Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold110G31323 Striga asiatica HOM05D001433 ORTHO05D011977 4.5e-112 407.9 200 100.0
SGA_v2.0_scaffold192G40562 Striga asiatica HOM05D001433 ORTHO05D005019 2.2e-50 203.0 235 53.6
SalBow4G0367 Salvia bowleyana HOM05D001433 ORTHO05D005019 1.7e-42 176.8 236 47.5
SalBow4G2448 Salvia bowleyana HOM05D001433 ORTHO05D005019 4.9e-42 175.3 192 54.2
Migut.F00228 Erythranthe guttata HOM05D001433 ORTHO05D005019 9.2e-41 171.0 186 53.8
Dinv29294 Davidia involucrata HOM05D001433 ORTHO05D005019 1.7e-39 166.8 164 56.1
MBI07_g07096_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D005019 2.3e-39 166.4 110 74.5
CSS0007758 Camellia sinensis var. sinensis HOM05D001433 ORTHO05D005019 2.9e-39 166.0 166 54.8
MBI06_g08464_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D005019 2.9e-39 166.0 115 71.3
QL09p009601 Quercus lobata HOM05D001433 ORTHO05D005019 5.0e-39 165.2 167 56.9
TAR375G0916 Trochodendron aralioides HOM05D001433 ORTHO05D005019 5.0e-39 165.2 166 55.4
TAR375G0942 Trochodendron aralioides HOM05D001433 ORTHO05D005019 5.0e-39 165.2 166 55.4
Solyc03g083440.4 Solanum lycopersicum HOM05D001433 ORTHO05D005019 6.6e-39 164.9 169 54.4
GSVIVG01038714001 Vitis vinifera HOM05D001433 ORTHO05D005019 8.6e-39 164.5 166 56.0
Oeu041320.1 Olea europaea HOM05D001433 ORTHO05D005019 1.1e-38 164.1 169 55.0
HanXRQChr09g0253001 Helianthus annuus HOM05D001433 ORTHO05D005019 1.5e-38 163.7 164 55.5
Hund11674 Selenicereus undatus HOM05D001433 ORTHO05D005019 1.5e-38 163.7 166 55.4
Sopen03g023210 Solanum pennellii HOM05D001433 ORTHO05D005019 1.5e-38 163.7 169 54.4
Hma1.2p1_0538F.1_g174380 Hydrangea macrophylla HOM05D001433 ORTHO05D005019 2.5e-38 162.9 169 54.4
Ciclev10004120m.g Citrus clementina HOM05D001433 ORTHO05D005019 3.3e-38 162.5 164 54.9
Actinidia08638 Actinidia chinensis HOM05D001433 ORTHO05D005019 4.3e-38 162.2 166 53.6
Lsat_1_v5_gn_9_58201 Lactuca sativa HOM05D001433 ORTHO05D005019 5.6e-38 161.8 164 54.9
Oeu041044.1 Olea europaea HOM05D001433 ORTHO05D005019 7.3e-38 161.4 120 69.2
ClCG05G008840 Citrullus lanatus HOM05D001433 ORTHO05D005019 9.5e-38 161.0 168 53.6
Gohir.D12G251500 Gossypium hirsutum HOM05D001433 ORTHO05D005019 9.5e-38 161.0 164 54.9
Gorai.008G269600 Gossypium raimondii HOM05D001433 ORTHO05D005019 9.5e-38 161.0 164 54.9
Nitab4.5_0000714g0070 Nicotiana tabacum HOM05D001433 ORTHO05D005019 9.5e-38 161.0 169 53.3
Nitab4.5_0002492g0040 Nicotiana tabacum HOM05D001433 ORTHO05D005019 9.5e-38 161.0 169 53.3
Sabra15G0013400 Salix brachista HOM05D001433 ORTHO05D005019 9.5e-38 161.0 118 71.2
HanXRQChr15g0493171 Helianthus annuus HOM05D001433 ORTHO05D005019 1.6e-37 160.2 164 53.7
CAN.G108.62 Capsicum annuum HOM05D001433 ORTHO05D005019 2.1e-37 159.8 120 67.5
Duzib068G1332 Durio zibethinus HOM05D001433 ORTHO05D005019 2.1e-37 159.8 164 53.7
Nn1g01871 Nelumbo nucifera HOM05D001433 ORTHO05D005019 2.1e-37 159.8 120 67.5
vmacro10115 Vaccinium macrocarpon HOM05D001433 ORTHO05D005019 2.1e-37 159.8 166 53.6
Duzib084G0325 Durio zibethinus HOM05D001433 ORTHO05D005019 2.8e-37 159.5 118 68.6
Manes.14G006836 Manihot esculenta HOM05D001433 ORTHO05D005019 2.8e-37 159.5 164 54.3
Potri.015G017500 Populus trichocarpa HOM05D001433 ORTHO05D005019 2.8e-37 159.5 118 70.3
Sed0021586 Sechium edule HOM05D001433 ORTHO05D005019 2.8e-37 159.5 164 53.7
Prupe.2G311700 Prunus persica HOM05D001433 ORTHO05D005019 4.7e-37 158.7 164 54.3
THA.LOC104811925 Tarenaya hassleriana HOM05D001433 ORTHO05D005019 4.7e-37 158.7 191 49.7
Aa31LG3G9620 Aethionema arabicum HOM05D001433 ORTHO05D005019 6.1e-37 158.3 112 69.6
Rhsim03G0207200 Rhododendron simsii HOM05D001433 ORTHO05D005019 6.1e-37 158.3 166 53.0
CiPaw.06G009900 Carya illinoinensis HOM05D001433 ORTHO05D005019 8.0e-37 157.9 121 66.9
Hund04854 Selenicereus undatus HOM05D001433 ORTHO05D005019 8.0e-37 157.9 166 53.0
FAN01G1716 Fragaria x ananassa HOM05D001433 ORTHO05D005019 1.0e-36 157.5 164 53.7
MD07G1290500 Malus domestica HOM05D001433 ORTHO05D005019 1.4e-36 157.1 118 68.6
Actinidia34209 Actinidia chinensis HOM05D001433 ORTHO05D005019 2.3e-36 156.4 120 66.7
ECA232G2377 Erigeron canadensis HOM05D001433 ORTHO05D005019 2.3e-36 156.4 164 53.0
unitig_748.g8525 Utricularia gibba HOM05D001433 ORTHO05D005019 2.3e-36 156.4 143 59.4
Atru.chr1.150 Acer truncatum HOM05D001433 ORTHO05D005019 3.0e-36 156.0 188 48.9
EL10Ac3g05303 Beta vulgaris HOM05D001433 ORTHO05D005019 3.0e-36 156.0 166 53.0
Nn3g19010 Nelumbo nucifera HOM05D001433 ORTHO05D005019 3.0e-36 156.0 166 53.6
Eucgr.A01471 Eucalyptus grandis HOM05D001433 ORTHO05D005019 4.0e-36 155.6 164 53.0
TAR629G0032 Trochodendron aralioides HOM05D001433 ORTHO05D005019 4.0e-36 155.6 172 51.2
Ah.07g205860 Amaranthus hybridus HOM05D001433 ORTHO05D005019 5.2e-36 155.2 120 66.7
Cpa.g.sc3.65 Carica papaya HOM05D001433 ORTHO05D005019 5.2e-36 155.2 264 39.8
CiPaw.05G252100 Carya illinoinensis HOM05D001433 ORTHO05D005019 5.2e-36 155.2 118 67.8
Cc02_g01700 Coffea canephora HOM05D001433 ORTHO05D005019 5.2e-36 155.2 120 65.8
CsaV3_3G027930 Cucumis sativus L. HOM05D001433 ORTHO05D005019 5.2e-36 155.2 164 53.0
CSS0050330 Camellia sinensis var. sinensis HOM05D001433 ORTHO05D005019 6.8e-36 154.8 120 65.8
Duzib205G1094 Durio zibethinus HOM05D001433 ORTHO05D005019 6.8e-36 154.8 118 66.9
Rhsim09G0205100 Rhododendron simsii HOM05D001433 ORTHO05D005019 6.8e-36 154.8 118 66.9
Sc13g0009760 Simmondsia chinensis HOM05D001433 ORTHO05D005019 6.8e-36 154.8 166 52.4
PSO063G5383 Papaver somniferum HOM05D001433 ORTHO05D005019 8.9e-36 154.5 120 66.7
vmacro06546 Vaccinium macrocarpon HOM05D001433 ORTHO05D005019 8.9e-36 154.5 120 66.7
PSO170G0996 Papaver somniferum HOM05D001433 ORTHO05D005019 1.2e-35 154.1 120 66.7
Sed0006803 Sechium edule HOM05D001433 ORTHO05D005019 1.2e-35 154.1 164 53.0
AUR62006114 Chenopodium quinoa HOM05D001433 ORTHO05D005019 1.5e-35 153.7 162 56.8
Sabra12G0018500 Salix brachista HOM05D001433 ORTHO05D005019 1.5e-35 153.7 117 68.4
BcaC01g06255 Brassica carinata HOM05D001433 ORTHO05D005019 2.0e-35 153.3 164 51.8
A03p15140 Brassica napus HOM05D001433 ORTHO05D005019 2.0e-35 153.3 164 51.8
C03p17640 Brassica napus HOM05D001433 ORTHO05D005019 2.0e-35 153.3 164 51.8
BolC3t14177H Brassica oleracea HOM05D001433 ORTHO05D005019 2.0e-35 153.3 164 51.8
BraA03t10809Z Brassica rapa HOM05D001433 ORTHO05D005019 2.0e-35 153.3 164 51.8
MD01G1219500 Malus domestica HOM05D001433 ORTHO05D005019 2.6e-35 152.9 118 67.8
Manes.06G159400 Manihot esculenta HOM05D001433 ORTHO05D005019 2.6e-35 152.9 118 66.9
Potri.012G011700 Populus trichocarpa HOM05D001433 ORTHO05D005019 4.4e-35 152.1 118 67.8
Rhsim03G0207700 Rhododendron simsii HOM05D001433 ORTHO05D005019 4.4e-35 152.1 136 58.1
PGR042G1482 Punica granatum HOM05D001433 ORTHO05D005019 5.8e-35 151.8 164 52.4
TWI23G0733 Tripterygium wilfordii HOM05D001433 ORTHO05D005019 5.8e-35 151.8 120 64.2
CANSAT21G0603 Cannabis sativa HOM05D001433 ORTHO05D005019 7.5e-35 151.4 167 52.7
Sp6g15593 Schrenkiella parvula HOM05D001433 ORTHO05D005019 7.5e-35 151.4 164 51.2
vmacro06543 Vaccinium macrocarpon HOM05D001433 ORTHO05D005019 7.5e-35 151.4 166 51.2
arahy.Tifrunner.gnm1.ann1.A1ZC3A Arachis hypogaea HOM05D001433 ORTHO05D005019 9.8e-35 151.0 160 56.9
arahy.Tifrunner.gnm1.ann1.ZYZ79R Arachis hypogaea HOM05D001433 ORTHO05D005019 9.8e-35 151.0 160 56.9
RcHm_v2.0_Chr1g0381001 Rosa chinensis HOM05D001433 ORTHO05D005019 9.8e-35 151.0 118 66.1
FvH4_7g31770 Fragaria vesca HOM05D001433 ORTHO05D005019 1.3e-34 150.6 118 66.1
FAN03G1831 Fragaria x ananassa HOM05D001433 ORTHO05D005019 1.3e-34 150.6 118 66.1
FAN06G0504 Fragaria x ananassa HOM05D001433 ORTHO05D005019 1.3e-34 150.6 118 66.1
FAN06G0708 Fragaria x ananassa HOM05D001433 ORTHO05D005019 1.3e-34 150.6 118 66.1
FAN10G1144 Fragaria x ananassa HOM05D001433 ORTHO05D005019 1.3e-34 150.6 118 66.1
FAN10G3586 Fragaria x ananassa HOM05D001433 ORTHO05D005019 1.3e-34 150.6 118 66.1
TWI14G0941 Tripterygium wilfordii HOM05D001433 ORTHO05D005019 1.3e-34 150.6 146 55.5
DCAR_020316 Daucus carota HOM05D001433 ORTHO05D005019 1.7e-34 150.2 122 64.8
Gohir.A05G414000 Gossypium hirsutum HOM05D001433 ORTHO05D005019 1.7e-34 150.2 118 63.6
Aqoxy7G00099 Aquilegia oxysepala HOM05D001433 ORTHO05D005019 2.2e-34 149.8 125 63.2
HPP92_008165 Vanilla planifolia HOM05D001433 ORTHO05D005019 4.9e-34 148.7 172 48.3
ATR0602G279 Amborella trichopoda HOM05D001433 ORTHO05D005019 8.3e-34 147.9 164 50.6
Aqoxy5G04232 Aquilegia oxysepala HOM05D001433 ORTHO05D005019 8.3e-34 147.9 138 57.2
Phvul.009G053900 Phaseolus vulgaris HOM05D001433 ORTHO05D005019 8.3e-34 147.9 161 51.6
AL8G28160 Arabidopsis lyrata HOM05D001433 ORTHO05D005019 1.4e-33 147.1 167 50.9
AT5G53460 Arabidopsis thaliana HOM05D001433 ORTHO05D005019 1.8e-33 146.7 171 49.7
VMungo1309G1831 Vigna mungo HOM05D001433 ORTHO05D005019 3.2e-33 146.0 161 51.6
Glyma.06G127400 Glycine max HOM05D001433 ORTHO05D005019 4.1e-33 145.6 161 52.2
DCAR_008916 Daucus carota HOM05D001433 ORTHO05D005019 5.4e-33 145.2 122 61.5
VMungo0647G1305 Vigna mungo HOM05D001433 ORTHO05D005019 9.2e-33 144.4 189 46.0
CDE02G2166 Ceratophyllum demersum HOM05D001433 ORTHO05D005019 1.2e-32 144.1 144 54.9
Glyma.04G236900 Glycine max HOM05D001433 ORTHO05D005019 1.2e-32 144.1 161 51.6
Glyma.14G162300 Glycine max HOM05D001433 ORTHO05D005019 1.6e-32 143.7 187 46.0
SEGI_17472 Sequoiadendron giganteum HOM05D001433 ORTHO05D005019 1.6e-32 143.7 171 49.7
Lj1g0027622 Lotus japonicus HOM05D001433 ORTHO05D005019 2.0e-32 143.3 115 65.2
Peaxi162Scf00550g00052 Petunia axillaris HOM05D001433 ORTHO05D005019 2.7e-32 142.9 169 49.7
Lalb_Chr08g0240351 Lupinus albus HOM05D001433 ORTHO05D005019 3.5e-32 142.5 165 51.5
CDE10G1303 Ceratophyllum demersum HOM05D001433 ORTHO05D005019 4.6e-32 142.1 134 56.0
TPR.G20023 Trifolium pratense HOM05D001433 ORTHO05D005019 4.6e-32 142.1 165 49.7
CDE10G1071 Ceratophyllum demersum HOM05D001433 ORTHO05D005019 6.0e-32 141.7 134 55.2
Glyma.19G065600 Glycine max HOM05D001433 ORTHO05D005019 1.0e-31 141.0 161 50.3
Medtr1g027020 Medicago truncatula HOM05D001433 ORTHO05D005019 1.3e-31 140.6 119 61.3
Phvul.001G076400 Phaseolus vulgaris HOM05D001433 ORTHO05D005019 1.3e-31 140.6 194 44.3
SMO353G0329 Selaginella moellendorffii HOM05D001433 ORTHO05D005019 2.3e-31 139.8 123 60.2
Psat6g037200 Pisum sativum HOM05D001433 ORTHO05D005019 3.9e-31 139.0 165 48.5
SMO302G0048 Selaginella moellendorffii HOM05D001433 ORTHO05D005019 5.0e-31 138.7 123 59.3
SHI02382 Sapria himalayana HOM05D001433 ORTHO05D005019 1.1e-30 137.5 117 62.4
Os05g0555600 Oryza sativa ssp. japonica HOM05D001433 ORTHO05D005019 2.5e-30 136.3 122 56.6
Ca_12725_v3 Cicer arietinum L. HOM05D001433 ORTHO05D005019 7.3e-30 134.8 178 44.4
Lalb_Chr11g0066781 Lupinus albus HOM05D001433 ORTHO05D005019 9.5e-30 134.4 120 61.7
AUR62019375 Chenopodium quinoa HOM05D001433 ORTHO05D005019 8.0e-29 131.3 162 51.9
Zm00001eb295210 Zea mays HOM05D001433 ORTHO05D017478 2.3e-28 129.8 166 42.2
Zm00001eb360480 Zea mays HOM05D001433 ORTHO05D005019 5.2e-28 128.6 120 53.3
CBR_g18711 Chara braunii HOM05D001433 ORTHO05D005019 6.8e-28 128.3 165 41.8
AagrBONN_evm.TU.Sc2ySwM_344.3239 Anthoceros agrestis HOM05D001433 ORTHO05D005019 2.6e-27 126.3 167 43.1
Lj3C907T3 Lonicera japonica HOM05D001433 ORTHO05D005019 2.6e-27 126.3 167 47.3
Mapoly0002s0330 Marchantia polymorpha HOM05D001433 ORTHO05D005019 4.4e-27 125.6 119 56.3
Pp3c5_20080 Physcomitrium patens HOM05D001433 ORTHO05D005019 7.5e-27 124.8 165 46.7
Pp3c14_8740 Physcomitrium patens HOM05D001433 ORTHO05D005019 9.8e-27 124.4 165 44.2
Os01g0681900 Oryza sativa ssp. japonica HOM05D001433 ORTHO05D005019 1.7e-26 123.6 118 55.1
Zm00001eb021930 Zea mays HOM05D001433 ORTHO05D021021 2.9e-26 122.9 166 42.8
Pp3c10_8200 Physcomitrium patens HOM05D001433 ORTHO05D005019 1.4e-25 120.6 159 43.4
CBR_g18718 Chara braunii HOM05D001433 ORTHO05D005019 1.6e-24 117.1 165 38.8
MELO3C008481.2 Cucumis melo HOM05D001433 ORTHO05D005019 1.6e-24 117.1 154 46.1
arahy.Tifrunner.gnm1.ann1.HI2JIU Arachis hypogaea HOM05D001433 ORTHO05D005019 5.0e-23 112.1 63 81.0
Pp3c16_19110 Physcomitrium patens HOM05D001433 ORTHO05D005019 1.9e-22 110.2 133 46.6
CBR_g31844 Chara braunii HOM05D001433 ORTHO05D005019 5.6e-22 108.6 114 46.5
MCO07G759 Micromonas commoda HOM05D001433 ORTHO05D005019 1.6e-21 107.1 108 50.0
Lj1A1014G37 Lonicera japonica HOM05D001433 ORTHO05D005019 4.4e-19 99.0 142 44.4
SGA_v2.0_scaffold279G46778 Striga asiatica HOM05D001433 ORTHO05D021021 3.7e-18 95.9 106 53.8
Cre13.g592200 Chlamydomonas reinhardtii HOM05D001433 ORTHO05D005019 1.9e-17 93.6 95 49.5
Haze_00186 Corylus avellana HOM05D001433 ORTHO05D005019 2.4e-17 93.2 137 43.1
Dinv35322 Davidia involucrata HOM05D001433 ORTHO05D005019 1.6e-16 90.5 124 43.5
Carub.0008s1362 Capsella rubella HOM05D001433 ORTHO05D005019 2.1e-16 90.1 50 82.0
CARHR266580 Cardamine hirsuta HOM05D001433 ORTHO05D005019 2.1e-16 90.1 50 82.0
Thecc.03G195800 Theobroma cacao HOM05D001433 ORTHO05D005019 4.6e-16 89.0 50 84.0
Thhalv10012414m.g Eutrema salsugineum HOM05D001433 ORTHO05D005019 1.0e-15 87.8 50 80.0
Gohir.A12G250700 Gossypium hirsutum HOM05D001433 ORTHO05D005019 1.0e-15 87.8 50 82.0
SMO302G0002 Selaginella moellendorffii HOM05D001433 ORTHO05D005019 2.3e-15 86.7 49 79.6
Nn1g04256 Nelumbo nucifera HOM05D001433 ORTHO05D011977 2.5e-14 83.2 50 80.0
Zm00001eb156610 Zea mays HOM05D001433 ORTHO05D005019 3.3e-14 82.8 49 77.6
BcaB02g10704 Brassica carinata HOM05D001433 ORTHO05D011977 9.5e-14 81.3 50 76.0
Haze_26266 Corylus avellana HOM05D001433 ORTHO05D005019 2.2e-10 70.1 131 32.1
Pp3c7_6520 Physcomitrium patens HOM05D001433 ORTHO05D005172 3.8e-10 69.3 144 34.0
CDE08G1206 Ceratophyllum demersum HOM05D001433 ORTHO05D011977 1.4e-09 67.4 43 74.4
Nn1g05906 Nelumbo nucifera HOM05D001433 ORTHO05D011977 6.6e-07 58.5 33 78.8
MCO12G340 Micromonas commoda HOM05D001433 ORTHO05D005172 1.1e-06 57.8 91 33.0
Pp3c8_17940 Physcomitrium patens HOM05D001433 ORTHO05D005172 2.5e-06 56.6 88 33.0
Ah.13g076880 Amaranthus hybridus HOM05D001433 ORTHO05D005172 3.3e-06 56.2 170 28.2
Hund19100 Selenicereus undatus HOM05D001433 ORTHO05D005172 5.6e-06 55.5 105 29.5


User provided reference genes

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