Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold100G29640 Striga asiatica HOM05D003743 ORTHO05D004311 0.0e+00 1090.1 622 100.0
Oeu050830.1 Olea europaea HOM05D003743 ORTHO05D004311 3.4e-227 792.0 630 71.9
Migut.M01180 Erythranthe guttata HOM05D003743 ORTHO05D004311 1.9e-225 786.2 635 71.5
SalBow8G3648 Salvia bowleyana HOM05D003743 ORTHO05D004311 1.5e-211 740.0 637 67.0
unitig_748.g8020 Utricularia gibba HOM05D003743 ORTHO05D004311 2.4e-204 716.1 631 65.9
Dinv07531 Davidia involucrata HOM05D003743 ORTHO05D004311 3.9e-199 698.7 657 62.1
Hma1.2p1_0126F.1_g059170 Hydrangea macrophylla HOM05D003743 ORTHO05D004311 3.1e-196 689.1 653 63.7
Glyma.07G194200 Glycine max HOM05D003743 ORTHO05D004311 5.0e-194 681.8 657 60.9
VMungo0251G3484 Vigna mungo HOM05D003743 ORTHO05D004311 7.2e-193 677.9 658 61.1
Glyma.13G182500 Glycine max HOM05D003743 ORTHO05D004311 9.4e-193 677.6 657 59.8
Phvul.002G226300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 1.6e-192 676.8 655 60.9
CSS0028072 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 2.3e-191 672.9 634 63.9
Eucgr.E03353 Eucalyptus grandis HOM05D003743 ORTHO05D004311 2.3e-191 672.9 658 61.1
Manes.16G024900 Manihot esculenta HOM05D003743 ORTHO05D004311 3.0e-191 672.5 664 61.6
MD10G1061800 Malus domestica HOM05D003743 ORTHO05D004311 8.8e-191 671.0 658 58.8
Lsat_1_v5_gn_2_40361 Lactuca sativa HOM05D003743 ORTHO05D004311 1.3e-189 667.2 646 60.5
Prupe.3G050300 Prunus persica HOM05D003743 ORTHO05D004311 2.8e-189 666.0 657 59.1
Thecc.06G191600 Theobroma cacao HOM05D003743 ORTHO05D004311 2.8e-189 666.0 661 59.3
Psat7g112160 Pisum sativum HOM05D003743 ORTHO05D004311 1.8e-188 663.3 656 59.8
FAN16G2290 Fragaria x ananassa HOM05D003743 ORTHO05D004311 5.3e-188 661.8 658 59.3
CiPaw.10G046600 Carya illinoinensis HOM05D003743 ORTHO05D004311 1.5e-187 660.2 659 58.7
FAN14G3620 Fragaria x ananassa HOM05D003743 ORTHO05D004311 2.6e-187 659.4 658 59.6
CsaV3_4G005020 Cucumis sativus L. HOM05D003743 ORTHO05D004311 7.7e-187 657.9 663 58.5
Medtr4g089070 Medicago truncatula HOM05D003743 ORTHO05D004311 1.7e-186 656.8 663 59.0
RcHm_v2.0_Chr5g0007801 Rosa chinensis HOM05D003743 ORTHO05D004311 1.7e-186 656.8 659 58.7
Duzib160G0164 Durio zibethinus HOM05D003743 ORTHO05D004311 3.8e-186 655.6 659 59.0
Ca_25733_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 8.5e-186 654.4 659 60.1
FAN21G0113 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.1e-185 654.1 658 59.3
Haze_06507 Corylus avellana HOM05D003743 ORTHO05D004311 3.2e-185 652.5 660 58.0
Nitab4.5_0003668g0110 Nicotiana tabacum HOM05D003743 ORTHO05D004311 9.4e-185 651.0 656 61.1
Gorai.011G025800 Gossypium raimondii HOM05D003743 ORTHO05D004311 2.1e-184 649.8 661 59.8
FvH4_3g04783 Fragaria vesca HOM05D003743 ORTHO05D004311 3.6e-184 649.0 658 59.0
Gohir.D10G024500 Gossypium hirsutum HOM05D003743 ORTHO05D004311 4.7e-184 648.7 662 59.8
Duzib235G1026 Durio zibethinus HOM05D003743 ORTHO05D004311 1.0e-183 647.5 661 59.0
Gohir.A10G023800 Gossypium hirsutum HOM05D003743 ORTHO05D004311 1.0e-183 647.5 662 59.7
COL.COLO4_31510 Corchorus olitorius HOM05D003743 ORTHO05D004311 1.4e-183 647.1 657 60.4
Sed0012938 Sechium edule HOM05D003743 ORTHO05D004311 3.0e-183 646.0 657 58.1
FAN03G0627 Fragaria x ananassa HOM05D003743 ORTHO05D004311 2.6e-182 642.9 658 58.5
PGR042G1300 Punica granatum HOM05D003743 ORTHO05D004311 3.3e-182 642.5 666 58.7
MELO3C017564.2 Cucumis melo HOM05D003743 ORTHO05D004311 1.3e-181 640.6 663 57.2
TPR.G12063 Trifolium pratense HOM05D003743 ORTHO05D004311 6.3e-181 638.3 658 59.3
CSS0027200 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 8.2e-181 637.9 637 58.1
Potri.004G039500 Populus trichocarpa HOM05D003743 ORTHO05D004311 1.1e-180 637.5 666 56.6
Solyc02g078580.1 Solanum lycopersicum HOM05D003743 ORTHO05D004311 1.1e-180 637.5 650 62.9
Cpa.g.sc27.76 Carica papaya HOM05D003743 ORTHO05D004311 1.4e-180 637.1 667 57.6
Sopen02g023440 Solanum pennellii HOM05D003743 ORTHO05D004311 1.4e-180 637.1 650 62.8
Peaxi162Scf00379g00092 Petunia axillaris HOM05D003743 ORTHO05D004311 4.1e-180 635.6 653 60.0
Lalb_Chr05g0218341 Lupinus albus HOM05D003743 ORTHO05D004311 9.1e-180 634.4 655 58.8
Nitab4.5_0003347g0010 Nicotiana tabacum HOM05D003743 ORTHO05D004311 9.1e-180 634.4 656 59.6
arahy.Tifrunner.gnm1.ann1.I4CLDN Arachis hypogaea HOM05D003743 ORTHO05D004311 1.2e-179 634.0 651 57.5
PGSC0003DMG400022434 Solanum tuberosum HOM05D003743 ORTHO05D004311 1.6e-179 633.6 655 61.8
TAR627G0572 Trochodendron aralioides HOM05D003743 ORTHO05D004311 2.0e-179 633.3 667 58.2
THA.LOC104819165 Tarenaya hassleriana HOM05D003743 ORTHO05D004311 4.5e-179 632.1 652 57.2
Cc02_g12930 Coffea canephora HOM05D003743 ORTHO05D004311 1.0e-178 630.9 653 58.5
Potri.011G047900 Populus trichocarpa HOM05D003743 ORTHO05D004311 3.8e-178 629.0 665 57.9
Sabra11G0033300 Salix brachista HOM05D003743 ORTHO05D004311 5.5e-177 625.2 658 55.5
RhsimUnG0044100 Rhododendron simsii HOM05D003743 ORTHO05D004311 4.7e-176 622.1 665 59.4
CAN.G1627.16 Capsicum annuum HOM05D003743 ORTHO05D004311 6.1e-176 621.7 659 59.9
TWI23G0181 Tripterygium wilfordii HOM05D003743 ORTHO05D004311 6.1e-176 621.7 660 56.7
Ciclev10028000m.g Citrus clementina HOM05D003743 ORTHO05D004311 1.0e-175 620.9 654 57.5
HanXRQChr10g0285841 Helianthus annuus HOM05D003743 ORTHO05D004311 1.4e-175 620.5 643 58.0
QL05p039342 Quercus lobata HOM05D003743 ORTHO05D004311 6.7e-175 618.2 659 55.8
QL10p057179 Quercus lobata HOM05D003743 ORTHO05D004311 6.7e-175 618.2 659 55.8
Rhsim07G0025200 Rhododendron simsii HOM05D003743 ORTHO05D004311 5.7e-174 615.1 665 58.9
Lj4g0023106 Lotus japonicus HOM05D003743 ORTHO05D004311 3.7e-173 612.5 663 57.3
Sabra04G0024300 Salix brachista HOM05D003743 ORTHO05D004311 4.8e-173 612.1 661 54.6
DCAR_008049 Daucus carota HOM05D003743 ORTHO05D004311 6.3e-173 611.7 659 57.7
RcHm_v2.0_Chr3g0457571 Rosa chinensis HOM05D003743 ORTHO05D004311 1.8e-172 610.1 657 54.9
Aqoxy1G03805 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 1.6e-171 607.1 651 57.8
Aa31LG2G9550 Aethionema arabicum HOM05D003743 ORTHO05D004311 3.5e-171 605.9 650 55.5
ATR0763G146 Amborella trichopoda HOM05D003743 ORTHO05D004311 1.0e-170 604.4 642 56.9
TAR629G2996 Trochodendron aralioides HOM05D003743 ORTHO05D004311 1.7e-170 603.6 664 55.9
PSO170G2796 Papaver somniferum HOM05D003743 ORTHO05D004311 6.5e-170 601.7 652 58.0
Thhalv10023338m.g Eutrema salsugineum HOM05D003743 ORTHO05D004311 1.5e-169 600.5 649 55.0
QL03p016879 Quercus lobata HOM05D003743 ORTHO05D004311 3.2e-169 599.4 657 54.8
FvH4_6g07870 Fragaria vesca HOM05D003743 ORTHO05D004311 4.2e-169 599.0 657 53.7
DCAR_004097 Daucus carota HOM05D003743 ORTHO05D004311 7.2e-169 598.2 656 56.4
Prupe.6G309900 Prunus persica HOM05D003743 ORTHO05D004311 9.4e-169 597.8 648 54.6
Glyma.19G170200 Glycine max HOM05D003743 ORTHO05D004311 1.2e-168 597.4 657 57.1
Carub.0002s0416 Capsella rubella HOM05D003743 ORTHO05D004311 3.6e-168 595.9 648 54.9
FAN14G1138 Fragaria x ananassa HOM05D003743 ORTHO05D004311 3.6e-168 595.9 657 53.6
ECA240G0220 Erigeron canadensis HOM05D003743 ORTHO05D004311 3.0e-167 592.8 657 55.3
PSO210G5871 Papaver somniferum HOM05D003743 ORTHO05D004311 1.2e-166 590.9 652 56.7
FAN05G4405 Fragaria x ananassa HOM05D003743 ORTHO05D004311 5.7e-166 588.6 657 53.0
FAN09G3903 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.3e-165 587.4 657 52.8
Sp2g03480 Schrenkiella parvula HOM05D003743 ORTHO05D004311 6.3e-165 585.1 649 54.1
CANSAT35G0257 Cannabis sativa HOM05D003743 ORTHO05D004311 1.1e-164 584.3 672 54.0
BcaC06g31829 Brassica carinata HOM05D003743 ORTHO05D004311 1.8e-164 583.6 653 53.3
Glyma.03G168800 Glycine max HOM05D003743 ORTHO05D004311 4.1e-164 582.4 654 55.2
AL2G15400 Arabidopsis lyrata HOM05D003743 ORTHO05D004311 7.0e-164 581.6 650 54.6
Lj8P171T25 Lonicera japonica HOM05D003743 ORTHO05D004311 2.7e-163 579.7 523 63.3
Sc05g0007850 Simmondsia chinensis HOM05D003743 ORTHO05D004311 3.5e-163 579.3 649 56.5
AT1G61040 Arabidopsis thaliana HOM05D003743 ORTHO05D004311 4.5e-163 578.9 650 54.3
MBI04_g36401_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 4.5e-163 578.9 653 56.2
CARHR052180 Cardamine hirsuta HOM05D003743 ORTHO05D004311 1.0e-162 577.8 648 54.0
FAN02G2028 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.3e-162 577.4 642 53.4
C01p37700 Brassica napus HOM05D003743 ORTHO05D004311 2.3e-162 576.6 651 53.6
BcaC09g49339 Brassica carinata HOM05D003743 ORTHO05D004311 2.8e-160 569.7 645 53.3
Lj1g0019037 Lotus japonicus HOM05D003743 ORTHO05D004311 3.6e-160 569.3 651 56.7
Ah.09g235750 Amaranthus hybridus HOM05D003743 ORTHO05D004311 6.1e-160 568.5 650 53.7
SHI01836 Sapria himalayana HOM05D003743 ORTHO05D004311 8.0e-160 568.2 661 52.6
Nn1g07800 Nelumbo nucifera HOM05D003743 ORTHO05D004311 1.4e-159 567.4 665 54.3
HPP92_024423 Vanilla planifolia HOM05D003743 ORTHO05D004311 1.4e-159 567.4 665 52.8
Atru.chr7.2377 Acer truncatum HOM05D003743 ORTHO05D004311 2.3e-159 566.6 660 55.0
CDE02G2043 Ceratophyllum demersum HOM05D003743 ORTHO05D004311 1.2e-158 564.3 645 54.7
EL10Ac8g20336 Beta vulgaris HOM05D003743 ORTHO05D004311 6.3e-157 558.5 651 53.1
Phvul.001G167200 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 4.1e-156 555.8 659 53.1
BcaC02g10594 Brassica carinata HOM05D003743 ORTHO05D004311 5.4e-156 555.4 651 51.5
C04p25600 Brassica napus HOM05D003743 ORTHO05D004311 5.4e-156 555.4 651 51.5
DCAR_004099 Daucus carota HOM05D003743 ORTHO05D004311 5.4e-156 555.4 655 54.2
Psat3g052160 Pisum sativum HOM05D003743 ORTHO05D004311 5.4e-156 555.4 646 55.1
Ah.04g152550 Amaranthus hybridus HOM05D003743 ORTHO05D004311 3.5e-155 552.7 656 52.1
A01p29850 Brassica napus HOM05D003743 ORTHO05D004311 4.5e-155 552.4 648 52.6
Ca_08759_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 2.9e-154 549.7 543 58.0
Ca_30219_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 2.9e-154 549.7 543 58.0
CANSAT54G1490 Cannabis sativa HOM05D003743 ORTHO05D004311 1.5e-153 547.4 637 53.7
Lalb_Chr16g0383591 Lupinus albus HOM05D003743 ORTHO05D004311 9.5e-153 544.7 650 54.0
BcaB04g20309 Brassica carinata HOM05D003743 ORTHO05D004311 6.1e-152 542.0 652 49.7
MBI16_g34925_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 1.0e-151 541.2 654 54.9
FAN25G1603 Fragaria x ananassa HOM05D003743 ORTHO05D004311 2.3e-151 540.0 615 54.3
AUR62016972 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.3e-149 534.3 669 51.6
Phvul.001G224300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 4.9e-149 532.3 661 49.0
VMungo1383G3375 Vigna mungo HOM05D003743 ORTHO05D004311 1.1e-148 531.2 654 52.4
VMungo1383G2741 Vigna mungo HOM05D003743 ORTHO05D004311 2.4e-148 530.0 662 49.4
BraA01t03113Z Brassica rapa HOM05D003743 ORTHO05D004311 5.4e-148 528.9 650 50.8
MD04G1191400 Malus domestica HOM05D003743 ORTHO05D004311 2.3e-146 523.5 642 48.8
SEGI_13209 Sequoiadendron giganteum HOM05D003743 ORTHO05D004311 4.3e-145 519.2 645 50.1
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.1e-143 514.6 650 49.8
Lalb_Chr04g0260391 Lupinus albus HOM05D003743 ORTHO05D004311 5.2e-143 512.3 666 47.3
TPR.G30857 Trifolium pratense HOM05D003743 ORTHO05D004311 5.8e-142 508.8 658 50.8
Aqoxy3G03252 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 3.7e-141 506.1 658 49.1
Glyma.03G230500 Glycine max HOM05D003743 ORTHO05D004311 3.7e-141 506.1 674 49.0
Medtr7g099060 Medicago truncatula HOM05D003743 ORTHO05D004311 1.1e-140 504.6 647 50.5
Zm00001eb410600 Zea mays HOM05D003743 ORTHO05D004311 7.0e-140 501.9 653 49.2
Zm00001eb137720 Zea mays HOM05D003743 ORTHO05D004311 1.7e-138 497.3 653 48.7
Psat7g225840 Pisum sativum HOM05D003743 ORTHO05D004311 2.1e-136 490.3 666 48.2
Ca_20186_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 1.4e-135 487.6 679 47.6
arahy.Tifrunner.gnm1.ann1.58ANB0 Arachis hypogaea HOM05D003743 ORTHO05D004311 2.6e-134 483.4 653 48.9
AUR62014784 Chenopodium quinoa HOM05D003743 ORTHO05D004311 5.8e-134 482.3 648 48.6
TPR.G34103 Trifolium pratense HOM05D003743 ORTHO05D004311 1.3e-133 481.1 670 48.5
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.7e-133 480.7 651 47.2
Os12g0535900 Oryza sativa ssp. japonica HOM05D003743 ORTHO05D004311 3.2e-132 476.5 601 50.9
Lj1g0026238 Lotus japonicus HOM05D003743 ORTHO05D004311 1.2e-131 474.6 648 45.8
MBI16_g34928_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 8.6e-130 468.4 636 50.5
EL10Ac8g18529 Beta vulgaris HOM05D003743 ORTHO05D004311 1.6e-128 464.2 507 54.0
Sc06g0009130 Simmondsia chinensis HOM05D003743 ORTHO05D004311 2.8e-128 463.4 642 47.0
Medtr4g032885 Medicago truncatula HOM05D003743 ORTHO05D004311 2.2e-125 453.8 661 46.3
AagrBONN_evm.TU.Sc2ySwM_368.1522 Anthoceros agrestis HOM05D003743 ORTHO05D004311 6.0e-115 419.1 661 44.8
Mapoly0001s0024 Marchantia polymorpha HOM05D003743 ORTHO05D004311 1.1e-108 398.3 600 46.0
Pp3c12_17420 Physcomitrium patens HOM05D003743 ORTHO05D004311 1.4e-103 381.3 606 43.1
Actinidia05611 Actinidia chinensis HOM05D003743 ORTHO05D004311 4.5e-94 349.7 401 54.9
BolC1t03734H Brassica oleracea HOM05D003743 ORTHO05D004311 3.5e-91 340.1 417 52.3
Glyma.13G060000 Glycine max HOM05D003743 ORTHO05D004311 5.7e-89 332.8 398 50.8
FvH4_6g03621 Fragaria vesca HOM05D003743 ORTHO05D004311 4.8e-88 329.7 399 52.9
Oeu016117.1 Olea europaea HOM05D003743 ORTHO05D004311 1.4e-84 318.2 618 42.4
Mapoly0009s0176 Marchantia polymorpha HOM05D003743 ORTHO05D004311 3.6e-83 313.5 666 39.6
A03p68920 Brassica napus HOM05D003743 ORTHO05D004311 1.7e-80 304.7 632 41.1
SMO118G0429 Selaginella moellendorffii HOM05D003743 ORTHO05D004311 9.1e-79 298.9 545 40.2
ECA248G2279 Erigeron canadensis HOM05D003743 ORTHO05D004311 1.9e-76 291.2 383 48.0
GSVIVG01006453001 Vitis vinifera HOM05D003743 ORTHO05D004311 1.4e-74 285.0 229 68.1
Lj1P877T22 Lonicera japonica HOM05D003743 ORTHO05D004311 7.0e-71 272.7 296 53.7
BraSC39t46172Z Brassica rapa HOM05D003743 ORTHO05D004311 1.8e-66 258.1 275 57.8
CBR_g30024 Chara braunii HOM05D003743 ORTHO05D004311 2.7e-59 234.2 621 35.6
Zm00001eb087640 Zea mays HOM05D003743 ORTHO05D004311 1.1e-52 212.2 256 46.5
Lalb_Chr20g0113451 Lupinus albus HOM05D003743 ORTHO05D004311 2.2e-32 144.8 119 57.1
FvH4_6g03622 Fragaria vesca HOM05D003743 ORTHO05D004311 3.0e-29 134.4 77 84.4
SGA_v2.0_scaffold49G18283 Striga asiatica HOM05D003743 ORTHO05D004311 2.0e-25 121.7 390 26.4
Aqoxy3G03215 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 2.6e-25 121.3 109 54.1
EL10Ac4g08952 Beta vulgaris HOM05D003743 ORTHO05D004311 5.8e-25 120.2 138 51.4
ECA246G3327 Erigeron canadensis HOM05D001482 ORTHO05D001499 1.2e-22 112.5 79 69.6
MBI04_g35990_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 1.3e-21 109.0 220 42.7
Aqoxy3G03213 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 2.8e-19 101.3 74 68.9
MD05G1317500 Malus domestica HOM05D003743 ORTHO05D004311 6.8e-18 96.7 125 52.0
Rhsim02G0125200 Rhododendron simsii HOM05D003743 ORTHO05D004311 8.9e-18 96.3 61 67.2
Aqoxy3G03214 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 1.1e-15 89.4 78 64.1
Cre03.g196450 Chlamydomonas reinhardtii HOM05D003743 ORTHO05D004311 1.6e-14 85.5 468 28.0
EL10Ac5g12107 Beta vulgaris HOM05D003743 ORTHO05D004311 1.2e-11 75.9 60 63.3
PRCOL_00005809 Prasinoderma coloniale HOM05D003743 ORTHO05D004311 6.4e-08 63.5 270 26.3
Nitab4.5_0000556g0130 Nicotiana tabacum HOM05D002396 ORTHO05D002779 3.5e-06 57.8 98 51.0


User provided reference genes

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