Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40307 Sequoiadendron giganteum HOM05D003226 ORTHO05D011023 7.1e-66 253.8 132 100.0
SEGI_12690 Sequoiadendron giganteum HOM05D003226 ORTHO05D005723 3.0e-64 248.4 129 100.0
SGA_v2.0_scaffold499G52482 Striga asiatica HOM05D003226 ORTHO05D005723 6.7e-08 61.2 133 30.1
AT5G48600 Arabidopsis thaliana HOM05D003226 ORTHO05D005723 1.2e-07 60.5 76 39.5
Eucgr.I01943 Eucalyptus grandis HOM05D003226 ORTHO05D005723 1.2e-07 60.5 133 30.1
BcaC06g33656 Brassica carinata HOM05D003226 ORTHO05D005723 1.5e-07 60.1 135 29.6
A06p40240 Brassica napus HOM05D003226 ORTHO05D005723 1.5e-07 60.1 135 29.6
C07p37860 Brassica napus HOM05D003226 ORTHO05D005723 1.5e-07 60.1 135 29.6
BolC7t44308H Brassica oleracea HOM05D003226 ORTHO05D005723 1.5e-07 60.1 135 29.6
BraA06t26939Z Brassica rapa HOM05D003226 ORTHO05D005723 1.5e-07 60.1 135 29.6
PSO170G5698 Papaver somniferum HOM05D003226 ORTHO05D005723 1.5e-07 60.1 141 30.5
Sp2g17560 Schrenkiella parvula HOM05D003226 ORTHO05D005723 1.5e-07 60.1 137 29.2
Carub.0005s0749 Capsella rubella HOM05D003226 ORTHO05D005723 2.0e-07 59.7 135 29.6
AL8G21600 Arabidopsis lyrata HOM05D003226 ORTHO05D005723 2.6e-07 59.3 135 29.6
EL10Ac2g02987 Beta vulgaris HOM05D003226 ORTHO05D005723 2.6e-07 59.3 133 29.3
CARHR037400 Cardamine hirsuta HOM05D003226 ORTHO05D005723 2.6e-07 59.3 76 38.2
Thhalv10003529m.g Eutrema salsugineum HOM05D003226 ORTHO05D005723 2.6e-07 59.3 135 29.6
THA.LOC104805468 Tarenaya hassleriana HOM05D003226 ORTHO05D005723 2.6e-07 59.3 134 29.9
Aqoxy6G02361 Aquilegia oxysepala HOM05D003226 ORTHO05D005723 3.3e-07 58.9 75 38.7
PSO017G5293 Papaver somniferum HOM05D003226 ORTHO05D005723 3.3e-07 58.9 133 30.1
Lj7C393G0 Lonicera japonica HOM05D003226 ORTHO05D005723 5.7e-07 58.2 134 29.1
Prupe.3G267300 Prunus persica HOM05D003226 ORTHO05D005723 5.7e-07 58.2 75 38.7
VMungo0464G1600 Vigna mungo HOM05D003226 ORTHO05D005723 5.7e-07 58.2 76 38.2
Aqoxy5G00799 Aquilegia oxysepala HOM05D003226 ORTHO05D005723 7.5e-07 57.8 136 27.9
AUR62029891 Chenopodium quinoa HOM05D003226 ORTHO05D005723 7.5e-07 57.8 133 28.6
AUR62034416 Chenopodium quinoa HOM05D003226 ORTHO05D005723 7.5e-07 57.8 133 28.6
Glyma.19G022800 Glycine max HOM05D003226 ORTHO05D005723 7.5e-07 57.8 76 38.2
Rhsim07G0120700 Rhododendron simsii HOM05D003226 ORTHO05D005723 7.5e-07 57.8 76 36.8
Rhsim10G0039000 Rhododendron simsii HOM05D003226 ORTHO05D005723 7.5e-07 57.8 74 39.2
vmacro05694 Vaccinium macrocarpon HOM05D003226 ORTHO05D005723 7.5e-07 57.8 74 39.2
Aa31LG2G4270 Aethionema arabicum HOM05D003226 ORTHO05D005723 9.7e-07 57.4 131 29.8
Aqoxy5G00921 Aquilegia oxysepala HOM05D003226 ORTHO05D005723 9.7e-07 57.4 75 37.3
CANSAT64G2675 Cannabis sativa HOM05D003226 ORTHO05D005723 9.7e-07 57.4 75 38.7
Cfa007554 Carpinus fangiana HOM05D003226 ORTHO05D005723 9.7e-07 57.4 76 38.2
HanXRQChr15g0473961 Helianthus annuus HOM05D003226 ORTHO05D005723 9.7e-07 57.4 133 27.8
Phvul.004G029000 Phaseolus vulgaris HOM05D003226 ORTHO05D005723 9.7e-07 57.4 75 38.7
Hund08915 Selenicereus undatus HOM05D003226 ORTHO05D005723 9.7e-07 57.4 131 29.0
GSVIVG01011408001 Vitis vinifera HOM05D003226 ORTHO05D005723 9.7e-07 57.4 75 38.7
arahy.Tifrunner.gnm1.ann1.3W1S0R Arachis hypogaea HOM05D004102 ORTHO05D005307 1.3e-06 57.0 122 32.8
Cpa.g.sc140.54 Carica papaya HOM05D003226 ORTHO05D005723 1.3e-06 57.0 72 38.9
FvH4_2g39941 Fragaria vesca HOM05D003226 ORTHO05D005723 1.3e-06 57.0 74 39.2
FAN15G3277 Fragaria x ananassa HOM05D003226 ORTHO05D005723 1.3e-06 57.0 74 39.2
FAN20G3149 Fragaria x ananassa HOM05D003226 ORTHO05D005723 1.3e-06 57.0 74 39.2
Manes.02G046500 Manihot esculenta HOM05D003226 ORTHO05D005723 1.3e-06 57.0 74 39.2
Potri.017G083200 Populus trichocarpa HOM05D003226 ORTHO05D005723 1.3e-06 57.0 135 28.9
Sabra17G0073700 Salix brachista HOM05D003226 ORTHO05D005723 1.3e-06 57.0 135 28.9
Sed0013037 Sechium edule HOM05D003226 ORTHO05D005723 1.3e-06 57.0 136 27.9
TAR381G0539 Trochodendron aralioides HOM05D003226 ORTHO05D005723 1.3e-06 57.0 74 39.2
unitig_899.g15524 Utricularia gibba HOM05D003226 ORTHO05D005723 1.3e-06 57.0 72 40.3
Cc07_g03380 Coffea canephora HOM05D003226 ORTHO05D005723 1.7e-06 56.6 74 39.2
FvH4_4g18080 Fragaria vesca HOM05D003226 ORTHO05D005723 1.7e-06 56.6 75 40.0
Glyma.13G062800 Glycine max HOM05D003226 ORTHO05D005723 1.7e-06 56.6 135 27.4
Nitab4.5_0026203g0010 Nicotiana tabacum HOM05D003226 ORTHO05D005723 1.7e-06 56.6 135 28.9
QL02p063973 Quercus lobata HOM05D003226 ORTHO05D005723 1.7e-06 56.6 135 28.1
Zm00001eb291710 Zea mays HOM05D003226 ORTHO05D005723 1.7e-06 56.6 71 38.0
Actinidia06098 Actinidia chinensis HOM05D003226 ORTHO05D005723 2.2e-06 56.2 75 37.3
ATR0605G313 Amborella trichopoda HOM05D003226 ORTHO05D005723 2.2e-06 56.2 139 28.1
CAN.G206.153 Capsicum annuum HOM05D003226 ORTHO05D005723 2.2e-06 56.2 69 40.6
AUR62039793 Chenopodium quinoa HOM05D003226 ORTHO05D005723 2.2e-06 56.2 129 31.8
Dinv33760 Davidia involucrata HOM05D003226 ORTHO05D005723 2.2e-06 56.2 75 37.3
Lalb_Chr21g0318701 Lupinus albus HOM05D003226 ORTHO05D005723 2.2e-06 56.2 71 38.0
Medtr8g037325 Medicago truncatula HOM05D002696 ORTHO05D003940 2.2e-06 56.2 119 38.7
Nitab4.5_0000274g0210 Nicotiana tabacum HOM05D003226 ORTHO05D005723 2.2e-06 56.2 135 28.9
Peaxi162Scf00011g02911 Petunia axillaris HOM05D003226 ORTHO05D005723 2.2e-06 56.2 74 37.8
PGR004G1048 Punica granatum HOM05D003226 ORTHO05D005723 2.2e-06 56.2 72 38.9
Sc14g0005870 Simmondsia chinensis HOM05D003226 ORTHO05D005723 2.2e-06 56.2 72 38.9
Solyc02g087980.3 Solanum lycopersicum HOM05D003226 ORTHO05D005723 2.2e-06 56.2 69 40.6
Sopen02g032720 Solanum pennellii HOM05D003226 ORTHO05D005723 2.2e-06 56.2 69 40.6
PGSC0003DMG400001326 Solanum tuberosum HOM05D003226 ORTHO05D005723 2.2e-06 56.2 74 39.2
ATR0618G100 Amborella trichopoda HOM05D002696 ORTHO05D003940 2.8e-06 55.8 119 38.7
CDE04G2390 Ceratophyllum demersum HOM05D003226 ORTHO05D005723 2.8e-06 55.8 71 39.4
Ciclev10010934m.g Citrus clementina HOM05D003226 ORTHO05D005723 2.8e-06 55.8 71 39.4
Migut.H00924 Erythranthe guttata HOM05D003226 ORTHO05D005723 2.8e-06 55.8 133 28.6
Lj4g0003862 Lotus japonicus HOM05D003226 ORTHO05D005723 2.8e-06 55.8 74 37.8
Oeu035695.1 Olea europaea HOM05D003226 ORTHO05D005723 2.8e-06 55.8 74 37.8
Psat4g148760 Pisum sativum HOM05D002696 ORTHO05D003940 2.8e-06 55.8 119 38.7
arahy.Tifrunner.gnm1.ann1.KRWI3G Arachis hypogaea HOM05D004102 ORTHO05D005307 3.7e-06 55.5 122 32.8
arahy.Tifrunner.gnm1.ann1.R713I2 Arachis hypogaea HOM05D003226 ORTHO05D005723 3.7e-06 55.5 74 39.2
Cre12.g493400 Chlamydomonas reinhardtii HOM05D003226 ORTHO05D005723 3.7e-06 55.5 137 31.4
CsaV3_5G027630 Cucumis sativus L. HOM05D003226 ORTHO05D005723 3.7e-06 55.5 135 28.1
FAN10G0424 Fragaria x ananassa HOM05D002696 ORTHO05D003940 3.7e-06 55.5 119 36.1
MD02G1198100 Malus domestica HOM05D003226 ORTHO05D005723 3.7e-06 55.5 74 37.8
Psat4g106040 Pisum sativum HOM05D003226 ORTHO05D005723 3.7e-06 55.5 134 27.6
RcHm_v2.0_Chr6g0300801 Rosa chinensis HOM05D003226 ORTHO05D005723 3.7e-06 55.5 74 37.8
RcHm_v2.0_Chr7g0223741 Rosa chinensis HOM05D003226 ORTHO05D005723 3.7e-06 55.5 69 39.1
SMO076G0001 Selaginella moellendorffii HOM05D002696 ORTHO05D003940 3.7e-06 55.5 119 37.8
Ah.10g031620 Amaranthus hybridus HOM05D003226 ORTHO05D005723 4.8e-06 55.1 131 29.0
CSS0044326 Camellia sinensis var. sinensis HOM05D003226 ORTHO05D005723 4.8e-06 55.1 73 37.0
FvH4_5g30910 Fragaria vesca HOM05D003226 ORTHO05D005723 4.8e-06 55.1 133 29.3
FAN18G4273 Fragaria x ananassa HOM05D003226 ORTHO05D005723 4.8e-06 55.1 133 29.3
Pp3c13_8840 Physcomitrium patens HOM05D002696 ORTHO05D003940 4.8e-06 55.1 119 38.7
SalBow1G4412 Salvia bowleyana HOM05D003226 ORTHO05D005723 4.8e-06 55.1 72 37.5
TPR.G36529 Trifolium pratense HOM05D003226 ORTHO05D005723 4.8e-06 55.1 71 36.6
Aqoxy2G00559 Aquilegia oxysepala HOM05D002696 ORTHO05D003940 6.3e-06 54.7 119 37.8
MELO3C022910.2 Cucumis melo HOM05D003226 ORTHO05D005723 6.3e-06 54.7 135 28.1
SGA_v2.0_scaffold1G00329 Striga asiatica HOM05D003226 ORTHO05D005723 6.3e-06 54.7 133 27.8
FAN03G1343 Fragaria x ananassa HOM05D002696 ORTHO05D003940 8.2e-06 54.3 120 37.5


User provided reference genes

Program Settings