Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold115G32097 Striga asiatica HOM05D006010 ORTHO05D007381 1.7e-169 599.4 325 100.0
MSTRG.15654 Avicennia marina HOM05D006010 ORTHO05D007381 2.1e-79 300.1 325 57.2
SalBow1G7757 Salvia bowleyana HOM05D006010 ORTHO05D007381 1.2e-77 294.3 330 56.7
Migut.K00936 Erythranthe guttata HOM05D006010 ORTHO05D007381 6.2e-71 271.9 320 55.6
Oeu048940.2 Olea europaea HOM05D006010 ORTHO05D007381 9.6e-64 248.1 350 51.1
Peaxi162Scf00464g00430 Petunia axillaris HOM05D006010 ORTHO05D007381 8.1e-63 245.0 332 51.2
PGSC0003DMG400013242 Solanum tuberosum HOM05D006010 ORTHO05D007381 4.0e-62 242.7 332 50.9
Sopen11g006280 Solanum pennellii HOM05D006010 ORTHO05D007381 6.9e-62 241.9 332 49.7
Hma1.2p1_0249F.1_g102390 Hydrangea macrophylla HOM05D006010 ORTHO05D007381 1.2e-61 241.1 321 52.6
CAN.G222.64 Capsicum annuum HOM05D006010 ORTHO05D007381 4.5e-61 239.2 332 50.0
Cc02_g11480 Coffea canephora HOM05D006010 ORTHO05D007381 6.4e-60 235.3 321 48.9
unitig_0.g1692 Utricularia gibba HOM05D006010 ORTHO05D007381 4.6e-58 229.2 335 47.8
Actinidia35721 Actinidia chinensis HOM05D006010 ORTHO05D007381 1.8e-57 227.3 328 49.1
Solyc11g011490.2 Solanum lycopersicum HOM05D006010 ORTHO05D007381 2.3e-57 226.9 257 54.1
Medtr5g077800 Medicago truncatula HOM05D006010 ORTHO05D007381 3.3e-56 223.0 320 47.5
Prupe.2G048000 Prunus persica HOM05D006010 ORTHO05D007381 9.6e-56 221.5 320 46.2
Psat2g045640 Pisum sativum HOM05D006010 ORTHO05D007381 2.1e-55 220.3 328 47.3
arahy.Tifrunner.gnm1.ann1.14A9Q3 Arachis hypogaea HOM05D006010 ORTHO05D007381 2.8e-55 219.9 328 49.7
arahy.Tifrunner.gnm1.ann1.RW4QB8 Arachis hypogaea HOM05D006010 ORTHO05D007381 2.8e-55 219.9 323 48.9
TWI53G0527 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 4.8e-55 219.2 328 47.3
arahy.Tifrunner.gnm1.ann1.ZG5C6W Arachis hypogaea HOM05D006010 ORTHO05D007381 6.2e-55 218.8 322 48.4
Ca_05962_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 8.1e-55 218.4 325 48.6
Rhsim10G0180400 Rhododendron simsii HOM05D006010 ORTHO05D007381 1.4e-54 217.6 310 48.4
Lj4g0009716 Lotus japonicus HOM05D006010 ORTHO05D007381 6.9e-54 215.3 318 47.2
PGR004G1862 Punica granatum HOM05D006010 ORTHO05D007381 1.2e-53 214.5 321 46.4
EL10Ac3g05516 Beta vulgaris HOM05D006010 ORTHO05D007381 7.6e-53 211.8 323 46.7
MD02G1273300 Malus domestica HOM05D006010 ORTHO05D007381 9.9e-53 211.5 321 44.5
Lalb_Chr10g0104261 Lupinus albus HOM05D006010 ORTHO05D007381 1.3e-52 211.1 325 47.4
CiPaw.03G074500 Carya illinoinensis HOM05D006010 ORTHO05D007381 1.7e-52 210.7 320 45.0
Atru.chr11.39 Acer truncatum HOM05D006010 ORTHO05D007381 2.9e-52 209.9 321 48.0
Sed0022983 Sechium edule HOM05D006010 ORTHO05D007381 1.1e-51 208.0 318 46.2
Cpa.g.sc116.81 Carica papaya HOM05D006010 ORTHO05D007381 2.4e-51 206.8 377 44.3
Potri.017G135500 Populus trichocarpa HOM05D006010 ORTHO05D007381 3.2e-51 206.5 327 48.0
Haze_14288 Corylus avellana HOM05D006010 ORTHO05D007381 7.1e-51 205.3 320 47.5
Cfa007784 Carpinus fangiana HOM05D006010 ORTHO05D007381 2.1e-50 203.8 327 46.8
Glyma.02G082600 Glycine max HOM05D006010 ORTHO05D007381 6.0e-50 202.2 322 45.7
Glyma.16G168300 Glycine max HOM05D006010 ORTHO05D007381 6.0e-50 202.2 322 47.2
QL12p000853 Quercus lobata HOM05D006010 ORTHO05D007381 7.9e-50 201.8 372 41.9
Ciclev10026000m.g Citrus clementina HOM05D006010 ORTHO05D007381 1.0e-49 201.4 338 45.3
Sed0003139 Sechium edule HOM05D006010 ORTHO05D007381 1.3e-49 201.1 323 45.2
Nn3g17023 Nelumbo nucifera HOM05D006010 ORTHO05D007381 1.8e-49 200.7 349 43.8
Phvul.004G098200 Phaseolus vulgaris HOM05D006010 ORTHO05D007381 3.9e-49 199.5 329 45.9
Lsat_1_v5_gn_3_65880 Lactuca sativa HOM05D006010 ORTHO05D007381 1.5e-48 197.6 320 45.9
Eucgr.F02881 Eucalyptus grandis HOM05D006010 ORTHO05D007381 1.9e-48 197.2 283 48.8
vmacro20589 Vaccinium macrocarpon HOM05D006010 ORTHO05D007381 3.3e-48 196.4 306 47.1
HanXRQChr15g0482991 Helianthus annuus HOM05D006010 ORTHO05D007381 4.3e-48 196.1 292 48.3
ECA236G4224 Erigeron canadensis HOM05D006010 ORTHO05D007381 5.6e-48 195.7 323 44.6
AUR62016215 Chenopodium quinoa HOM05D006010 ORTHO05D007381 1.6e-47 194.1 330 44.8
Sabra17G0114300 Salix brachista HOM05D006010 ORTHO05D007381 1.6e-47 194.1 343 43.7
AUR62039273 Chenopodium quinoa HOM05D006010 ORTHO05D007381 2.8e-47 193.4 291 45.7
CsaV3_2G017210 Cucumis sativus L. HOM05D006010 ORTHO05D007381 2.8e-47 193.4 325 41.5
VMungo0464G0699 Vigna mungo HOM05D006010 ORTHO05D007381 4.8e-47 192.6 306 46.1
FAN19G0427 Fragaria x ananassa HOM05D006010 ORTHO05D007381 6.2e-47 192.2 320 44.1
RcHm_v2.0_Chr3g0492111 Rosa chinensis HOM05D006010 ORTHO05D007381 6.2e-47 192.2 322 42.9
Sabra17G0111300 Salix brachista HOM05D006010 ORTHO05D007381 6.2e-47 192.2 343 43.4
FvH4_1g30030 Fragaria vesca HOM05D006010 ORTHO05D007381 8.1e-47 191.8 320 43.8
MELO3C020924.2 Cucumis melo HOM05D006010 ORTHO05D007381 1.1e-46 191.4 324 44.8
FAN28G1345 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.1e-46 191.4 320 44.4
Sc22g0001300 Simmondsia chinensis HOM05D006010 ORTHO05D007381 1.8e-46 190.7 263 51.0
GSVIVG01015997001 Vitis vinifera HOM05D006010 ORTHO05D007381 1.8e-46 190.7 393 39.2
CANSAT01G2297 Cannabis sativa HOM05D006010 ORTHO05D007381 2.4e-46 190.3 353 40.5
FAN28G0351 Fragaria x ananassa HOM05D006010 ORTHO05D007381 2.4e-46 190.3 333 42.9
Hund11982 Selenicereus undatus HOM05D006010 ORTHO05D007381 5.3e-46 189.1 339 43.4
DCAR_014157 Daucus carota HOM05D006010 ORTHO05D007381 6.9e-46 188.7 323 46.7
TPR.G23647 Trifolium pratense HOM05D006010 ORTHO05D007381 9.0e-46 188.3 311 44.7
Actinidia28796 Actinidia chinensis HOM05D006010 ORTHO05D007381 1.3e-44 184.5 302 42.7
FAN23G2851 Fragaria x ananassa HOM05D006010 ORTHO05D007381 3.8e-44 183.0 327 45.0
Duzib235G0102 Durio zibethinus HOM05D006010 ORTHO05D007381 2.5e-43 180.3 331 42.9
ClCG05G010670 Citrullus lanatus HOM05D006010 ORTHO05D007381 9.3e-43 178.3 322 42.2
TAR623G0083 Trochodendron aralioides HOM05D006010 ORTHO05D007381 9.3e-43 178.3 358 41.6
THA.LOC104827184 Tarenaya hassleriana HOM05D006010 ORTHO05D007381 2.5e-40 170.2 359 40.4
Lj2A517G41 Lonicera japonica HOM05D006010 ORTHO05D007381 1.1e-38 164.9 226 50.0
Ah.05g176710 Amaranthus hybridus HOM05D006010 ORTHO05D007381 6.9e-38 162.2 310 42.3
Sp3g01890 Schrenkiella parvula HOM05D006010 ORTHO05D007381 4.5e-37 159.5 284 43.3
C09p75990 Brassica napus HOM05D006010 ORTHO05D007381 1.0e-36 158.3 247 46.2
BolC5t35058H Brassica oleracea HOM05D006010 ORTHO05D007381 1.0e-36 158.3 247 46.2
GSVIVG01015998001 Vitis vinifera HOM05D006010 ORTHO05D007381 1.0e-36 158.3 280 44.3
Thecc.06G019600 Theobroma cacao HOM05D006010 ORTHO05D007381 8.5e-36 155.2 360 37.2
MD07G1042200 Malus domestica HOM05D006010 ORTHO05D007381 1.9e-35 154.1 321 39.6
AT3G02860 Arabidopsis thaliana HOM05D006010 ORTHO05D007381 3.2e-35 153.3 249 45.4
A05p44250 Brassica napus HOM05D006010 ORTHO05D007381 9.3e-35 151.8 247 45.3
BraA06t23281Z Brassica rapa HOM05D000919 ORTHO05D004442 9.3e-35 151.8 247 45.3
CDE09G0547 Ceratophyllum demersum HOM05D006010 ORTHO05D007381 9.3e-35 151.8 373 35.9
AL3G12280 Arabidopsis lyrata HOM05D006010 ORTHO05D007381 1.2e-34 151.4 252 43.7
Sed0026765 Sechium edule HOM05D006010 ORTHO05D007381 2.1e-34 150.6 316 40.2
Thhalv10021193m.g Eutrema salsugineum HOM05D006010 ORTHO05D007381 2.7e-34 150.2 243 44.0
Aa31LG5G13330 Aethionema arabicum HOM05D006010 ORTHO05D007381 1.8e-33 147.5 284 39.4
PSO478G0898 Papaver somniferum HOM05D006010 ORTHO05D007381 3.0e-33 146.7 282 38.3
PSO017G1892 Papaver somniferum HOM05D006010 ORTHO05D007381 1.5e-32 144.4 283 37.5
Zm00001eb291600 Zea mays HOM05D006010 ORTHO05D007381 3.3e-32 143.3 370 37.6
Carub.0003s0196 Capsella rubella HOM05D006010 ORTHO05D007381 5.7e-32 142.5 244 42.2
CARHR076870 Cardamine hirsuta HOM05D006010 ORTHO05D007381 7.4e-32 142.1 244 41.8
Os05g0495100 Oryza sativa ssp. japonica HOM05D006010 ORTHO05D007381 2.2e-31 140.6 384 36.7
BcaC05g30500 Brassica carinata HOM05D000919 ORTHO05D004442 3.1e-30 136.7 283 38.2
TPR.G23699 Trifolium pratense HOM05D005584 ORTHO05D006809 5.3e-30 136.0 204 46.6
FAN26G2228 Fragaria x ananassa HOM05D006010 ORTHO05D007381 6.9e-30 135.6 283 40.3
COL.COLO4_31121 Corchorus olitorius HOM05D006010 ORTHO05D007381 3.4e-29 133.3 402 32.8
Mapoly0044s0136 Marchantia polymorpha HOM05D006010 ORTHO05D007381 3.4e-29 133.3 256 37.5
CSS0039891 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 4.5e-29 132.9 128 60.2
GSVIVG01016007001 Vitis vinifera HOM05D006010 ORTHO05D007381 2.2e-28 130.6 282 42.9
Gohir.A10G157800 Gossypium hirsutum HOM05D006010 ORTHO05D007381 8.5e-28 128.6 368 33.2
TWI74G0222 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 8.5e-28 128.6 264 39.4
Gorai.011G090700 Gossypium raimondii HOM05D006010 ORTHO05D007381 2.5e-27 127.1 362 33.4
Gohir.D10G083400 Gossypium hirsutum HOM05D006010 ORTHO05D007381 2.7e-26 123.6 362 33.1
AagrBONN_evm.TU.Sc2ySwM_369.381 Anthoceros agrestis HOM05D006010 ORTHO05D007381 6.1e-26 122.5 257 39.7
SEGI_17538 Sequoiadendron giganteum HOM05D006010 ORTHO05D007381 7.9e-26 122.1 260 36.9
Manes.07G077600 Manihot esculenta HOM05D006010 ORTHO05D007381 1.1e-24 118.2 255 40.8
GSVIVG01016005001 Vitis vinifera HOM05D006010 ORTHO05D007381 3.3e-24 116.7 134 55.2
Ca_05839_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 7.4e-24 115.5 125 56.8
Ca_05837_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 8.5e-20 102.1 200 45.0
FAN25G0538 Fragaria x ananassa HOM05D006010 ORTHO05D007381 7.9e-18 95.5 147 45.6
Sed0018686 Sechium edule HOM05D006010 ORTHO05D007381 4.4e-16 89.7 56 75.0
Sed0023512 Sechium edule HOM05D006010 ORTHO05D007381 5.7e-16 89.4 54 77.8
ATR0320G006 Amborella trichopoda HOM05D006010 ORTHO05D007381 9.7e-16 88.6 187 38.0
ATR0320G008 Amborella trichopoda HOM05D006010 ORTHO05D007381 9.7e-16 88.6 124 44.4
Aqoxy3G00232 Aquilegia oxysepala HOM05D006010 ORTHO05D007381 1.8e-14 84.3 85 60.0
GSVIVG01016036001 Vitis vinifera HOM05D006010 ORTHO05D007381 2.4e-14 84.0 57 68.4
SHI30126 Sapria himalayana HOM05D006010 ORTHO05D007381 2.6e-13 80.5 93 50.5
SHI30124 Sapria himalayana HOM05D006010 ORTHO05D007381 1.5e-11 74.7 125 38.4
Pp3c12_7630 Physcomitrium patens HOM05D006010 ORTHO05D007381 4.7e-10 69.7 209 33.0
Nitab4.5_0011135g0050 Nicotiana tabacum HOM05D006010 ORTHO05D007381 4.4e-08 63.2 128 39.8
Lj2A517G40 Lonicera japonica HOM05D006010 ORTHO05D007381 5.7e-08 62.8 100 44.0
CSS0015748 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 1.8e-06 57.8 91 46.2
CSS0044039 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 1.8e-06 57.8 91 46.2
CSS0001849 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 2.4e-06 57.4 100 45.0
CSS0044569 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 2.4e-06 57.4 100 45.0
Glyma.14G212900 Glycine max HOM05D026408 ORTHO05D029776 7.0e-06 55.8 130 36.9


User provided reference genes

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