqoxy1G00646 Aquilegia oxysepala HOM05D004426 ORTHO05D005417 0.0e+00 1706.4 2305 48.2
Psat6g115600 Pisum sativum HOM05D004426 ORTHO05D005417 0.0e+00 1705.3 2245 48.3
EL10Ac5g11771 Beta vulgaris HOM05D004426 ORTHO05D005417 0.0e+00 1696.0 2096 49.1
Lsat_1_v5_gn_6_33801 Lactuca sativa HOM05D004426 ORTHO05D005417 0.0e+00 1692.6 2128 50.0
ClCG10G018280 Citrullus lanatus HOM05D004426 ORTHO05D005417 0.0e+00 1679.5 2235 48.2
MELO3C009545.2 Cucumis melo HOM05D004426 ORTHO05D005417 0.0e+00 1674.1 2192 47.3
CsaV3_3G038030 Cucumis sativus L. HOM05D004426 ORTHO05D005417 0.0e+00 1667.1 2216 48.0
CSS0006601 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 0.0e+00 1666.7 1391 62.1
CSS0032246 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 0.0e+00 1663.7 1391 62.1
PSO339G1314 Papaver somniferum HOM05D004426 ORTHO05D005417 0.0e+00 1662.1 2284 46.4
PSO384G1970 Papaver somniferum HOM05D004426 ORTHO05D005417 0.0e+00 1651.3 2279 46.5
Oeu036110.1 Olea europaea HOM05D004426 ORTHO05D005417 0.0e+00 1649.4 1249 68.1
Sed0007001 Sechium edule HOM05D004426 ORTHO05D005417 0.0e+00 1639.8 2211 47.1
AUR62040133 Chenopodium quinoa HOM05D004426 ORTHO05D005417 0.0e+00 1635.9 2117 47.5
Gohir.D04G091700 Gossypium hirsutum HOM05D004426 ORTHO05D005417 0.0e+00 1617.1 2042 49.7
AUR62027347 Chenopodium quinoa HOM05D004426 ORTHO05D005417 0.0e+00 1597.8 2068 47.6
THA.LOC104816640 Tarenaya hassleriana HOM05D004426 ORTHO05D005417 0.0e+00 1594.3 2196 46.4
Gohir.A04G053650 Gossypium hirsutum HOM05D004426 ORTHO05D005417 0.0e+00 1593.2 2042 48.7
VMungo0720G0551 Vigna mungo HOM05D004426 ORTHO05D005417 0.0e+00 1591.2 2120 48.1
Ah.12g059670 Amaranthus hybridus HOM05D004426 ORTHO05D005417 0.0e+00 1587.4 2201 46.2
TAR375G1129 Trochodendron aralioides HOM05D004426 ORTHO05D005417 0.0e+00 1586.6 2191 46.9
AL3G16340 Arabidopsis lyrata HOM05D004426 ORTHO05D005417 0.0e+00 1580.5 2201 46.1
Thhalv10019873m.g Eutrema salsugineum HOM05D004426 ORTHO05D005417 0.0e+00 1580.5 2189 46.0
AT3G05680 Arabidopsis thaliana HOM05D004426 ORTHO05D005417 0.0e+00 1568.1 2202 46.0
CARHR080130 Cardamine hirsuta HOM05D004426 ORTHO05D005417 0.0e+00 1555.4 2191 45.7
Sp3g04560 Schrenkiella parvula HOM05D004426 ORTHO05D005417 0.0e+00 1548.5 2188 45.6
BcaB04g19244 Brassica carinata HOM05D004426 ORTHO05D005417 0.0e+00 1540.4 2200 45.1
A03p34260 Brassica napus HOM05D004426 ORTHO05D005417 0.0e+00 1537.7 2178 45.5
unitig_578.g15811 Utricularia gibba HOM05D004426 ORTHO05D005417 0.0e+00 1526.9 2191 46.5
C03p41680 Brassica napus HOM05D004426 ORTHO05D005417 0.0e+00 1524.2 2177 45.2
Carub.0003s0502 Capsella rubella HOM05D004426 ORTHO05D005417 0.0e+00 1523.5 2195 45.1
BraA03t12600Z Brassica rapa HOM05D004426 ORTHO05D005417 0.0e+00 1520.0 2194 45.1
Aa31LG5G16100 Aethionema arabicum HOM05D004426 ORTHO05D005417 0.0e+00 1516.9 2205 44.9
MD12G1041400 Malus domestica HOM05D004426 ORTHO05D005417 0.0e+00 1502.3 1396 57.3
BolC3t16451H Brassica oleracea HOM05D004426 ORTHO05D005417 0.0e+00 1495.3 2198 44.4
ATR0665G194 Amborella trichopoda HOM05D004426 ORTHO05D005417 0.0e+00 1466.8 1806 48.5
Haze_20160 Corylus avellana HOM05D004426 ORTHO05D005417 0.0e+00 1449.5 1425 55.9
HPP92_005908 Vanilla planifolia HOM05D004426 ORTHO05D005417 0.0e+00 1330.9 1975 43.3
Zm00001eb220020 Zea mays HOM05D004426 ORTHO05D005417 0.0e+00 1312.7 2257 40.9
Lj1A1205T55 Lonicera japonica HOM05D004426 ORTHO05D005417 1.2e-292 1011.1 817 65.5
FAN14G5903 Fragaria x ananassa HOM05D004426 ORTHO05D005417 4.0e-275 953.0 1458 45.1
MBI03_g28304_MAGBIO Magnolia biondii HOM05D004426 ORTHO05D005417 5.8e-266 922.5 1616 41.6
Rhsim04G0136900 Rhododendron simsii HOM05D004426 ORTHO05D005417 9.6e-245 852.0 1317 41.6
SHI25008 Sapria himalayana HOM05D004426 ORTHO05D000002 1.5e-237 828.2 1116 43.8
Duzib093G0840 Durio zibethinus HOM05D004426 ORTHO05D005417 2.1e-223 781.2 1225 45.1
Lj1A1205G57 Lonicera japonica HOM05D004426 ORTHO05D005417 1.3e-220 771.9 1350 41.7
FAN09G0172 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.3e-217 761.9 1339 42.0
Cpa.g.sc104.21 Carica papaya HOM05D004426 ORTHO05D005417 2.0e-194 684.9 1243 41.5
Mapoly0014s0197 Marchantia polymorpha HOM05D004426 ORTHO05D005417 1.6e-191 675.2 1810 31.9
CDE04G2905 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 5.0e-161 573.9 485 61.2
CDE07G0138 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 1.2e-149 536.2 932 42.0
Pp3c22_17700 Physcomitrium patens HOM05D004426 ORTHO05D005417 1.3e-140 506.1 1670 28.6
SEGI_03524 Sequoiadendron giganteum HOM05D004426 ORTHO05D005417 3.4e-125 454.9 426 55.9
AagrBONN_evm.TU.Sc2ySwM_368.1933 Anthoceros agrestis HOM05D004426 ORTHO05D005417 4.2e-123 448.0 2023 25.0
SEGI_22283 Sequoiadendron giganteum HOM05D004426 ORTHO05D005417 6.2e-119 434.1 800 39.5
CAN.G861.37 Capsicum annuum HOM05D004426 ORTHO05D005417 1.1e-115 423.3 937 41.5
Rhsim04G0099300 Rhododendron simsii HOM05D004426 ORTHO05D005417 4.5e-109 401.4 648 40.6
Duzib093G0602 Durio zibethinus HOM05D004426 ORTHO05D005417 5.1e-105 387.9 347 62.2
Cpa.g.sc104.20 Carica papaya HOM05D004426 ORTHO05D005417 8.7e-105 387.1 903 34.9
CSS0033092 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 1.8e-97 362.8 840 43.1
CSS0017834 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 2.3e-97 362.5 840 43.1
PGSC0003DMG400015284 Solanum tuberosum HOM05D004426 ORTHO05D005417 1.7e-95 356.3 277 65.7
BcaB04g19248 Brassica carinata HOM05D004426 ORTHO05D005417 5.7e-88 331.3 1024 34.3
Haze_20162 Corylus avellana HOM05D004426 ORTHO05D005417 1.5e-83 316.6 818 39.4
CDE04G3616 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 3.2e-75 288.9 389 43.4
MBI03_g28305_MAGBIO Magnolia biondii HOM05D004426 ORTHO05D005417 2.1e-74 286.2 310 51.6
CBR_g906 Chara braunii HOM05D004426 ORTHO05D005417 6.8e-73 281.2 1536 23.4
RcHm_v2.0_Chr3g0476171 Rosa chinensis HOM05D004426 ORTHO05D005417 9.8e-72 277.3 214 66.8
Actinidia03882 Actinidia chinensis HOM05D004426 ORTHO05D005417 8.6e-68 264.2 163 77.9
Psat0s2215g0200 Pisum sativum HOM05D004426 ORTHO05D005417 2.8e-58 232.6 330 43.0
CDE07G0146 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 4.7e-58 231.9 153 73.9
Psat6g150080 Pisum sativum HOM05D004426 ORTHO05D005417 1.3e-52 213.8 330 41.5
Oeu036109.3 Olea europaea HOM05D004426 ORTHO05D005417 6.8e-49 201.4 443 40.6
Psat2g147520 Pisum sativum HOM05D001362 ORTHO05D001310 2.3e-41 176.4 153 56.9
Actinidia03991 Actinidia chinensis HOM05D004426 ORTHO05D005417 4.9e-39 168.7 112 73.2
Os03g0554950 Oryza sativa ssp. japonica HOM05D004426 ORTHO05D005417 2.4e-38 166.4 193 46.1
Dinv31766 Davidia involucrata HOM05D004426 ORTHO05D005417 3.6e-34 152.5 446 35.9
Psat2g053520 Pisum sativum HOM05D004426 ORTHO05D005417 5.2e-33 148.7 330 34.2
TPR.G15240 Trifolium pratense HOM05D004426 ORTHO05D005417 5.2e-33 148.7 172 66.3
Psat0s2215g0120 Pisum sativum HOM05D004426 ORTHO05D005417 9.9e-32 144.4 115 63.5
CDE04G2111 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 1.4e-22 114.0 219 33.8
Os03g0554900 Oryza sativa ssp. japonica HOM05D004426 ORTHO05D005417 1.4e-22 114.0 663 32.1
Actinidia03883 Actinidia chinensis HOM05D004426 ORTHO05D005417 9.3e-22 111.3 155 39.4
CDE04G0059 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 4.6e-21 109.0 337 31.5
SHI25011 Sapria himalayana HOM05D000023 ORTHO05D000014 7.8e-21 108.2 68 70.6
MD12G1041200 Malus domestica HOM05D004426 ORTHO05D005417 2.5e-19 103.2 431 32.7
Mapoly0074s0069 Marchantia polymorpha HOM05D004426 ORTHO05D005417 3.9e-12 79.3 133 33.1
BNapus_Darmor_BZH_scaffold_118p00130 Brassica napus HOM05D004426 ORTHO05D005417 5.6e-11 75.5 195 30.8
Actinidia03993 Actinidia chinensis HOM05D004426 ORTHO05D005417 1.1e-09 71.2 107 44.9
Psat2g116240 Pisum sativum HOM05D004426 ORTHO05D005417 1.8e-09 70.5 227 33.0
CDE04G1213 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 4.0e-09 69.3 185 45.9
CDE07G2012 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 7.6e-08 65.1 343 35.0
Hund10805 Selenicereus undatus HOM05D001165 ORTHO05D000006 6.4e-07 62.0 45 71.1
Hund10806 Selenicereus undatus HOM05D008000 ORTHO05D010275 3.2e-06 59.7 65 52.3
Actinidia03885 Actinidia chinensis HOM05D004426 ORTHO05D005417 7.1e-06 58.5 99 42.4
Actinidia03992 Actinidia chinensis HOM05D004426 ORTHO05D005417 9.3e-06 58.2 92 40.2


User provided reference genes

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